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The map label for this gene is 15899422

Identifier: 15899422

GI number: 15899422

Start: 2458404

End: 2459261

Strand: Direct

Name: 15899422

Synonym: SSO2705

Alternate gene names: NA

Gene position: 2458404-2459261 (Clockwise)

Preceding gene: 15899421

Following gene: 15899423

Centisome position: 82.16

GC content: 37.06

Gene sequence:

>858_bases
ATGGAGCCGAATTTAATTACCTTAAGTAATTACAAGGCGACTTTAGGAGAGGGCCCCGTTTACGATAAGGAGTTGAATAA
ACTTTTTTGGGTTGATATTGAGGGAAAGAGGATAATAGTTAACGATCTGAATACTGGTACTGAAGTATTCTATGAGATGC
CTGATCTCATATCATCCTTATGTGTTATTGATGATAAGAGAGTGATTGCTACCATTAGACATGGATTTTATATAGTAAAT
TTAGACAGAGGAGAAATTCAGAAGATTGCTGAAGTGGAAACTGATATGGAATCTAATAGATTTAACGATGGGAAGTGTGA
TAAACTTGGGCGATATTGGGCGGGAACTATGAATATGAATGAAAGAAAACCAACTGGAAGTTTCTATAAACTTGATACTG
GTAAGATAACTAAGATTTTAGAAGGTCTCACAGTATCAAATGGCTTAGGTTGGGATCCAGATAATACTCAAATGTTCCTC
ATTGATAGTCCAGTTAGAAAGGTCTTCGTATTTGATTTCGATCTGAATAAAGGGGAGATCTATAATAGAAGAGTTGCAGT
AGATTTCGGAAATGAGCCGGGAAATCCTGACGGGATGGCAGTTGATGAGGAAGGATATATTTGGGTAGCTCATTGGGGTG
GAGGAAAGGTTAGTAGATGGAATCCTAAAACCGGGAAGAAATTGTTTGAAATAAAAGTGCCCGCAACCTATGTAACCTCA
GTAACTTTCGGTACTCAAGAACTAGACCAATTATTCATTACCACTGCTGGAAAAAGCCAAGACCCATTAGCTGGAAAAAC
GTTTACAACTAAAGCTAATGTAAGAGGATTGCAAAATTTTAGGTTTAAAATCTCGTAA

Upstream 100 bases:

>100_bases
AAAAACGGTGATTTATGAAAGAGATTTAATGAGACCTATGGCTGTAAACTCCTCAGATGATAAAAAGGATTAAAAGCTAA
TTATACTAAAATACTAAGGC

Downstream 100 bases:

>100_bases
GTTTTATATCCTTAAACGTTATTTTTCATTATGAATCCAGTTCACATTTTGGCTAAAAAGGGGGAAGTTGCAGAAAGAGT
TCTAGTAGTCGGAGACCCAG

Product: regucalcin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MEPNLITLSNYKATLGEGPVYDKELNKLFWVDIEGKRIIVNDLNTGTEVFYEMPDLISSLCVIDDKRVIATIRHGFYIVN
LDRGEIQKIAEVETDMESNRFNDGKCDKLGRYWAGTMNMNERKPTGSFYKLDTGKITKILEGLTVSNGLGWDPDNTQMFL
IDSPVRKVFVFDFDLNKGEIYNRRVAVDFGNEPGNPDGMAVDEEGYIWVAHWGGGKVSRWNPKTGKKLFEIKVPATYVTS
VTFGTQELDQLFITTAGKSQDPLAGKTFTTKANVRGLQNFRFKIS

Sequences:

>Translated_285_residues
MEPNLITLSNYKATLGEGPVYDKELNKLFWVDIEGKRIIVNDLNTGTEVFYEMPDLISSLCVIDDKRVIATIRHGFYIVN
LDRGEIQKIAEVETDMESNRFNDGKCDKLGRYWAGTMNMNERKPTGSFYKLDTGKITKILEGLTVSNGLGWDPDNTQMFL
IDSPVRKVFVFDFDLNKGEIYNRRVAVDFGNEPGNPDGMAVDEEGYIWVAHWGGGKVSRWNPKTGKKLFEIKVPATYVTS
VTFGTQELDQLFITTAGKSQDPLAGKTFTTKANVRGLQNFRFKIS
>Mature_285_residues
MEPNLITLSNYKATLGEGPVYDKELNKLFWVDIEGKRIIVNDLNTGTEVFYEMPDLISSLCVIDDKRVIATIRHGFYIVN
LDRGEIQKIAEVETDMESNRFNDGKCDKLGRYWAGTMNMNERKPTGSFYKLDTGKITKILEGLTVSNGLGWDPDNTQMFL
IDSPVRKVFVFDFDLNKGEIYNRRVAVDFGNEPGNPDGMAVDEEGYIWVAHWGGGKVSRWNPKTGKKLFEIKVPATYVTS
VTFGTQELDQLFITTAGKSQDPLAGKTFTTKANVRGLQNFRFKIS

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=255, Percent_Identity=36.4705882352941, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI4759036, Length=255, Percent_Identity=36.4705882352941, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24646912, Length=291, Percent_Identity=34.3642611683849, Blast_Score=138, Evalue=4e-33,
Organism=Drosophila melanogaster, GI24646910, Length=291, Percent_Identity=34.3642611683849, Blast_Score=138, Evalue=4e-33,
Organism=Drosophila melanogaster, GI45551448, Length=296, Percent_Identity=31.7567567567568, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24641471, Length=296, Percent_Identity=31.7567567567568, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI18860103, Length=296, Percent_Identity=31.7567567567568, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24641469, Length=296, Percent_Identity=31.7567567567568, Blast_Score=126, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 32195; Mature: 32195

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPNLITLSNYKATLGEGPVYDKELNKLFWVDIEGKRIIVNDLNTGTEVFYEMPDLISSL
CCCCEEEEECCEEECCCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHH
CVIDDKRVIATIRHGFYIVNLDRGEIQKIAEVETDMESNRFNDGKCDKLGRYWAGTMNMN
HEECCCCEEEEEECCEEEEEECHHHHHHHHHHHCCHHCCCCCCCCHHHCCCEEEECCCCC
ERKPTGSFYKLDTGKITKILEGLTVSNGLGWDPDNTQMFLIDSPVRKVFVFDFDLNKGEI
CCCCCCCEEEECCCHHHHHHCCCEECCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCE
YNRRVAVDFGNEPGNPDGMAVDEEGYIWVAHWGGGKVSRWNPKTGKKLFEIKVPATYVTS
EEEEEEEEECCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEE
VTFGTQELDQLFITTAGKSQDPLAGKTFTTKANVRGLQNFRFKIS
EECCHHHHCEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEC
>Mature Secondary Structure
MEPNLITLSNYKATLGEGPVYDKELNKLFWVDIEGKRIIVNDLNTGTEVFYEMPDLISSL
CCCCEEEEECCEEECCCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHH
CVIDDKRVIATIRHGFYIVNLDRGEIQKIAEVETDMESNRFNDGKCDKLGRYWAGTMNMN
HEECCCCEEEEEECCEEEEEECHHHHHHHHHHHCCHHCCCCCCCCHHHCCCEEEECCCCC
ERKPTGSFYKLDTGKITKILEGLTVSNGLGWDPDNTQMFLIDSPVRKVFVFDFDLNKGEI
CCCCCCCEEEECCCHHHHHHCCCEECCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCE
YNRRVAVDFGNEPGNPDGMAVDEEGYIWVAHWGGGKVSRWNPKTGKKLFEIKVPATYVTS
EEEEEEEEECCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEE
VTFGTQELDQLFITTAGKSQDPLAGKTFTTKANVRGLQNFRFKIS
EECCHHHHCEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA