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The map label for this gene is 15899562

Identifier: 15899562

GI number: 15899562

Start: 2606453

End: 2608117

Strand: Reverse

Name: 15899562

Synonym: SSO2847

Alternate gene names: NA

Gene position: 2608117-2606453 (Counterclockwise)

Preceding gene: 15899566

Following gene: 15899561

Centisome position: 87.16

GC content: 39.46

Gene sequence:

>1665_bases
ATGAAAAGGAAGTACCCGTATAGTCTAGCTAAGGGATTAACATCTACCCAAATAGCAGTAATAGTAGCAGTAATCGTAAT
AGTGATAATAATAGGAGTAGTAGCAGGTTTCGTTTTAACCAAGGGGCCCTCTACAACTGCTGTAACTACTACAGTAACAA
GCACGTTTACTACAACTACTACAATACCCAGCACAACCACGTCAACCCCTAGCAATACAGTAGTCTTCTATACATGGTGG
GGTGGAGGTGATGGAGGGGAAGCACTAAGCCAGATAATCCCTGCAGTTAAGCAATATGCGGGCTTACAAATGCAAACATA
TTCTATTCCAGGAGCTGGAGGTACAAATGCAAAATATGCTATTTTAGCGCTTATACAAGCTGGTAAACCTCCAGCTGCAT
TTCAGGTACACTATGGACCAGAAATGATAAGTTATGTTGAGGCTGCGCCCAATGGTATACATACTTTTGTCAATATGACT
CCTTATTTAATCCAATGGGGACTACTTAATAACGCGGTTTATGCAGTATTACAAGCTGGAGCTTATAATGGTACATTATT
ATCAGTACCAATTAACGTACATAGGGGAGCAGTTCTTTATGTCAACACTCAATTGTTAAGGGAATATAATTTACCATTCC
CCTACAACTTTAGTACTCTCGTTTATGATACTGTACAACTAGCTAATCACGGTGTGAGTCCATGGATTATACCTGGTGGA
GACGGTGGATGGGATCAATTTAACGTATGGGAGGATATATTCTTATATTTAGCTGGGCCACAACTCTACAATGAACTAAT
ATATGGTACACTGAACTTCAGCAATCCAACGGTTCAGAAACTAATAAATGAAACCAACTATTGGTTCTTGAACTTCACAA
GCTATAACTACCCTGGTTGGCAATCTATGTCATGGGAACAAGCATTTGCACTAATAGCTCAAGGTAAAGTCGCATTTCAA
GCCAATGGGAACTGGGTAACTAATTACGCAAGTTATATAAACGTTACAGTTTATCCTCCGTTACCTCAATACATAAGCAA
CTCAAGTGTTTCTGTAGTGGAAACTCCATTCCCAGGCACACAGCACTACTATGCTTTAGTGATAGATACAATTGGTATAC
CAGTAGGTCCTCAAGAACAACAAGCTTTACAACTAGCCCATTTCTGGTCTTCATACCAAGGGCAGGAAGTCTGGACAAAA
TACAAGGCAGTAACCTATTATAAAAATGGTACGGATTGGTATGCTCAACCAGCACAATGGTATGATTATCAGCAATTAAT
AAATACGTCAGAGCAAAACTTCGTTTATCAACTATCAGATGGTGGAGTGTTTGATGACGTTTTCGCTCAAATAGATTCAG
GATTACTAACTTTACAGCAAGTTGGCAAGGTTGGATTATCTGCTTGGAACTCTACGTTAGTATCTTCAATGCAACAAGAA
CAAAATGAATGGTTAGCCGCAGCTAAATTAGGATTAGGATACTTAGGATTCCCCGGCCATCCTTTTGCTGGATACTACCC
ACCATGGGTTACAAATCCATCAGCATATGGACTAACCAATAATACACAAAAGACAAGTAATAGCGTAATGCTCTTCTTAC
TCCCATTCTTAGCGTTACCCCTTGCAATAGCCAGCATAGACAATAAATACTATCTCTTGAAGTAA

Upstream 100 bases:

>100_bases
ACTTTATAAATAGGGGTAACTATATATAATAATATATATAAGTTTAATAGTAAGTACAATAAAAAACTTTATAAACCATC
AGTGGTTACCATAAATTGTC

Downstream 100 bases:

>100_bases
TATAATTCCTTTTCTCTTTTTTTATTATTTAAGTTAGCATATCTAATTCAAATTTGTTTAATACAATTGTTCTCTGATAT
AAACTTTTGAGTTTAAGTTT

Product: sugar-binding periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MKRKYPYSLAKGLTSTQIAVIVAVIVIVIIIGVVAGFVLTKGPSTTAVTTTVTSTFTTTTTIPSTTTSTPSNTVVFYTWW
GGGDGGEALSQIIPAVKQYAGLQMQTYSIPGAGGTNAKYAILALIQAGKPPAAFQVHYGPEMISYVEAAPNGIHTFVNMT
PYLIQWGLLNNAVYAVLQAGAYNGTLLSVPINVHRGAVLYVNTQLLREYNLPFPYNFSTLVYDTVQLANHGVSPWIIPGG
DGGWDQFNVWEDIFLYLAGPQLYNELIYGTLNFSNPTVQKLINETNYWFLNFTSYNYPGWQSMSWEQAFALIAQGKVAFQ
ANGNWVTNYASYINVTVYPPLPQYISNSSVSVVETPFPGTQHYYALVIDTIGIPVGPQEQQALQLAHFWSSYQGQEVWTK
YKAVTYYKNGTDWYAQPAQWYDYQQLINTSEQNFVYQLSDGGVFDDVFAQIDSGLLTLQQVGKVGLSAWNSTLVSSMQQE
QNEWLAAAKLGLGYLGFPGHPFAGYYPPWVTNPSAYGLTNNTQKTSNSVMLFLLPFLALPLAIASIDNKYYLLK

Sequences:

>Translated_554_residues
MKRKYPYSLAKGLTSTQIAVIVAVIVIVIIIGVVAGFVLTKGPSTTAVTTTVTSTFTTTTTIPSTTTSTPSNTVVFYTWW
GGGDGGEALSQIIPAVKQYAGLQMQTYSIPGAGGTNAKYAILALIQAGKPPAAFQVHYGPEMISYVEAAPNGIHTFVNMT
PYLIQWGLLNNAVYAVLQAGAYNGTLLSVPINVHRGAVLYVNTQLLREYNLPFPYNFSTLVYDTVQLANHGVSPWIIPGG
DGGWDQFNVWEDIFLYLAGPQLYNELIYGTLNFSNPTVQKLINETNYWFLNFTSYNYPGWQSMSWEQAFALIAQGKVAFQ
ANGNWVTNYASYINVTVYPPLPQYISNSSVSVVETPFPGTQHYYALVIDTIGIPVGPQEQQALQLAHFWSSYQGQEVWTK
YKAVTYYKNGTDWYAQPAQWYDYQQLINTSEQNFVYQLSDGGVFDDVFAQIDSGLLTLQQVGKVGLSAWNSTLVSSMQQE
QNEWLAAAKLGLGYLGFPGHPFAGYYPPWVTNPSAYGLTNNTQKTSNSVMLFLLPFLALPLAIASIDNKYYLLK
>Mature_554_residues
MKRKYPYSLAKGLTSTQIAVIVAVIVIVIIIGVVAGFVLTKGPSTTAVTTTVTSTFTTTTTIPSTTTSTPSNTVVFYTWW
GGGDGGEALSQIIPAVKQYAGLQMQTYSIPGAGGTNAKYAILALIQAGKPPAAFQVHYGPEMISYVEAAPNGIHTFVNMT
PYLIQWGLLNNAVYAVLQAGAYNGTLLSVPINVHRGAVLYVNTQLLREYNLPFPYNFSTLVYDTVQLANHGVSPWIIPGG
DGGWDQFNVWEDIFLYLAGPQLYNELIYGTLNFSNPTVQKLINETNYWFLNFTSYNYPGWQSMSWEQAFALIAQGKVAFQ
ANGNWVTNYASYINVTVYPPLPQYISNSSVSVVETPFPGTQHYYALVIDTIGIPVGPQEQQALQLAHFWSSYQGQEVWTK
YKAVTYYKNGTDWYAQPAQWYDYQQLINTSEQNFVYQLSDGGVFDDVFAQIDSGLLTLQQVGKVGLSAWNSTLVSSMQQE
QNEWLAAAKLGLGYLGFPGHPFAGYYPPWVTNPSAYGLTNNTQKTSNSVMLFLLPFLALPLAIASIDNKYYLLK

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16 [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 61129; Mature: 61129

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKYPYSLAKGLTSTQIAVIVAVIVIVIIIGVVAGFVLTKGPSTTAVTTTVTSTFTTTT
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEEEEEEE
TIPSTTTSTPSNTVVFYTWWGGGDGGEALSQIIPAVKQYAGLQMQTYSIPGAGGTNAKYA
ECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEE
ILALIQAGKPPAAFQVHYGPEMISYVEAAPNGIHTFVNMTPYLIQWGLLNNAVYAVLQAG
EEEEECCCCCCCEEEEECCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCC
AYNGTLLSVPINVHRGAVLYVNTQLLREYNLPFPYNFSTLVYDTVQLANHGVSPWIIPGG
CCCCEEEEEEEEECCCEEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECC
DGGWDQFNVWEDIFLYLAGPQLYNELIYGTLNFSNPTVQKLINETNYWFLNFTSYNYPGW
CCCCCCCHHHHHHHHHCCCHHHHHHHEEEEEECCCHHHHHHHCCCCEEEEEEECCCCCCC
QSMSWEQAFALIAQGKVAFQANGNWVTNYASYINVTVYPPLPQYISNSSVSVVETPFPGT
CCCCHHHHHHHHHCCEEEEEECCCEEEEEEEEEEEEEECCCHHHHCCCCCEEEECCCCCC
QHYYALVIDTIGIPVGPQEQQALQLAHFWSSYQGQEVWTKYKAVTYYKNGTDWYAQPAQW
CCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHEEEEEEEEECCCCCCCCCCHH
YDYQQLINTSEQNFVYQLSDGGVFDDVFAQIDSGLLTLQQVGKVGLSAWNSTLVSSMQQE
HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QNEWLAAAKLGLGYLGFPGHPFAGYYPPWVTNPSAYGLTNNTQKTSNSVMLFLLPFLALP
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LAIASIDNKYYLLK
HHHHCCCCEEEEEC
>Mature Secondary Structure
MKRKYPYSLAKGLTSTQIAVIVAVIVIVIIIGVVAGFVLTKGPSTTAVTTTVTSTFTTTT
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEEEEEEE
TIPSTTTSTPSNTVVFYTWWGGGDGGEALSQIIPAVKQYAGLQMQTYSIPGAGGTNAKYA
ECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEE
ILALIQAGKPPAAFQVHYGPEMISYVEAAPNGIHTFVNMTPYLIQWGLLNNAVYAVLQAG
EEEEECCCCCCCEEEEECCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCC
AYNGTLLSVPINVHRGAVLYVNTQLLREYNLPFPYNFSTLVYDTVQLANHGVSPWIIPGG
CCCCEEEEEEEEECCCEEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECC
DGGWDQFNVWEDIFLYLAGPQLYNELIYGTLNFSNPTVQKLINETNYWFLNFTSYNYPGW
CCCCCCCHHHHHHHHHCCCHHHHHHHEEEEEECCCHHHHHHHCCCCEEEEEEECCCCCCC
QSMSWEQAFALIAQGKVAFQANGNWVTNYASYINVTVYPPLPQYISNSSVSVVETPFPGT
CCCCHHHHHHHHHCCEEEEEECCCEEEEEEEEEEEEEECCCHHHHCCCCCEEEECCCCCC
QHYYALVIDTIGIPVGPQEQQALQLAHFWSSYQGQEVWTKYKAVTYYKNGTDWYAQPAQW
CCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHEEEEEEEEECCCCCCCCCCHH
YDYQQLINTSEQNFVYQLSDGGVFDDVFAQIDSGLLTLQQVGKVGLSAWNSTLVSSMQQE
HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QNEWLAAAKLGLGYLGFPGHPFAGYYPPWVTNPSAYGLTNNTQKTSNSVMLFLLPFLALP
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LAIASIDNKYYLLK
HHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]