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The map label for this gene is 15899636

Identifier: 15899636

GI number: 15899636

Start: 2672370

End: 2672780

Strand: Direct

Name: 15899636

Synonym: SSO2924

Alternate gene names: NA

Gene position: 2672370-2672780 (Clockwise)

Preceding gene: 15899635

Following gene: 15899639

Centisome position: 89.31

GC content: 51.09

Gene sequence:

>411_bases
TTGGAAAAGGCAGTTAACGAGGTCATACTATCCATGACTGGAACGAGGAAGGACGTTGCCAAGAGGCTCGTCTTGGGAGT
GGTTGTGGGAAGAAATGCTACCGAGATAGCTCAGGAGGCCGAGATGGACTACGAGACCGTGCTGAATAACTTGGACAAGG
CAGCTCAAGCCAAACTAATCGAGGTCGTGAAGAAGTTAGTCGGGGATCATCCTGTCCTTCTCATAATAGACGACACCCAC
GACCACAAGCTCTACGCTAGAGCCATGCCGGTCTCCAGAAACGGGGCACAGATCTTCTACTGCAGGGCGCACAAGAGGTT
CGAACCCGCGATCCAACTCCTTGTGATTGGCGTCAAGGATCTGGTGAACAACCAGATCTACGTCAGTATGGGAATCTCAT
TTTTTGCGTAA

Upstream 100 bases:

>100_bases
AAAATCCTGACAGCTCAAGAGGCCCATAAAAACTTTTTAAAATTAGAGCCTTTAATTTTGGTATGACCAAAGAGTCTGCG
AGGAGGAGTACTATAAGGCA

Downstream 100 bases:

>100_bases
AAAACGAGATGAATGAAATACAGAAAAAGTTGAGAGGATGAGAATTTCTGTAGAAAAGTTTGTATATACGAGGGCGAACC
TGAATGTATGAAGCATGAGA

Product: partial ORF in transposase ISC1217

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MEKAVNEVILSMTGTRKDVAKRLVLGVVVGRNATEIAQEAEMDYETVLNNLDKAAQAKLIEVVKKLVGDHPVLLIIDDTH
DHKLYARAMPVSRNGAQIFYCRAHKRFEPAIQLLVIGVKDLVNNQIYVSMGISFFA

Sequences:

>Translated_136_residues
MEKAVNEVILSMTGTRKDVAKRLVLGVVVGRNATEIAQEAEMDYETVLNNLDKAAQAKLIEVVKKLVGDHPVLLIIDDTH
DHKLYARAMPVSRNGAQIFYCRAHKRFEPAIQLLVIGVKDLVNNQIYVSMGISFFA
>Mature_136_residues
MEKAVNEVILSMTGTRKDVAKRLVLGVVVGRNATEIAQEAEMDYETVLNNLDKAAQAKLIEVVKKLVGDHPVLLIIDDTH
DHKLYARAMPVSRNGAQIFYCRAHKRFEPAIQLLVIGVKDLVNNQIYVSMGISFFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15163; Mature: 15163

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKAVNEVILSMTGTRKDVAKRLVLGVVVGRNATEIAQEAEMDYETVLNNLDKAAQAKLI
CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
EVVKKLVGDHPVLLIIDDTHDHKLYARAMPVSRNGAQIFYCRAHKRFEPAIQLLVIGVKD
HHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
LVNNQIYVSMGISFFA
HHCCEEEEEECCCCCC
>Mature Secondary Structure
MEKAVNEVILSMTGTRKDVAKRLVLGVVVGRNATEIAQEAEMDYETVLNNLDKAAQAKLI
CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
EVVKKLVGDHPVLLIIDDTHDHKLYARAMPVSRNGAQIFYCRAHKRFEPAIQLLVIGVKD
HHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
LVNNQIYVSMGISFFA
HHCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA