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The map label for this gene is ytfH [C]

Identifier: 15899609

GI number: 15899609

Start: 2649268

End: 2649651

Strand: Direct

Name: ytfH [C]

Synonym: SSO2897

Alternate gene names: 15899609

Gene position: 2649268-2649651 (Clockwise)

Preceding gene: 15899604

Following gene: 15899610

Centisome position: 88.54

GC content: 33.07

Gene sequence:

>384_bases
ATGGTAAAGAGAAATAAAGTTATTAAACAGCAGAGTTGCCCATTAATAGATACTATAAACGTGATTTCTAGGAAATGGCT
ACTCCTTGTCCTAAATACTATAGGCAATGAAGGTAAATTAGGATTTAATTCTATTCTAAATAGTATCGACGATATTAGTC
CAAAGGCATTATCAGACGTATTAAAAACAATGGAAGAGATGGGCTTAGTCAAAAAAGTTATAGTAAAATCTTCACCTCCT
AGAGTAGAGTATTCACTTACTTATGAAGGAAAGAAGCTAAGAAAAGCGGTAATCCCTTTATTCAAATGGGCTGCAGAACA
TACTGGACACTATGAATGCCCAATACTACAATCCAATAAACTAAATAAAGAAGAGTATAGCTAG

Upstream 100 bases:

>100_bases
TACCACCTACGTAAAATTTAGTTATATTATTTTGTTCTTGTGACATCAAGTATTGAATAGTTACGTAAGTTTATAAACTA
TAAAGTTTATAGTAAGTAAT

Downstream 100 bases:

>100_bases
AGAATAAATATGTAAAATACCCATTTTAAAGATAGGAGGTGGCGAAGATAAGGAAATTAGAAGTTGAAGTAAGAAACATG
TGCTGCGGTCACTGTGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator HxlR Family; HxlR Family Transcriptional Regulator; MarR Family Transcriptional Regulator; HTH-Type Transcriptional Regulator; Transcription Regulator; Transcriptional Regulator MarR Family; Cinnamoyl Ester Hydrolase- A Transcriptional Regulator; Transcriptional Regulator Superfamily; Transcriptional Regulatory Protein; Transcriptional Regulator PadR Family; Regulatory Protein; Transcriptional Regulator Marr Family; HoxA-Like Transcriptional Regulator

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MVKRNKVIKQQSCPLIDTINVISRKWLLLVLNTIGNEGKLGFNSILNSIDDISPKALSDVLKTMEEMGLVKKVIVKSSPP
RVEYSLTYEGKKLRKAVIPLFKWAAEHTGHYECPILQSNKLNKEEYS

Sequences:

>Translated_127_residues
MVKRNKVIKQQSCPLIDTINVISRKWLLLVLNTIGNEGKLGFNSILNSIDDISPKALSDVLKTMEEMGLVKKVIVKSSPP
RVEYSLTYEGKKLRKAVIPLFKWAAEHTGHYECPILQSNKLNKEEYS
>Mature_127_residues
MVKRNKVIKQQSCPLIDTINVISRKWLLLVLNTIGNEGKLGFNSILNSIDDISPKALSDVLKTMEEMGLVKKVIVKSSPP
RVEYSLTYEGKKLRKAVIPLFKWAAEHTGHYECPILQSNKLNKEEYS

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14413; Mature: 14413

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRNKVIKQQSCPLIDTINVISRKWLLLVLNTIGNEGKLGFNSILNSIDDISPKALSDV
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHH
LKTMEEMGLVKKVIVKSSPPRVEYSLTYEGKKLRKAVIPLFKWAAEHTGHYECPILQSNK
HHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LNKEEYS
CCCCCCC
>Mature Secondary Structure
MVKRNKVIKQQSCPLIDTINVISRKWLLLVLNTIGNEGKLGFNSILNSIDDISPKALSDV
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHH
LKTMEEMGLVKKVIVKSSPPRVEYSLTYEGKKLRKAVIPLFKWAAEHTGHYECPILQSNK
HHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LNKEEYS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA