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The map label for this gene is 15899573

Identifier: 15899573

GI number: 15899573

Start: 2616522

End: 2617922

Strand: Reverse

Name: 15899573

Synonym: SSO2860

Alternate gene names: NA

Gene position: 2617922-2616522 (Counterclockwise)

Preceding gene: 15899574

Following gene: 15899572

Centisome position: 87.49

GC content: 40.47

Gene sequence:

>1401_bases
ATGGAATTACCGTCAGTTTTTGCTCCCTTTAAGAGAGATCCAACGTTTTATCCATCTCCAAAGATGGCCATGAAATCACC
TCCAGAGGACTTAGCTTATGTTGCTTGCTTATACACTGGAACTGGAATAAATAGGCCAGATTTCATAGCAGTAGTTGATG
TAAAGCCTGAATCGGAAACTTATTCTAAGGTAATCCATAAGGTTGAATTATCATATGTCAATGATGAGCTGCACCATTTT
GGTTGGAATGCTTGTAGTTCCGCCTTATGCCCTAATGGAAGACCAAATTTTGAGAGAAGATTCTTAGTTGTACCCGGTTT
ACGTTCCTCAAGGATTTATATAGTAGATACAAAATTAAACCCTAGACAGCCTAATATAGTTAAAACTATAGAACCAGAGG
AGGTTAAGAAAGTAACGGGCTACAGTAGGCTACATACAGTACATTGTGGGCCAGATGGTATCTACATAAGTGCTTTTGGC
AATGAAAACGGTGAGGGTCCAGGAGGAATTTTAATGTTAGACCATTACAGTTTTGAACCTTTAGGCAAGTGGGAGATAGA
TAGGAGTGACCAATATTTGGCTTACGATTTCTGGTGGAATTTACCAAATGAAGTAATGGTAACTAGTGAGTGGGCAGTGC
CAAACACTATTGAGAACGGGCTTCGATTGGAACATCTTAAAGATAGATATGGAAATAGGATACACTTCTGGGACTTGAGG
AGAAGAAAGAAGGTATCAAGCGTAACCCTTGGTGAAGAGAATAGGATGGCGTTAGAGCTTAGACCCCTACATGACCCAAC
TAAACTCATGGGATTCATAAATATGGTAGTAAGCCTAAAGGATCTGAGCAGTTCAATCTGGTTATGGTACTACGAAGATG
GTAAATGGAATGGGGAAAAGGTTATTGAAATCCCTGCGGAACCTACTGAGGGAGGACTGCCTGAGATATTGAAACCATTT
AAGGCTGTACCACCATTAGTTACTGATATAGACTTAAGCCTTGATGATAAGTTCCTTTACGTTAGCTTATGGGGTATAGG
AGAGATTAGGCAGTACGACGTGAGTAATCCATTTAAACCAGTACTTACTGGAAAGGTAAAATTGGGAGGTATATTTCATA
GGGCTGACCATCCCTCAGATCATAAACTTACTGGAGCTCCTCAGATGATTGAAATCAGTAGGGACGGAAAAAGAGTTTAC
GTTACCAATTCCCTATATAGTACTTGGGATAATCAATTCTATCCAGAGGGCTTAAAGGGATGGATGGTTAAACTAAATGC
TAATCCAGATGGAGGTCTAGATGTGGATAAGGAGTTCTTCGTGGATTTTGGAGAGGCTAGGTCGCATCAAGTTAGGTTAA
GGGGAGGAGATGCTTCCTCTGACTCTTATTGCTATCCTTAG

Upstream 100 bases:

>100_bases
TGGTACATAATAAGGGATAAGAAAATTAACATGAATGTTCAACCTCAATAATTTGCACAAATAATAAAACTTTATAAGGT
TTAGATACAAAATAACTTTA

Downstream 100 bases:

>100_bases
CCTAGGGATAGTAGAGGGGCTAGATCCCTATAAGGGATTACTTTTTTCTTATTATTTTTACTCATTTAGAAAGGTGAAGG
AATCATACGTAGTCCCTATC

Product: selenium-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MELPSVFAPFKRDPTFYPSPKMAMKSPPEDLAYVACLYTGTGINRPDFIAVVDVKPESETYSKVIHKVELSYVNDELHHF
GWNACSSALCPNGRPNFERRFLVVPGLRSSRIYIVDTKLNPRQPNIVKTIEPEEVKKVTGYSRLHTVHCGPDGIYISAFG
NENGEGPGGILMLDHYSFEPLGKWEIDRSDQYLAYDFWWNLPNEVMVTSEWAVPNTIENGLRLEHLKDRYGNRIHFWDLR
RRKKVSSVTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWYYEDGKWNGEKVIEIPAEPTEGGLPEILKPF
KAVPPLVTDIDLSLDDKFLYVSLWGIGEIRQYDVSNPFKPVLTGKVKLGGIFHRADHPSDHKLTGAPQMIEISRDGKRVY
VTNSLYSTWDNQFYPEGLKGWMVKLNANPDGGLDVDKEFFVDFGEARSHQVRLRGGDASSDSYCYP

Sequences:

>Translated_466_residues
MELPSVFAPFKRDPTFYPSPKMAMKSPPEDLAYVACLYTGTGINRPDFIAVVDVKPESETYSKVIHKVELSYVNDELHHF
GWNACSSALCPNGRPNFERRFLVVPGLRSSRIYIVDTKLNPRQPNIVKTIEPEEVKKVTGYSRLHTVHCGPDGIYISAFG
NENGEGPGGILMLDHYSFEPLGKWEIDRSDQYLAYDFWWNLPNEVMVTSEWAVPNTIENGLRLEHLKDRYGNRIHFWDLR
RRKKVSSVTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWYYEDGKWNGEKVIEIPAEPTEGGLPEILKPF
KAVPPLVTDIDLSLDDKFLYVSLWGIGEIRQYDVSNPFKPVLTGKVKLGGIFHRADHPSDHKLTGAPQMIEISRDGKRVY
VTNSLYSTWDNQFYPEGLKGWMVKLNANPDGGLDVDKEFFVDFGEARSHQVRLRGGDASSDSYCYP
>Mature_466_residues
MELPSVFAPFKRDPTFYPSPKMAMKSPPEDLAYVACLYTGTGINRPDFIAVVDVKPESETYSKVIHKVELSYVNDELHHF
GWNACSSALCPNGRPNFERRFLVVPGLRSSRIYIVDTKLNPRQPNIVKTIEPEEVKKVTGYSRLHTVHCGPDGIYISAFG
NENGEGPGGILMLDHYSFEPLGKWEIDRSDQYLAYDFWWNLPNEVMVTSEWAVPNTIENGLRLEHLKDRYGNRIHFWDLR
RRKKVSSVTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWYYEDGKWNGEKVIEIPAEPTEGGLPEILKPF
KAVPPLVTDIDLSLDDKFLYVSLWGIGEIRQYDVSNPFKPVLTGKVKLGGIFHRADHPSDHKLTGAPQMIEISRDGKRVY
VTNSLYSTWDNQFYPEGLKGWMVKLNANPDGGLDVDKEFFVDFGEARSHQVRLRGGDASSDSYCYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI16306550, Length=474, Percent_Identity=40.5063291139241, Blast_Score=335, Evalue=7e-92,
Organism=Caenorhabditis elegans, GI17543050, Length=474, Percent_Identity=37.7637130801688, Blast_Score=295, Evalue=3e-80,
Organism=Caenorhabditis elegans, GI17563122, Length=455, Percent_Identity=26.3736263736264, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17540410, Length=113, Percent_Identity=45.1327433628319, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24646469, Length=479, Percent_Identity=35.0730688935282, Blast_Score=265, Evalue=5e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53111; Mature: 53111

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELPSVFAPFKRDPTFYPSPKMAMKSPPEDLAYVACLYTGTGINRPDFIAVVDVKPESET
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEECCCCCCCCEEEEEEECCCHHH
YSKVIHKVELSYVNDELHHFGWNACSSALCPNGRPNFERRFLVVPGLRSSRIYIVDTKLN
HHHHHHHHEEEHCCHHHHHCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCC
PRQPNIVKTIEPEEVKKVTGYSRLHTVHCGPDGIYISAFGNENGEGPGGILMLDHYSFEP
CCCCCEEECCCHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCC
LGKWEIDRSDQYLAYDFWWNLPNEVMVTSEWAVPNTIENGLRLEHLKDRYGNRIHFWDLR
CCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCCHHHCCEEHHHHHHHHCCEEEEEECH
RRKKVSSVTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWYYEDGKWNGEK
HHHCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCE
VIEIPAEPTEGGLPEILKPFKAVPPLVTDIDLSLDDKFLYVSLWGIGEIRQYDVSNPFKP
EEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCEEEECCCCCCCC
VLTGKVKLGGIFHRADHPSDHKLTGAPQMIEISRDGKRVYVTNSLYSTWDNQFYPEGLKG
EEECEEEECEEEECCCCCCCCEECCCCCEEEEECCCCEEEEECCHHHCCCCCCCCCCCCE
WMVKLNANPDGGLDVDKEFFVDFGEARSHQVRLRGGDASSDSYCYP
EEEEEECCCCCCCCCCHHHHEECCCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MELPSVFAPFKRDPTFYPSPKMAMKSPPEDLAYVACLYTGTGINRPDFIAVVDVKPESET
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEECCCCCCCCEEEEEEECCCHHH
YSKVIHKVELSYVNDELHHFGWNACSSALCPNGRPNFERRFLVVPGLRSSRIYIVDTKLN
HHHHHHHHEEEHCCHHHHHCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCC
PRQPNIVKTIEPEEVKKVTGYSRLHTVHCGPDGIYISAFGNENGEGPGGILMLDHYSFEP
CCCCCEEECCCHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCC
LGKWEIDRSDQYLAYDFWWNLPNEVMVTSEWAVPNTIENGLRLEHLKDRYGNRIHFWDLR
CCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCCHHHCCEEHHHHHHHHCCEEEEEECH
RRKKVSSVTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWYYEDGKWNGEK
HHHCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCE
VIEIPAEPTEGGLPEILKPFKAVPPLVTDIDLSLDDKFLYVSLWGIGEIRQYDVSNPFKP
EEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCEEEECCCCCCCC
VLTGKVKLGGIFHRADHPSDHKLTGAPQMIEISRDGKRVYVTNSLYSTWDNQFYPEGLKG
EEECEEEECEEEECCCCCCCCEECCCCCEEEEECCCCEEEEECCHHHCCCCCCCCCCCCE
WMVKLNANPDGGLDVDKEFFVDFGEARSHQVRLRGGDASSDSYCYP
EEEEEECCCCCCCCCCHHHHEECCCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA