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The map label for this gene is soxF

Identifier: 15899681

GI number: 15899681

Start: 2714884

End: 2715642

Strand: Reverse

Name: soxF

Synonym: SSO2971

Alternate gene names: NA

Gene position: 2715642-2714884 (Counterclockwise)

Preceding gene: 15899686

Following gene: 15899680

Centisome position: 90.76

GC content: 40.84

Gene sequence:

>759_bases
ATGATGAACAGAAGGACATTTTTGAGACTATATTTAGTGGTAGGAGCTGCAGTTGCAATAGCACCCTTAATAAAACCATT
AGCAGATTACGTAGGGTACTTCTACAATGAAATAGGCACCATGTCAAAGCAGTATTTAGTCGCAAATAACACTGATGGAT
TATCTGGGTTTCCTAAATATAGGATAGCTAATATTAAGGATATCCAGCAACAAGCGCAAAGTTCAGGGTGTCCAGTCTAC
TTTTTCGCTTATCCACTAACTAATGAACCTTGTTTCCTAGTGGACTTACAAGCACTATTGGGTCAACCGGTTCCAGAAAT
ACCAAATCCATATTACGGACAATATGCAGGCCCAATAGGGCAAATTAAAACCATACAAGGTGTAGGTCCAAATAACTCTA
TATACGCATTCTCTGACGTTTGCGTACATCTAGGTTGCCAACTCCCTGCACAAGTTTTAGTGACCTCTGAGAATAATCCG
GGTTTAGATGTGACAAATTCAGTCCTTCATTGCCCATGCCATGGCTCTCTTTACTCCTTAATGAAGGGTGGCGTAGTAGT
TGGGGGACCTGCCCCAAGACCTCTTCCTATAATTTTCTTAGAATATGACCAAAATACTGGAGACATATACGCAATAGGTA
CTAATGCTCCATATTTCAGTGCATCAATACCCAGAACTACTCCAGCTGATAACCTGCTTTACGATCCTAGATATAGTTAC
AGTGTACCCTCAAATCCGTCTTGTAGTAAGGGTGGTTAG

Upstream 100 bases:

>100_bases
TTATGTAGAGTATCATAATCATCTTCTATATTAAAGAATGTAAACATAAGTTAATAATGTTATAAGATAAAACTTAAATA
TCTTATTAAGATATAGTAGA

Downstream 100 bases:

>100_bases
CGTGGCAGATGAGCAAAGTAATGGTTTGTTCGATAGGTTTATGAAATGGTTAGATGATAGATTAGGGATTTATGGCCATA
CTCTAAGACCAGCACCTAGA

Product: quinol oxidase-2, Rieske iron-sulfur protein-2 (soxF)

Products: NA

Alternate protein names: Rieske Iron-Sulfur Protein; Rieske Iron-Sulfur Domain-Containing Protein; Rieske Iron-Sulfur

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MMNRRTFLRLYLVVGAAVAIAPLIKPLADYVGYFYNEIGTMSKQYLVANNTDGLSGFPKYRIANIKDIQQQAQSSGCPVY
FFAYPLTNEPCFLVDLQALLGQPVPEIPNPYYGQYAGPIGQIKTIQGVGPNNSIYAFSDVCVHLGCQLPAQVLVTSENNP
GLDVTNSVLHCPCHGSLYSLMKGGVVVGGPAPRPLPIIFLEYDQNTGDIYAIGTNAPYFSASIPRTTPADNLLYDPRYSY
SVPSNPSCSKGG

Sequences:

>Translated_252_residues
MMNRRTFLRLYLVVGAAVAIAPLIKPLADYVGYFYNEIGTMSKQYLVANNTDGLSGFPKYRIANIKDIQQQAQSSGCPVY
FFAYPLTNEPCFLVDLQALLGQPVPEIPNPYYGQYAGPIGQIKTIQGVGPNNSIYAFSDVCVHLGCQLPAQVLVTSENNP
GLDVTNSVLHCPCHGSLYSLMKGGVVVGGPAPRPLPIIFLEYDQNTGDIYAIGTNAPYFSASIPRTTPADNLLYDPRYSY
SVPSNPSCSKGG
>Mature_252_residues
MMNRRTFLRLYLVVGAAVAIAPLIKPLADYVGYFYNEIGTMSKQYLVANNTDGLSGFPKYRIANIKDIQQQAQSSGCPVY
FFAYPLTNEPCFLVDLQALLGQPVPEIPNPYYGQYAGPIGQIKTIQGVGPNNSIYAFSDVCVHLGCQLPAQVLVTSENNP
GLDVTNSVLHCPCHGSLYSLMKGGVVVGGPAPRPLPIIFLEYDQNTGDIYAIGTNAPYFSASIPRTTPADNLLYDPRYSY
SVPSNPSCSKGG

Specific function: Unknown

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27288; Mature: 27288

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNRRTFLRLYLVVGAAVAIAPLIKPLADYVGYFYNEIGTMSKQYLVANNTDGLSGFPKY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCE
RIANIKDIQQQAQSSGCPVYFFAYPLTNEPCFLVDLQALLGQPVPEIPNPYYGQYAGPIG
EECCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCC
QIKTIQGVGPNNSIYAFSDVCVHLGCQLPAQVLVTSENNPGLDVTNSVLHCPCHGSLYSL
CEEEEECCCCCCCEEEHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEECCCCCHHHHH
MKGGVVVGGPAPRPLPIIFLEYDQNTGDIYAIGTNAPYFSASIPRTTPADNLLYDPRYSY
HHCCEEEECCCCCCEEEEEEEECCCCCCEEEEECCCCEEECCCCCCCCCCCCEECCCCCC
SVPSNPSCSKGG
CCCCCCCCCCCC
>Mature Secondary Structure
MMNRRTFLRLYLVVGAAVAIAPLIKPLADYVGYFYNEIGTMSKQYLVANNTDGLSGFPKY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCE
RIANIKDIQQQAQSSGCPVYFFAYPLTNEPCFLVDLQALLGQPVPEIPNPYYGQYAGPIG
EECCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCC
QIKTIQGVGPNNSIYAFSDVCVHLGCQLPAQVLVTSENNPGLDVTNSVLHCPCHGSLYSL
CEEEEECCCCCCCEEEHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEECCCCCHHHHH
MKGGVVVGGPAPRPLPIIFLEYDQNTGDIYAIGTNAPYFSASIPRTTPADNLLYDPRYSY
HHCCEEEECCCCCCEEEEEEEECCCCCCEEEEECCCCEEECCCCCCCCCCCCEECCCCCC
SVPSNPSCSKGG
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA