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The map label for this gene is hypE [C]

Identifier: 15899425

GI number: 15899425

Start: 2460870

End: 2461895

Strand: Direct

Name: hypE [C]

Synonym: SSO2708

Alternate gene names: 15899425

Gene position: 2460870-2461895 (Clockwise)

Preceding gene: 15899423

Following gene: 15899427

Centisome position: 82.24

GC content: 40.35

Gene sequence:

>1026_bases
ATGCATTTAGGAAAGATAAATGAGGATGTATTTAACAAGGTAATCTATCCTCACCTTGGAGAGAGACGAAAGGAAGTAGT
TGTCGGTCCTCAGCATGGAGTTGATACTGGAGCAATAGATCTTCAAGATGGTAGAGTCTTGGTAGTAAAGACTGATCCAG
TATTCATCGTTCCTCAATTTGGGTTTAAAAAAGCTGCGTGGTTCGCAGTTCACATTTTAGCTAGCGATGTTATGACCTCT
GGAATTCCACCCGAGTATGCTGTAATAGATCTAAATTTACCGCCCAGAATCAAAGATGAGGAATTTGAAGAGATGTGGAT
TGGGATTCACGAGGCGTTAAAGGAGATTGGAGTAATGGTAGTTGGAGGTCATACAGGTGTCTATGAGGGTACTGACTATC
CAATGGTAGGAGGATTCACGATGTTCGGTATAGGAGAGAAGGAAAGGTTAGGAATGCCATCTAAGGTTAAGGTTGGAGAT
AGTGTGATAATGACTAAGGGTCCAGCGATAGAAGCTACCGGCCTTTTAACTAACCTTTACCCTGAGTATTTTAAGCAAAG
ATTGAGTAATGAGATTTTTAACGAAGCCTATAACATGTATTGGAAAATGAGTTGTTGGAAAGATGGTTTAATAGCGTCCA
GAATTGGCATTCACATGATGCATGATGCTACTGAAGGTGGGGTATTTGGAGCATTAACAGAGGTAGCGAGAGCGAGTAGT
AAAGGAATGCGGATATATGAGGAAAGGTTTTTCATCAATAGGGCTGTTAGGGAGGTGACTAAGTTAGTTAATATAGATCC
ATGGATATCCATAAGTGAAGGTACTATGATCATAGTTACTGATAAGGGAGAAGAAGTGAGGAACACGTTGATAAGGGAAG
GAATTGAAGCTGAAATAATTGGGGAAATAGTAGACCAAAGCGGAGAGGTAACTATGGTAAAGAAAGACGGAAGTAGAGTT
AAGATTGAACATCCTTTAGAGGATCCTTTCTGGAGAGCGTTTTTCGATTTAGCTAGCAAAACTTAG

Upstream 100 bases:

>100_bases
TTAAATATATTTTTATTTTTATTACCTTTTATCCAGCAACTACTTATGGAAAGCATTTGGTTACTTAACCTTTTAAATTT
CCCAAGTATTTTATCACTTA

Downstream 100 bases:

>100_bases
TAATTACTTTCTCGATAACTTCTTTAGTTTTTTCCTTAAATTTTCCCTCTCTGATCTCTTCGCAAACAATTTCTCTGAAT
TCCTCCATCTCTTCTAAATA

Product: hydrogenase expression/formation factor related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MHLGKINEDVFNKVIYPHLGERRKEVVVGPQHGVDTGAIDLQDGRVLVVKTDPVFIVPQFGFKKAAWFAVHILASDVMTS
GIPPEYAVIDLNLPPRIKDEEFEEMWIGIHEALKEIGVMVVGGHTGVYEGTDYPMVGGFTMFGIGEKERLGMPSKVKVGD
SVIMTKGPAIEATGLLTNLYPEYFKQRLSNEIFNEAYNMYWKMSCWKDGLIASRIGIHMMHDATEGGVFGALTEVARASS
KGMRIYEERFFINRAVREVTKLVNIDPWISISEGTMIIVTDKGEEVRNTLIREGIEAEIIGEIVDQSGEVTMVKKDGSRV
KIEHPLEDPFWRAFFDLASKT

Sequences:

>Translated_341_residues
MHLGKINEDVFNKVIYPHLGERRKEVVVGPQHGVDTGAIDLQDGRVLVVKTDPVFIVPQFGFKKAAWFAVHILASDVMTS
GIPPEYAVIDLNLPPRIKDEEFEEMWIGIHEALKEIGVMVVGGHTGVYEGTDYPMVGGFTMFGIGEKERLGMPSKVKVGD
SVIMTKGPAIEATGLLTNLYPEYFKQRLSNEIFNEAYNMYWKMSCWKDGLIASRIGIHMMHDATEGGVFGALTEVARASS
KGMRIYEERFFINRAVREVTKLVNIDPWISISEGTMIIVTDKGEEVRNTLIREGIEAEIIGEIVDQSGEVTMVKKDGSRV
KIEHPLEDPFWRAFFDLASKT
>Mature_341_residues
MHLGKINEDVFNKVIYPHLGERRKEVVVGPQHGVDTGAIDLQDGRVLVVKTDPVFIVPQFGFKKAAWFAVHILASDVMTS
GIPPEYAVIDLNLPPRIKDEEFEEMWIGIHEALKEIGVMVVGGHTGVYEGTDYPMVGGFTMFGIGEKERLGMPSKVKVGD
SVIMTKGPAIEATGLLTNLYPEYFKQRLSNEIFNEAYNMYWKMSCWKDGLIASRIGIHMMHDATEGGVFGALTEVARASS
KGMRIYEERFFINRAVREVTKLVNIDPWISISEGTMIIVTDKGEEVRNTLIREGIEAEIIGEIVDQSGEVTMVKKDGSRV
KIEHPLEDPFWRAFFDLASKT

Specific function: Unknown

COG id: COG0309

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR011854
- InterPro:   IPR016188 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: NA

Molecular weight: Translated: 38183; Mature: 38183

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLGKINEDVFNKVIYPHLGERRKEVVVGPQHGVDTGAIDLQDGRVLVVKTDPVFIVPQF
CCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEECCCEEEEEECCCEEEEECC
GFKKAAWFAVHILASDVMTSGIPPEYAVIDLNLPPRIKDEEFEEMWIGIHEALKEIGVMV
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEE
VGGHTGVYEGTDYPMVGGFTMFGIGEKERLGMPSKVKVGDSVIMTKGPAIEATGLLTNLY
ECCCCCCCCCCCCCEECCEEEEECCCHHHCCCCCEEECCCEEEEECCCCEEHHHHHHHHH
PEYFKQRLSNEIFNEAYNMYWKMSCWKDGLIASRIGIHMMHDATEGGVFGALTEVARASS
HHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHCEEEEECCCCCCHHHHHHHHHHHCC
KGMRIYEERFFINRAVREVTKLVNIDPWISISEGTMIIVTDKGEEVRNTLIREGIEAEII
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCHHHHHHHHHCCCCHHHH
GEIVDQSGEVTMVKKDGSRVKIEHPLEDPFWRAFFDLASKT
HHHHCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MHLGKINEDVFNKVIYPHLGERRKEVVVGPQHGVDTGAIDLQDGRVLVVKTDPVFIVPQF
CCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEECCCEEEEEECCCEEEEECC
GFKKAAWFAVHILASDVMTSGIPPEYAVIDLNLPPRIKDEEFEEMWIGIHEALKEIGVMV
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEE
VGGHTGVYEGTDYPMVGGFTMFGIGEKERLGMPSKVKVGDSVIMTKGPAIEATGLLTNLY
ECCCCCCCCCCCCCEECCEEEEECCCHHHCCCCCEEECCCEEEEECCCCEEHHHHHHHHH
PEYFKQRLSNEIFNEAYNMYWKMSCWKDGLIASRIGIHMMHDATEGGVFGALTEVARASS
HHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHCEEEEECCCCCCHHHHHHHHHHHCC
KGMRIYEERFFINRAVREVTKLVNIDPWISISEGTMIIVTDKGEEVRNTLIREGIEAEII
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCHHHHHHHHHCCCCHHHH
GEIVDQSGEVTMVKKDGSRVKIEHPLEDPFWRAFFDLASKT
HHHHCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]