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The map label for this gene is crtI [H]

Identifier: 15899621

GI number: 15899621

Start: 2657556

End: 2658920

Strand: Direct

Name: crtI [H]

Synonym: SSO2907

Alternate gene names: 15899621

Gene position: 2657556-2658920 (Clockwise)

Preceding gene: 15899620

Following gene: 15899625

Centisome position: 88.81

GC content: 35.68

Gene sequence:

>1365_bases
GTGATGAAGGCAGTAGTAGTAGGTGCTGGGTTAGGAGGAATTTCAACAGCTATATTGCTAAAGAAGTTTTTTGATGAAGT
TGTAGTACTGGAAAAGAATACAACTCCAGGCGGGAGAGCTAGGTATTTTTCAGTAGGTGAATTTAGATTTGATATGGGTC
CTTCATGGTATTTAATGCCAGAAATTTTTGAGGAATTTTTCTCTGAGGCAGGAGAAAATCCTCATCCAATAATTAGAGTT
AACCCTCCAGTTAAGGTAATGGAAAGCAAGTTTCTCAAAAAAGAATATAGGGAATTCACTGGAGATAACGTAGATGATAG
GTACTTAAATAAGACAAGGTTATTTTATGATTTTTCTAAGAAGTTCATAAAAAAGGAGATGGTTTTCTCAGATTTTCTTG
ATAAGGAAGTATTAGTTAACATATCGGCATTATTTGACACTCTAGATAATTTCAATGCCAGATATTTTAGGGACAGTTTG
ATGAGAAAAGCTATGGGTTTTTCATCAGTATTTATAGGTGGTTCCCCATTCAGGGTACCAGCAGTTTATGCTATGATAAA
CTACGCTATTTACGGTCAAGGAGTTTTCTATCCTTATAAGGGTTTTGAAGGCTACGTAAAGAGATTATATGAAATAGCTA
GAAAAAAGGGAGTAGAATTCAAGTTCGATTTCCCAGTTAATAAGGTTAAAATAGATGAAGGTAAAGTGGTAGAAGTATCG
TCAAATATTAAGAGAGAGATGGGAGATGTATTCGTCTTCAACATGGATTACTTTTACGCCGATAGTTTACTACCAGAGGA
ATATAAGGTTATAAGTGGTAGGAGGTACAAGTTATCTCCATCAGCTATTTTAGCCTATATTGGATTAGAGGATACTCTGG
ATTTACCTCACCATACTGTAATAATTAATGGTGACTGGAGGGAGCACTTCACATCCATAGATAGGAATTCATTGCCTAGT
GTAGAAAATACTTCTTATTACGTGAGTTACAGAGGAGCGACCAATAAAGAGACAAGGGATCTAGTTATACTAATACCCGT
AGGTACAGGTACTGAAATTAGTAAAGAGCTTATAGACGGGGTAATTAGGGATTTAGAAGTTAAGATAGGATGTAAGATTA
AGGCTAGTTATATTAGAATTTATGGGCCTGATGATTTTAAAAGAGATTATAATGCATATGAGGGAACGGCATTTGGCTTA
GCTCATACTCTAGATCAGACTGGGCCCTTTAGGCTTCCAATGAAGAATACTAGATTAAAGAACCTATATTATGTTGGGCA
ATACACTCAGCCTGGAATAGGAGTACCAATGGTAACGCTTTCATCCATGATAGTCAGTAAGAAAATATCGAAGGAATTTT
TATGA

Upstream 100 bases:

>100_bases
TACTGGTTCACGACATTCATCACAAGGAAGGAAAGGGCAATTGGGGATTTTTGTTCGTTATAAAGGGTTTAGATAAGGTT
CCGATTTTGAAGGATGAATA

Downstream 100 bases:

>100_bases
TCCTACACTCTTCCCTAAATCATTTCCATATGTAAATCCTTCTACGGCTTTCGAATGACTTCCCTATGGGAAACATGTAT
ATAACGCCCAGCATTCTAGA

Product: phytoene dehydrogenase (desaturase) (crtI)

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MMKAVVVGAGLGGISTAILLKKFFDEVVVLEKNTTPGGRARYFSVGEFRFDMGPSWYLMPEIFEEFFSEAGENPHPIIRV
NPPVKVMESKFLKKEYREFTGDNVDDRYLNKTRLFYDFSKKFIKKEMVFSDFLDKEVLVNISALFDTLDNFNARYFRDSL
MRKAMGFSSVFIGGSPFRVPAVYAMINYAIYGQGVFYPYKGFEGYVKRLYEIARKKGVEFKFDFPVNKVKIDEGKVVEVS
SNIKREMGDVFVFNMDYFYADSLLPEEYKVISGRRYKLSPSAILAYIGLEDTLDLPHHTVIINGDWREHFTSIDRNSLPS
VENTSYYVSYRGATNKETRDLVILIPVGTGTEISKELIDGVIRDLEVKIGCKIKASYIRIYGPDDFKRDYNAYEGTAFGL
AHTLDQTGPFRLPMKNTRLKNLYYVGQYTQPGIGVPMVTLSSMIVSKKISKEFL

Sequences:

>Translated_454_residues
MMKAVVVGAGLGGISTAILLKKFFDEVVVLEKNTTPGGRARYFSVGEFRFDMGPSWYLMPEIFEEFFSEAGENPHPIIRV
NPPVKVMESKFLKKEYREFTGDNVDDRYLNKTRLFYDFSKKFIKKEMVFSDFLDKEVLVNISALFDTLDNFNARYFRDSL
MRKAMGFSSVFIGGSPFRVPAVYAMINYAIYGQGVFYPYKGFEGYVKRLYEIARKKGVEFKFDFPVNKVKIDEGKVVEVS
SNIKREMGDVFVFNMDYFYADSLLPEEYKVISGRRYKLSPSAILAYIGLEDTLDLPHHTVIINGDWREHFTSIDRNSLPS
VENTSYYVSYRGATNKETRDLVILIPVGTGTEISKELIDGVIRDLEVKIGCKIKASYIRIYGPDDFKRDYNAYEGTAFGL
AHTLDQTGPFRLPMKNTRLKNLYYVGQYTQPGIGVPMVTLSSMIVSKKISKEFL
>Mature_454_residues
MMKAVVVGAGLGGISTAILLKKFFDEVVVLEKNTTPGGRARYFSVGEFRFDMGPSWYLMPEIFEEFFSEAGENPHPIIRV
NPPVKVMESKFLKKEYREFTGDNVDDRYLNKTRLFYDFSKKFIKKEMVFSDFLDKEVLVNISALFDTLDNFNARYFRDSL
MRKAMGFSSVFIGGSPFRVPAVYAMINYAIYGQGVFYPYKGFEGYVKRLYEIARKKGVEFKFDFPVNKVKIDEGKVVEVS
SNIKREMGDVFVFNMDYFYADSLLPEEYKVISGRRYKLSPSAILAYIGLEDTLDLPHHTVIINGDWREHFTSIDRNSLPS
VENTSYYVSYRGATNKETRDLVILIPVGTGTEISKELIDGVIRDLEVKIGCKIKASYIRIYGPDDFKRDYNAYEGTAFGL
AHTLDQTGPFRLPMKNTRLKNLYYVGQYTQPGIGVPMVTLSSMIVSKKISKEFL

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 52012; Mature: 52012

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKAVVVGAGLGGISTAILLKKFFDEVVVLEKNTTPGGRARYFSVGEFRFDMGPSWYLMP
CCEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECEEEECCCCCEEECH
EIFEEFFSEAGENPHPIIRVNPPVKVMESKFLKKEYREFTGDNVDDRYLNKTRLFYDFSK
HHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KFIKKEMVFSDFLDKEVLVNISALFDTLDNFNARYFRDSLMRKAMGFSSVFIGGSPFRVP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCHHH
AVYAMINYAIYGQGVFYPYKGFEGYVKRLYEIARKKGVEFKFDFPVNKVKIDEGKVVEVS
HHHHHHHHHEEECCEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCEEEEC
SNIKREMGDVFVFNMDYFYADSLLPEEYKVISGRRYKLSPSAILAYIGLEDTLDLPHHTV
HHHHHHCCCEEEEECHHHHHCCCCCCHHHHHCCCEEEECHHHEEEEECCCCCCCCCCEEE
IINGDWREHFTSIDRNSLPSVENTSYYVSYRGATNKETRDLVILIPVGTGTEISKELIDG
EEECCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHH
VIRDLEVKIGCKIKASYIRIYGPDDFKRDYNAYEGTAFGLAHTLDQTGPFRLPMKNTRLK
HHHHCEEEEEEEEEEEEEEEECCCHHHHCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCC
NLYYVGQYTQPGIGVPMVTLSSMIVSKKISKEFL
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMKAVVVGAGLGGISTAILLKKFFDEVVVLEKNTTPGGRARYFSVGEFRFDMGPSWYLMP
CCEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECEEEECCCCCEEECH
EIFEEFFSEAGENPHPIIRVNPPVKVMESKFLKKEYREFTGDNVDDRYLNKTRLFYDFSK
HHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KFIKKEMVFSDFLDKEVLVNISALFDTLDNFNARYFRDSLMRKAMGFSSVFIGGSPFRVP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCHHH
AVYAMINYAIYGQGVFYPYKGFEGYVKRLYEIARKKGVEFKFDFPVNKVKIDEGKVVEVS
HHHHHHHHHEEECCEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCEEEEC
SNIKREMGDVFVFNMDYFYADSLLPEEYKVISGRRYKLSPSAILAYIGLEDTLDLPHHTV
HHHHHHCCCEEEEECHHHHHCCCCCCHHHHHCCCEEEECHHHEEEEECCCCCCCCCCEEE
IINGDWREHFTSIDRNSLPSVENTSYYVSYRGATNKETRDLVILIPVGTGTEISKELIDG
EEECCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHH
VIRDLEVKIGCKIKASYIRIYGPDDFKRDYNAYEGTAFGLAHTLDQTGPFRLPMKNTRLK
HHHHCEEEEEEEEEEEEEEEECCCHHHHCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCC
NLYYVGQYTQPGIGVPMVTLSSMIVSKKISKEFL
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7588751 [H]