Click here to switch to the map view.

The map label for this gene is ycjS [C]

Identifier: 15899715

GI number: 15899715

Start: 2750583

End: 2751812

Strand: Direct

Name: ycjS [C]

Synonym: SSO3008

Alternate gene names: 15899715

Gene position: 2750583-2751812 (Clockwise)

Preceding gene: 15899714

Following gene: 15899716

Centisome position: 91.92

GC content: 39.11

Gene sequence:

>1230_bases
ATGACTCTAGGTATTGCATTCGTAGGAAGTGGGTTTTCGGCTAAGTTTCATTTAAGGGGATTAGTGGGAGTTAGAAATGT
AGAAGTCAAGGGAGTATATTCAAGAAATCTAAACTCATCTAAAGAATTCGCTATGTTATCTGAGCAATTAGGATTAGGGA
AACCTAAAGTGTATAGTGATATAAGTAAAATGCTCTCTGATAAGGAGATTAATGCAGTATGGTTAACCGTTCCCAATGAC
GTACATTTAGAATACACAAAGTTAATTGCTGAAGAGGTTTCTCAAGGAAGGTCCAATATACACGGAATAACGATAGAGAA
ACCACTGGCAAGAAACGTGAAGGAAGCTAAGGAGATGATTAGATTAGTAGAGAAGGCTGGGCTATTGCATGGATATTTGG
AGAATCAAATCTTTATGCCATCTGTAGTGAGGGCTAGAGAAGCTATTTGGGAGATTGGATCGAGGAATTCTGGAAGGCCA
TATTTAGCAAGAGCAGCTGAAGAGCACTCTGGTCCTCATAATAGCTGGTTTTGGAGACCGACTATTTCCGGTGGAGGGGC
ATTAATAGATATGACTTGCCATAGTTTAGAGGCAACTAGATTTTTACTTACTGACCCAGCAAAGACTAAATCCTCACTTA
AGCCGAAAACTGTATATGCGGAGACAAAAACGTTGAAGTGGAATAAGAAAGAGTACGCTCAATATTTAAAGGAAAAGTAT
AACGTGGACTTCTTAAAGGAACCGGCTGAGGATTATGCACTAACCATAGTAACTTATGAGGACGATTTAGGTAATTCTGT
ATTGGCGGAGACTAGAACTTCGTGGAACTATGTTGGGCCTGGGCTTAGGTTATCAGTAGAAGTGTTAGGACCAGAATACA
GTGTTAATATCAATACTCTACAATCTGAACTTTCAGTGTTCTTTAGCAGGAACATTAAACTTCCCCAGTCTGAAGCTTTC
GTCGAGAAACAAAATGCTGATCAAGGACTTATGCCGATTATACTTGATGAGGCAGTGGTTTACGGATATCAAGGAGAGGA
TAGGCATATGGTTGAGTCTTTTATATCCCGTAAGATGCCTTTTGAGAATTGGTATGATGGATTATTAATAGTCCAACTTA
TGATGCATGCCTACCTTTCAGCTGAAAATGGGAGGAAGATTAGTTTTGATCCGCAAAAAGTAGAGGACTTCATACCTAAA
GTAGCTAGAGGATTATATTCTGCCTTTTAA

Upstream 100 bases:

>100_bases
ATATGGATGCTTGCCAAGGAGTGGTTAGGGCTAAATCTGGTTGCTTAATAAGAGTCTAACCGATACCAATCTTTTTTAAT
TATTATTATAAACTTATTTT

Downstream 100 bases:

>100_bases
AAAAATACATTTAATAGCATAACTGATAAGTTTGGAGTTTCTATACTGTAATTACAGAAAATGTACTTTTTACTTAGTAT
GATGAAAGTAAAGTTTTTAA

Product: dehydrogenase, putative

Products: NA

Alternate protein names: Oxidoreductase Domain-Containing Protein; Dehydrogenase; Oxidoreductase; Dehydrogenase-Like Protein; Oxidoreductase-Like; NADH-Dependent Dehydrogenase; Oxidoreductase Family Protein; Dehydrogenases And Related Proteins; Oxidoreductase Gfo/Idh/Moca Family; Oxidoreductase-Like Protein; Oxidoreductase YcjS

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MTLGIAFVGSGFSAKFHLRGLVGVRNVEVKGVYSRNLNSSKEFAMLSEQLGLGKPKVYSDISKMLSDKEINAVWLTVPND
VHLEYTKLIAEEVSQGRSNIHGITIEKPLARNVKEAKEMIRLVEKAGLLHGYLENQIFMPSVVRAREAIWEIGSRNSGRP
YLARAAEEHSGPHNSWFWRPTISGGGALIDMTCHSLEATRFLLTDPAKTKSSLKPKTVYAETKTLKWNKKEYAQYLKEKY
NVDFLKEPAEDYALTIVTYEDDLGNSVLAETRTSWNYVGPGLRLSVEVLGPEYSVNINTLQSELSVFFSRNIKLPQSEAF
VEKQNADQGLMPIILDEAVVYGYQGEDRHMVESFISRKMPFENWYDGLLIVQLMMHAYLSAENGRKISFDPQKVEDFIPK
VARGLYSAF

Sequences:

>Translated_409_residues
MTLGIAFVGSGFSAKFHLRGLVGVRNVEVKGVYSRNLNSSKEFAMLSEQLGLGKPKVYSDISKMLSDKEINAVWLTVPND
VHLEYTKLIAEEVSQGRSNIHGITIEKPLARNVKEAKEMIRLVEKAGLLHGYLENQIFMPSVVRAREAIWEIGSRNSGRP
YLARAAEEHSGPHNSWFWRPTISGGGALIDMTCHSLEATRFLLTDPAKTKSSLKPKTVYAETKTLKWNKKEYAQYLKEKY
NVDFLKEPAEDYALTIVTYEDDLGNSVLAETRTSWNYVGPGLRLSVEVLGPEYSVNINTLQSELSVFFSRNIKLPQSEAF
VEKQNADQGLMPIILDEAVVYGYQGEDRHMVESFISRKMPFENWYDGLLIVQLMMHAYLSAENGRKISFDPQKVEDFIPK
VARGLYSAF
>Mature_408_residues
TLGIAFVGSGFSAKFHLRGLVGVRNVEVKGVYSRNLNSSKEFAMLSEQLGLGKPKVYSDISKMLSDKEINAVWLTVPNDV
HLEYTKLIAEEVSQGRSNIHGITIEKPLARNVKEAKEMIRLVEKAGLLHGYLENQIFMPSVVRAREAIWEIGSRNSGRPY
LARAAEEHSGPHNSWFWRPTISGGGALIDMTCHSLEATRFLLTDPAKTKSSLKPKTVYAETKTLKWNKKEYAQYLKEKYN
VDFLKEPAEDYALTIVTYEDDLGNSVLAETRTSWNYVGPGLRLSVEVLGPEYSVNINTLQSELSVFFSRNIKLPQSEAFV
EKQNADQGLMPIILDEAVVYGYQGEDRHMVESFISRKMPFENWYDGLLIVQLMMHAYLSAENGRKISFDPQKVEDFIPKV
ARGLYSAF

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 46205; Mature: 46074

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLGIAFVGSGFSAKFHLRGLVGVRNVEVKGVYSRNLNSSKEFAMLSEQLGLGKPKVYSD
CEEEEEEECCCCCEEEEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHH
ISKMLSDKEINAVWLTVPNDVHLEYTKLIAEEVSQGRSNIHGITIEKPLARNVKEAKEMI
HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHH
RLVEKAGLLHGYLENQIFMPSVVRAREAIWEIGSRNSGRPYLARAAEEHSGPHNSWFWRP
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEE
TISGGGALIDMTCHSLEATRFLLTDPAKTKSSLKPKTVYAETKTLKWNKKEYAQYLKEKY
ECCCCCEEEEEEHHHHHHCEEEEECCCHHHHCCCCCEEEEECCEECCCHHHHHHHHHHHC
NVDFLKEPAEDYALTIVTYEDDLGNSVLAETRTSWNYVGPGLRLSVEVLGPEYSVNINTL
CCCHHCCCCCCEEEEEEEECCCCCCHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEHHHH
QSELSVFFSRNIKLPQSEAFVEKQNADQGLMPIILDEAVVYGYQGEDRHMVESFISRKMP
HHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHEEHHHEEECCCCCCHHHHHHHHHHCCC
FENWYDGLLIVQLMMHAYLSAENGRKISFDPQKVEDFIPKVARGLYSAF
HHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLGIAFVGSGFSAKFHLRGLVGVRNVEVKGVYSRNLNSSKEFAMLSEQLGLGKPKVYSD
EEEEEEECCCCCEEEEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHH
ISKMLSDKEINAVWLTVPNDVHLEYTKLIAEEVSQGRSNIHGITIEKPLARNVKEAKEMI
HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHH
RLVEKAGLLHGYLENQIFMPSVVRAREAIWEIGSRNSGRPYLARAAEEHSGPHNSWFWRP
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEE
TISGGGALIDMTCHSLEATRFLLTDPAKTKSSLKPKTVYAETKTLKWNKKEYAQYLKEKY
ECCCCCEEEEEEHHHHHHCEEEEECCCHHHHCCCCCEEEEECCEECCCHHHHHHHHHHHC
NVDFLKEPAEDYALTIVTYEDDLGNSVLAETRTSWNYVGPGLRLSVEVLGPEYSVNINTL
CCCHHCCCCCCEEEEEEEECCCCCCHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEHHHH
QSELSVFFSRNIKLPQSEAFVEKQNADQGLMPIILDEAVVYGYQGEDRHMVESFISRKMP
HHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHEEHHHEEECCCCCCHHHHHHHHHHCCC
FENWYDGLLIVQLMMHAYLSAENGRKISFDPQKVEDFIPKVARGLYSAF
HHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA