| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is 15899727
Identifier: 15899727
GI number: 15899727
Start: 2768103
End: 2769890
Strand: Reverse
Name: 15899727
Synonym: SSO3021
Alternate gene names: NA
Gene position: 2769890-2768103 (Counterclockwise)
Preceding gene: 15899728
Following gene: 15899723
Centisome position: 92.57
GC content: 35.91
Gene sequence:
>1788_bases GTGATAAGTATGAAGGAGTTTAAATTAGCGGTTTACGTTACGGCTCCAACTTTGAGGGGTCTTAACGAGGAAAGGATCAA GAAGCTTATTGAAAAATTTAAAGAATTAGGAGTAGTTAAAATCTATCTAGAAAATTATAGAGATGGAATAATGCTAGATG TTAACACAATGATTAAGTTTAAAGAGGTTTTTGAGAGGGAGTTTGAAGTTGCTGGAGGGATGGCAATTGGTACATGGGGT GAGGGTTGGGGTGAAATGGAGAATTATGGTTTTAAAGTAGCTTGTATTGCAGATGAAAGAAATAGGGAGATGGTAAAAAA CGTAGTTGAAGAGCAAGCAAAGGTATTTGACGAGATAATTATTGATGACTTTTGGGCTAATTGGTGCCATTCTGAAAAGG ATGTAAAACTGTTTAACTCAATGTATGGGGTTAATTTCACTAAAGGTACATTACTTAAAATGTTGAGAGATCCAGTTATA TCGCGCTTATGGTGTGAGTACTCTTCCTCTCTAGTTTATAACGCTTCAAGGGATTATGTTGTAAAACCAGCAAAAAATGT AAACGAAAAAGTCAAGATAACTCTAAAGGTCGCTGAGTGGAGGGAAGACTTCTATCATAGAGGACTTAAATTAGATAAGT TAGCTGAAATCTTCGATAACATTTATGTTGGAACTGAGGCTAGGGAATATACGGCAAGATATGGTTCATTGTACATAGTT GATTACGTTAAAGGTCTAGTCGGTGATAAATTAAAGGGTGTATGGTTTGATACTTTCATAGGTGGAGAAGGTGGAGATTA CGGTAGTTTTAAAACATATTTACAGCAATTTATCTTGAGCGCATTTGGTCTCACAGAGGAAATTACACTTTTCGAGGCTG GAGATATTTTAGACCCAGAGAGAAGGAGTTTGTTTGAAAGTATTATGGAAAATAAGGAAAAGGTACAGAGGTGGAGGGAA GACATTAGGGAATACGCCTCTATAGGTTTGAAGAGAATACCATTACAGCATTTCATGACTCAAAGGTTTGATAAATACGT AGAGGACCATCTAGGAATAATTGGAATACCGCTAGAGGTTTCTAATGTTGTAAATCCAAGTGATATATTGCTCATAACTG AGTCAGATATTTACCATCTAGATATTGTGGATTTACTTAATAGGGGAGTTAACTTAATGTTTACAGCAAGTGCAGCTAAA AAGCTTATTGAAGTCTTGGGGGATACTGCACTGAAAATTCTTGGTGTCGGTAACTTGATTTACGATAGTGTTAGTGTCAA TGCGTTAACCAGGGATGGGAAAACGTTCTATTGGTCATATTACAAGAGGCAAGCCAATTTCCCTGTAGGACCTATATTTT CATTAAACGGAGCTACGCCAATCCTTTACGCCTATAACGGTGTCGAATTGCACCCAGTAGTCTTTCAGAACACTTACTCT AACTCTAAAGTTTACGTCCTATCACTTACAACTTACCTACCATATCTGATTTCAGAGTTCTACCCTAGTGTTGCAAGGCA GATAATAAGGGATATTGTTGGAGACCATATCGGAATAAGGGCTATCGCTACTTATCCCTTCTTATTTTCATTAATAATTA AAAGGGATGGACTGGTAACAGTATTAAATCTAAATGACTTTCCAATTAGGCTAACATTAAGTGTAGATCCCAAAAGGTAC AAAATAAATAATATAGAAGGTATGAAAGTATTGCAATCTAATGAAAATGAGATTAGAATAAGATTAAAAGAAAACTCATT TGGTATAGTGAGACTTGAGAAAGTTTAG
Upstream 100 bases:
>100_bases AGGGTATTGAGCACACGAAGCCAGATGTCGAAATAGAATATAACGGTAAGGAAACTATTACAGTTAAGAGGGGTTAGTAT TTTAATTTTCTAATCGTTGT
Downstream 100 bases:
>100_bases TGCCTTAATGGCTTTACTGGAGGTACGCTATTTAAGTGCTCTATTTCATCAGTTATTGCGCCATTTGTGGCGATTTCCCT ATATACTAGTGCTGAGGGTC
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 595; Mature: 595
Protein sequence:
>595_residues MISMKEFKLAVYVTAPTLRGLNEERIKKLIEKFKELGVVKIYLENYRDGIMLDVNTMIKFKEVFEREFEVAGGMAIGTWG EGWGEMENYGFKVACIADERNREMVKNVVEEQAKVFDEIIIDDFWANWCHSEKDVKLFNSMYGVNFTKGTLLKMLRDPVI SRLWCEYSSSLVYNASRDYVVKPAKNVNEKVKITLKVAEWREDFYHRGLKLDKLAEIFDNIYVGTEAREYTARYGSLYIV DYVKGLVGDKLKGVWFDTFIGGEGGDYGSFKTYLQQFILSAFGLTEEITLFEAGDILDPERRSLFESIMENKEKVQRWRE DIREYASIGLKRIPLQHFMTQRFDKYVEDHLGIIGIPLEVSNVVNPSDILLITESDIYHLDIVDLLNRGVNLMFTASAAK KLIEVLGDTALKILGVGNLIYDSVSVNALTRDGKTFYWSYYKRQANFPVGPIFSLNGATPILYAYNGVELHPVVFQNTYS NSKVYVLSLTTYLPYLISEFYPSVARQIIRDIVGDHIGIRAIATYPFLFSLIIKRDGLVTVLNLNDFPIRLTLSVDPKRY KINNIEGMKVLQSNENEIRIRLKENSFGIVRLEKV
Sequences:
>Translated_595_residues MISMKEFKLAVYVTAPTLRGLNEERIKKLIEKFKELGVVKIYLENYRDGIMLDVNTMIKFKEVFEREFEVAGGMAIGTWG EGWGEMENYGFKVACIADERNREMVKNVVEEQAKVFDEIIIDDFWANWCHSEKDVKLFNSMYGVNFTKGTLLKMLRDPVI SRLWCEYSSSLVYNASRDYVVKPAKNVNEKVKITLKVAEWREDFYHRGLKLDKLAEIFDNIYVGTEAREYTARYGSLYIV DYVKGLVGDKLKGVWFDTFIGGEGGDYGSFKTYLQQFILSAFGLTEEITLFEAGDILDPERRSLFESIMENKEKVQRWRE DIREYASIGLKRIPLQHFMTQRFDKYVEDHLGIIGIPLEVSNVVNPSDILLITESDIYHLDIVDLLNRGVNLMFTASAAK KLIEVLGDTALKILGVGNLIYDSVSVNALTRDGKTFYWSYYKRQANFPVGPIFSLNGATPILYAYNGVELHPVVFQNTYS NSKVYVLSLTTYLPYLISEFYPSVARQIIRDIVGDHIGIRAIATYPFLFSLIIKRDGLVTVLNLNDFPIRLTLSVDPKRY KINNIEGMKVLQSNENEIRIRLKENSFGIVRLEKV >Mature_595_residues MISMKEFKLAVYVTAPTLRGLNEERIKKLIEKFKELGVVKIYLENYRDGIMLDVNTMIKFKEVFEREFEVAGGMAIGTWG EGWGEMENYGFKVACIADERNREMVKNVVEEQAKVFDEIIIDDFWANWCHSEKDVKLFNSMYGVNFTKGTLLKMLRDPVI SRLWCEYSSSLVYNASRDYVVKPAKNVNEKVKITLKVAEWREDFYHRGLKLDKLAEIFDNIYVGTEAREYTARYGSLYIV DYVKGLVGDKLKGVWFDTFIGGEGGDYGSFKTYLQQFILSAFGLTEEITLFEAGDILDPERRSLFESIMENKEKVQRWRE DIREYASIGLKRIPLQHFMTQRFDKYVEDHLGIIGIPLEVSNVVNPSDILLITESDIYHLDIVDLLNRGVNLMFTASAAK KLIEVLGDTALKILGVGNLIYDSVSVNALTRDGKTFYWSYYKRQANFPVGPIFSLNGATPILYAYNGVELHPVVFQNTYS NSKVYVLSLTTYLPYLISEFYPSVARQIIRDIVGDHIGIRAIATYPFLFSLIIKRDGLVTVLNLNDFPIRLTLSVDPKRY KINNIEGMKVLQSNENEIRIRLKENSFGIVRLEKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68477; Mature: 68477
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISMKEFKLAVYVTAPTLRGLNEERIKKLIEKFKELGVVKIYLENYRDGIMLDVNTMIKF CCCCEEEEEEEEEECHHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEHHHHHHH KEVFEREFEVAGGMAIGTWGEGWGEMENYGFKVACIADERNREMVKNVVEEQAKVFDEII HHHHHHHHHHCCCEEEECCCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH IDDFWANWCHSEKDVKLFNSMYGVNFTKGTLLKMLRDPVISRLWCEYSSSLVYNASRDYV HHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEE VKPAKNVNEKVKITLKVAEWREDFYHRGLKLDKLAEIFDNIYVGTEAREYTARYGSLYIV ECCCCCCCCEEEEEEEEHHHHHHHHHCCCCHHHHHHHHHCCEECCCHHHHHHHCCCEEEH DYVKGLVGDKLKGVWFDTFIGGEGGDYGSFKTYLQQFILSAFGLTEEITLFEAGDILDPE HHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH RRSLFESIMENKEKVQRWREDIREYASIGLKRIPLQHFMTQRFDKYVEDHLGIIGIPLEV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCEEEECEEC SNVVNPSDILLITESDIYHLDIVDLLNRGVNLMFTASAAKKLIEVLGDTALKILGVGNLI CCCCCCCCEEEEECCCEEEEEHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHH YDSVSVNALTRDGKTFYWSYYKRQANFPVGPIFSLNGATPILYAYNGVELHPVVFQNTYS HCCCEEEEEECCCCEEEEEEEHHCCCCCCCCEEECCCCCEEEEEECCEEEEEEEEECCCC NSKVYVLSLTTYLPYLISEFYPSVARQIIRDIVGDHIGIRAIATYPFLFSLIIKRDGLVT CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEE VLNLNDFPIRLTLSVDPKRYKINNIEGMKVLQSNENEIRIRLKENSFGIVRLEKV EEECCCCCEEEEEEECCCEEEECCCCCEEHEECCCCEEEEEEECCCCCEEEEECC >Mature Secondary Structure MISMKEFKLAVYVTAPTLRGLNEERIKKLIEKFKELGVVKIYLENYRDGIMLDVNTMIKF CCCCEEEEEEEEEECHHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEHHHHHHH KEVFEREFEVAGGMAIGTWGEGWGEMENYGFKVACIADERNREMVKNVVEEQAKVFDEII HHHHHHHHHHCCCEEEECCCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH IDDFWANWCHSEKDVKLFNSMYGVNFTKGTLLKMLRDPVISRLWCEYSSSLVYNASRDYV HHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEE VKPAKNVNEKVKITLKVAEWREDFYHRGLKLDKLAEIFDNIYVGTEAREYTARYGSLYIV ECCCCCCCCEEEEEEEEHHHHHHHHHCCCCHHHHHHHHHCCEECCCHHHHHHHCCCEEEH DYVKGLVGDKLKGVWFDTFIGGEGGDYGSFKTYLQQFILSAFGLTEEITLFEAGDILDPE HHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH RRSLFESIMENKEKVQRWREDIREYASIGLKRIPLQHFMTQRFDKYVEDHLGIIGIPLEV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCEEEECEEC SNVVNPSDILLITESDIYHLDIVDLLNRGVNLMFTASAAKKLIEVLGDTALKILGVGNLI CCCCCCCCEEEEECCCEEEEEHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHH YDSVSVNALTRDGKTFYWSYYKRQANFPVGPIFSLNGATPILYAYNGVELHPVVFQNTYS HCCCEEEEEECCCCEEEEEEEHHCCCCCCCCEEECCCCCEEEEEECCEEEEEEEEECCCC NSKVYVLSLTTYLPYLISEFYPSVARQIIRDIVGDHIGIRAIATYPFLFSLIIKRDGLVT CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEE VLNLNDFPIRLTLSVDPKRYKINNIEGMKVLQSNENEIRIRLKENSFGIVRLEKV EEECCCCCEEEEEEECCCEEEECCCCCEEHEECCCCEEEEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10801892; 11427726; 2121622 [H]