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The map label for this gene is ygiS [C]

Identifier: 15899392

GI number: 15899392

Start: 2425098

End: 2427179

Strand: Direct

Name: ygiS [C]

Synonym: SSO2669

Alternate gene names: 15899392

Gene position: 2425098-2427179 (Clockwise)

Preceding gene: 15899390

Following gene: 15899394

Centisome position: 81.05

GC content: 37.85

Gene sequence:

>2082_bases
ATGAGGAAGGAATTAGTATTAGAAGTAGGTGTAATATTCTCGATATCTGTAATGCTCTTTTCAATCAGTGGTATAATGAT
AGCCAACTCAGCATCTTCACCATTTCCGTCAACCCTTTACTTAGGATGGTATAATTCTAACGTCGAAGCTTATTCTTCAT
TTGCTACTTATAATCCCAATATATTTGCAGGAGGTTTAGGTGGATCTTTTTACGGATTGCTCTATGCATACTCTGCAATA
ATTAATGTTAGTAATTCTCAAGCGATTCCCGTGATAATAACTTCATGGAACTTCTCTCCAGCAAACTGGCAGCAGATTTG
GCAGACAAAACCGGTTAATGTGACGCTGATTATACGCAATGATTCTGGTTGGAGTAATGGGCAACCTCTCACTGCTTACG
ATCTTATGGCCACATGCCTAATTTTAGATATGTTTGGTGCTCCGCCATTTCCTAATTATACTGTTATTAATAATTACACG
CTAGTTGAGACTTGGCCTCCAGATACGTTATCACCGATATTGTTTACAGACACGCTAATTAATACGGTAGGCTTAGGGGA
AGTTGCAATTATAATACCATACCAAGTTTGGAAGCCTATAATTAGTCAGATAATGGGCAATTGGACAACAATACAAAATA
CAAGCAATATGAAACTTGCGCAGCAGATTATTAAGAATATTAGGTCAGAAATCCTTCACTTTAGACCAAACCCTGCCACA
TATCCTTATAGTGGTCCGTTCTACCTATCACAGTTATCATCGAATGAAATAGTACTAAATAAGAATCCATATTATTATGA
CGCTAAATATATACCATTCAATCAAGTAATAATATATCAATACGGTCAGGCTGACTTAGCAGCAGCTGCAATAACGGGTG
GTCAAGTTTCTATGGACTGGTCCGGTTTGACAGGATTATCACCAACGCAGCTAGAAAGTTTGCCGACCACACTTGAGGTA
ATTAATATACCTCAACCATTTGGCTGGGGTATAGCATTCAATCTGAAGAATCCATGGTTAAGAGAGTATCAAGTAAGGGC
GGCAATTGCATATATTCTAAATAGGACTGCCATAGCTTCAGTGGGAGGTCCTTTAACAGCACCGGTTACTATTCCTAATG
CAATACCCAATTTATCGTACTATTCATTCATGACATCTTCGCAATACTACTCATCTTTAAATCCGTATAATGTTAATTTA
ACAAAGGCAGCACAGCTGCTTAAGAGTGTAGGGTTTTACCAGAAGTCTGGAGTTTGGTATACTCCAAATGGTACACCGTT
TACTTTAACAATAGGTGCTGGAAGTCCACCAACGCAAGCACTAGCAATGATGGAAGAAGTACAAAAAGAATTACAGCAAT
TTGGAATTAACGTACAATTACACATATATACTGTAGTTAGTCAGTGGCATCAAGCATGGCAAAATGGTACCGGCTATGAT
TTATGGTTTGAGAATTGGGGTAGTTCATACTCGCCGGGGACTGCACCATGGAGTTTGGTACTTTCTTATTTTGGAGGATA
TCCATGGAATGTTACACAGTGGAATGAGAATCTTACTTTACCTAATGGTACTATAATTGACTTCCATAAATTACTTGAGG
AAACCGAGTCTCCTAATACCACACAACAGTTAATACAAGCTAATCAAGAGTTATCATATTATATGAACCAATACTTACTT
CCAATCTTACCTCTAGTTGAGATCGAGAATTACGTCATTGTAAATCCCTCGCTACTTATTGCAGCTCCACCTGCTAATTC
GTGGATATGGGAAGAGGCACAATACGGTATAGGTGGTACTGCTATGGTACAAGCTCTAATAGATTATTGGTACGCCCCAT
TATATGAGAGCACTATAATTACTACAACTACGACTTCTATTTCTACTACTATAACTACAACAACCACTTCCGCAACAACA
GCTACCACGTCTGTAACTACGACTACGTCTGTAACTACGACTTCTATTTCTACTACTACAGTTACTGTGACTTCTACTTC
AACTATTCCAATTATAATAGCAATAGTTATAGTTATTATTGTTATAATTGCTGCTGTGGCAATATTAATGAGAAGGAGAT
AA

Upstream 100 bases:

>100_bases
CATGCATTACTATTACTTTTTAATAAGATATAAGTGTTTCTGAGCTGTATCATTAGAGTTTTAACAAAGTTTATAAGCTA
GACAATACAAAATAATATTT

Downstream 100 bases:

>100_bases
AAGGGTGTAAGTATTTTTAATGGGAAAAGGTAGTATAGTCTTTTTTAAAAATTTTTCTTCTTTTTTCCCTTTAATATCTT
CTTATTCTTGGATTACTTAT

Product: ABC transporter, periplasmic component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 693; Mature: 693

Protein sequence:

>693_residues
MRKELVLEVGVIFSISVMLFSISGIMIANSASSPFPSTLYLGWYNSNVEAYSSFATYNPNIFAGGLGGSFYGLLYAYSAI
INVSNSQAIPVIITSWNFSPANWQQIWQTKPVNVTLIIRNDSGWSNGQPLTAYDLMATCLILDMFGAPPFPNYTVINNYT
LVETWPPDTLSPILFTDTLINTVGLGEVAIIIPYQVWKPIISQIMGNWTTIQNTSNMKLAQQIIKNIRSEILHFRPNPAT
YPYSGPFYLSQLSSNEIVLNKNPYYYDAKYIPFNQVIIYQYGQADLAAAAITGGQVSMDWSGLTGLSPTQLESLPTTLEV
INIPQPFGWGIAFNLKNPWLREYQVRAAIAYILNRTAIASVGGPLTAPVTIPNAIPNLSYYSFMTSSQYYSSLNPYNVNL
TKAAQLLKSVGFYQKSGVWYTPNGTPFTLTIGAGSPPTQALAMMEEVQKELQQFGINVQLHIYTVVSQWHQAWQNGTGYD
LWFENWGSSYSPGTAPWSLVLSYFGGYPWNVTQWNENLTLPNGTIIDFHKLLEETESPNTTQQLIQANQELSYYMNQYLL
PILPLVEIENYVIVNPSLLIAAPPANSWIWEEAQYGIGGTAMVQALIDYWYAPLYESTIITTTTTSISTTITTTTTSATT
ATTSVTTTTSVTTTSISTTTVTVTSTSTIPIIIAIVIVIIVIIAAVAILMRRR

Sequences:

>Translated_693_residues
MRKELVLEVGVIFSISVMLFSISGIMIANSASSPFPSTLYLGWYNSNVEAYSSFATYNPNIFAGGLGGSFYGLLYAYSAI
INVSNSQAIPVIITSWNFSPANWQQIWQTKPVNVTLIIRNDSGWSNGQPLTAYDLMATCLILDMFGAPPFPNYTVINNYT
LVETWPPDTLSPILFTDTLINTVGLGEVAIIIPYQVWKPIISQIMGNWTTIQNTSNMKLAQQIIKNIRSEILHFRPNPAT
YPYSGPFYLSQLSSNEIVLNKNPYYYDAKYIPFNQVIIYQYGQADLAAAAITGGQVSMDWSGLTGLSPTQLESLPTTLEV
INIPQPFGWGIAFNLKNPWLREYQVRAAIAYILNRTAIASVGGPLTAPVTIPNAIPNLSYYSFMTSSQYYSSLNPYNVNL
TKAAQLLKSVGFYQKSGVWYTPNGTPFTLTIGAGSPPTQALAMMEEVQKELQQFGINVQLHIYTVVSQWHQAWQNGTGYD
LWFENWGSSYSPGTAPWSLVLSYFGGYPWNVTQWNENLTLPNGTIIDFHKLLEETESPNTTQQLIQANQELSYYMNQYLL
PILPLVEIENYVIVNPSLLIAAPPANSWIWEEAQYGIGGTAMVQALIDYWYAPLYESTIITTTTTSISTTITTTTTSATT
ATTSVTTTTSVTTTSISTTTVTVTSTSTIPIIIAIVIVIIVIIAAVAILMRRR
>Mature_693_residues
MRKELVLEVGVIFSISVMLFSISGIMIANSASSPFPSTLYLGWYNSNVEAYSSFATYNPNIFAGGLGGSFYGLLYAYSAI
INVSNSQAIPVIITSWNFSPANWQQIWQTKPVNVTLIIRNDSGWSNGQPLTAYDLMATCLILDMFGAPPFPNYTVINNYT
LVETWPPDTLSPILFTDTLINTVGLGEVAIIIPYQVWKPIISQIMGNWTTIQNTSNMKLAQQIIKNIRSEILHFRPNPAT
YPYSGPFYLSQLSSNEIVLNKNPYYYDAKYIPFNQVIIYQYGQADLAAAAITGGQVSMDWSGLTGLSPTQLESLPTTLEV
INIPQPFGWGIAFNLKNPWLREYQVRAAIAYILNRTAIASVGGPLTAPVTIPNAIPNLSYYSFMTSSQYYSSLNPYNVNL
TKAAQLLKSVGFYQKSGVWYTPNGTPFTLTIGAGSPPTQALAMMEEVQKELQQFGINVQLHIYTVVSQWHQAWQNGTGYD
LWFENWGSSYSPGTAPWSLVLSYFGGYPWNVTQWNENLTLPNGTIIDFHKLLEETESPNTTQQLIQANQELSYYMNQYLL
PILPLVEIENYVIVNPSLLIAAPPANSWIWEEAQYGIGGTAMVQALIDYWYAPLYESTIITTTTTSISTTITTTTTSATT
ATTSVTTTTSVTTTSISTTTVTVTSTSTIPIIIAIVIVIIVIIAAVAILMRRR

Specific function: Probably Part Of A Binding-Protein-Dependent Transport System. [C]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76687; Mature: 76687

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKELVLEVGVIFSISVMLFSISGIMIANSASSPFPSTLYLGWYNSNVEAYSSFATYNPN
CCCCEEEEHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCCHHHHHHEEECCCC
IFAGGLGGSFYGLLYAYSAIINVSNSQAIPVIITSWNFSPANWQQIWQTKPVNVTLIIRN
EEECCCCHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCCCHHHHHCCCCCEEEEEEEC
DSGWSNGQPLTAYDLMATCLILDMFGAPPFPNYTVINNYTLVETWPPDTLSPILFTDTLI
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECEEEEEECCCCCCCCHHHHHHHH
NTVGLGEVAIIIPYQVWKPIISQIMGNWTTIQNTSNMKLAQQIIKNIRSEILHFRPNPAT
HHCCCCCEEEEECHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHEEECCCCCC
YPYSGPFYLSQLSSNEIVLNKNPYYYDAKYIPFNQVIIYQYGQADLAAAAITGGQVSMDW
CCCCCCHHEEECCCCCEEECCCCEEEEEEECCCCEEEEEEECCCCEEEEEECCCEEEECC
SGLTGLSPTQLESLPTTLEVINIPQPFGWGIAFNLKNPWLREYQVRAAIAYILNRTAIAS
CCCCCCCHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
VGGPLTAPVTIPNAIPNLSYYSFMTSSQYYSSLNPYNVNLTKAAQLLKSVGFYQKSGVWY
CCCCEECCEECCCCCCCCCHHHEECCHHHHHCCCCCEEEHHHHHHHHHHCCCEECCCEEE
TPNGTPFTLTIGAGSPPTQALAMMEEVQKELQQFGINVQLHIYTVVSQWHQAWQNGTGYD
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCEE
LWFENWGSSYSPGTAPWSLVLSYFGGYPWNVTQWNENLTLPNGTIIDFHKLLEETESPNT
EEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCEEECCCCCCHHHHHHHHHCCCCCH
TQQLIQANQELSYYMNQYLLPILPLVEIENYVIVNPSLLIAAPPANSWIWEEAQYGIGGT
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCEEEEECCCCCCCCCCCCCCCCCHH
AMVQALIDYWYAPLYESTIITTTTTSISTTITTTTTSATTATTSVTTTTSVTTTSISTTT
HHHHHHHHHHHHHHHCCEEEEEEECEEEEEEEEEECCCCEEEEEEEEEEEEEEEEEEEEE
VTVTSTSTIPIIIAIVIVIIVIIAAVAILMRRR
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKELVLEVGVIFSISVMLFSISGIMIANSASSPFPSTLYLGWYNSNVEAYSSFATYNPN
CCCCEEEEHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCCHHHHHHEEECCCC
IFAGGLGGSFYGLLYAYSAIINVSNSQAIPVIITSWNFSPANWQQIWQTKPVNVTLIIRN
EEECCCCHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCCCHHHHHCCCCCEEEEEEEC
DSGWSNGQPLTAYDLMATCLILDMFGAPPFPNYTVINNYTLVETWPPDTLSPILFTDTLI
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECEEEEEECCCCCCCCHHHHHHHH
NTVGLGEVAIIIPYQVWKPIISQIMGNWTTIQNTSNMKLAQQIIKNIRSEILHFRPNPAT
HHCCCCCEEEEECHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHEEECCCCCC
YPYSGPFYLSQLSSNEIVLNKNPYYYDAKYIPFNQVIIYQYGQADLAAAAITGGQVSMDW
CCCCCCHHEEECCCCCEEECCCCEEEEEEECCCCEEEEEEECCCCEEEEEECCCEEEECC
SGLTGLSPTQLESLPTTLEVINIPQPFGWGIAFNLKNPWLREYQVRAAIAYILNRTAIAS
CCCCCCCHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
VGGPLTAPVTIPNAIPNLSYYSFMTSSQYYSSLNPYNVNLTKAAQLLKSVGFYQKSGVWY
CCCCEECCEECCCCCCCCCHHHEECCHHHHHCCCCCEEEHHHHHHHHHHCCCEECCCEEE
TPNGTPFTLTIGAGSPPTQALAMMEEVQKELQQFGINVQLHIYTVVSQWHQAWQNGTGYD
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCEE
LWFENWGSSYSPGTAPWSLVLSYFGGYPWNVTQWNENLTLPNGTIIDFHKLLEETESPNT
EEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCEEECCCCCCHHHHHHHHHCCCCCH
TQQLIQANQELSYYMNQYLLPILPLVEIENYVIVNPSLLIAAPPANSWIWEEAQYGIGGT
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCEEEEECCCCCCCCCCCCCCCCCHH
AMVQALIDYWYAPLYESTIITTTTTSISTTITTTTTSATTATTSVTTTTSVTTTSISTTT
HHHHHHHHHHHHHHHCCEEEEEEECEEEEEEEEEECCCCEEEEEEEEEEEEEEEEEEEEE
VTVTSTSTIPIIIAIVIVIIVIIAAVAILMRRR
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA