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The map label for this gene is soxL-1

Identifier: 15899383

GI number: 15899383

Start: 2418081

End: 2419055

Strand: Direct

Name: soxL-1

Synonym: SSO2660

Alternate gene names: NA

Gene position: 2418081-2419055 (Clockwise)

Preceding gene: 15899374

Following gene: 15899384

Centisome position: 80.81

GC content: 39.28

Gene sequence:

>975_bases
ATGGCTAGGGGAATACCAATTATCAAGCGTGATGACCTTATATTTGCTATTAAACTCTTAAGAAGGATGAGAGATCCAAA
AACTAGGTTTGATGAGAAAGAATTTATGAAAAGTGGAAGAGATTATTTGTACAACTACGCTGAGAAAAATGTAGGTCCCC
TTGATCCTAGCAGAAGAGCTTTCCTAAAAGGTATACTCATAGGTATAGGAGCCGCAGCAGTATTAAGTGCAATTCCAGTC
ATTTCATATCTCAATCAACCAGAAATAAGTTTGAAACAATTTCCTTGGGTAATTATAGTCGACTCCAGTGGCAATCCAAT
TAAAGCTTCACAAATTCCCGTGAATGACCCAGAGATATTATTGTTCGAATATCCAATGCAAGGCGATATAACCTTCATCT
TAAACTTAGGTGATGAGAACGATAATCCTATAAAAGTTCCTCCGACTACTGTTGTTATTCCGGAAAATGGTAAGACTTAT
ACTTTTCCTGGTGGGGTTGGACCCAATAACTCAATAGTAGCTTTTTCAGCAATTTGCCAACATTTAGGTTGTACTCCACC
TGAAATACACTTCTATCCTCCTAAGTATATGAAAGTTGGTTTGCCTACTCCCAATTTTTTACCACAAGTTGCACTTCAAG
CAGCCCAACAAGCCAATGCCCCTGGAGTTATACACTGTGACTGTCACGGATCTACTTATGATCCTTATCATGGTGCCTCA
GTCCTTACTGGACCCACAGTTAGACCGTTACCGTACGTACAGTTGTATTGGGATTCTAATACTGATTACTTGTACGCAAT
AGGTATGAACTTAAATGCTCCCACGATATTAGGACGTACTAACGATCTTTCAGGGTATGCGTATCTATCTTCATATGATG
AATCAACTGGCTGTCCAAAAATGCTATTACAATCTGGTCAAACACCTAGTAATTGCTACACTGAGCTTGAGAGCGCTGGA
AACACCTACCAATGA

Upstream 100 bases:

>100_bases
ATTTGTAAATATTCAATATGCTAACAAAGCAGTTTGCAATGTAAAATTTTAATATAAAAATTTTTAAGGTATAGCTCACA
TTCTAAACTAGGTAATTAGT

Downstream 100 bases:

>100_bases
GGTGACAAGTTTGGGAGCTATAGAAATGATGTATGAGAAATATATCCAGATGAGCAAGATGATGTCTAGAATGAACTATA
TGCCGGCTATCGCTGCTGGT

Product: Rieske iron-sulfur protein-1 (soxL-1)

Products: NA

Alternate protein names: Rieske Domain-Containing Protein; Rieske Fe-S Protein; Rieske Domain Protein; Rieske-I Iron Sulfur Protein; Rieske Iron-Sulfur Protein SoxF Related Protein; Rieske Iron-Sulfur Domain-Containing Protein; Sulfur Oxidation Protein Rieske-I Iron Sulfur Protein SoxL; Rieske Iron-Sulfur

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MARGIPIIKRDDLIFAIKLLRRMRDPKTRFDEKEFMKSGRDYLYNYAEKNVGPLDPSRRAFLKGILIGIGAAAVLSAIPV
ISYLNQPEISLKQFPWVIIVDSSGNPIKASQIPVNDPEILLFEYPMQGDITFILNLGDENDNPIKVPPTTVVIPENGKTY
TFPGGVGPNNSIVAFSAICQHLGCTPPEIHFYPPKYMKVGLPTPNFLPQVALQAAQQANAPGVIHCDCHGSTYDPYHGAS
VLTGPTVRPLPYVQLYWDSNTDYLYAIGMNLNAPTILGRTNDLSGYAYLSSYDESTGCPKMLLQSGQTPSNCYTELESAG
NTYQ

Sequences:

>Translated_324_residues
MARGIPIIKRDDLIFAIKLLRRMRDPKTRFDEKEFMKSGRDYLYNYAEKNVGPLDPSRRAFLKGILIGIGAAAVLSAIPV
ISYLNQPEISLKQFPWVIIVDSSGNPIKASQIPVNDPEILLFEYPMQGDITFILNLGDENDNPIKVPPTTVVIPENGKTY
TFPGGVGPNNSIVAFSAICQHLGCTPPEIHFYPPKYMKVGLPTPNFLPQVALQAAQQANAPGVIHCDCHGSTYDPYHGAS
VLTGPTVRPLPYVQLYWDSNTDYLYAIGMNLNAPTILGRTNDLSGYAYLSSYDESTGCPKMLLQSGQTPSNCYTELESAG
NTYQ
>Mature_323_residues
ARGIPIIKRDDLIFAIKLLRRMRDPKTRFDEKEFMKSGRDYLYNYAEKNVGPLDPSRRAFLKGILIGIGAAAVLSAIPVI
SYLNQPEISLKQFPWVIIVDSSGNPIKASQIPVNDPEILLFEYPMQGDITFILNLGDENDNPIKVPPTTVVIPENGKTYT
FPGGVGPNNSIVAFSAICQHLGCTPPEIHFYPPKYMKVGLPTPNFLPQVALQAAQQANAPGVIHCDCHGSTYDPYHGASV
LTGPTVRPLPYVQLYWDSNTDYLYAIGMNLNAPTILGRTNDLSGYAYLSSYDESTGCPKMLLQSGQTPSNCYTELESAGN
TYQ

Specific function: Unknown

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35682; Mature: 35551

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGIPIIKRDDLIFAIKLLRRMRDPKTRFDEKEFMKSGRDYLYNYAEKNVGPLDPSRRA
CCCCCCEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHH
FLKGILIGIGAAAVLSAIPVISYLNQPEISLKQFPWVIIVDSSGNPIKASQIPVNDPEIL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEECCCCCCEEECCCCCCCCCEE
LFEYPMQGDITFILNLGDENDNPIKVPPTTVVIPENGKTYTFPGGVGPNNSIVAFSAICQ
EEECCCCCCEEEEEEECCCCCCCEECCCEEEEECCCCCEEEECCCCCCCCCEEEHHHHHH
HLGCTPPEIHFYPPKYMKVGLPTPNFLPQVALQAAQQANAPGVIHCDCHGSTYDPYHGAS
HHCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCE
VLTGPTVRPLPYVQLYWDSNTDYLYAIGMNLNAPTILGRTNDLSGYAYLSSYDESTGCPK
EECCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCCEEEEECCCCCCCCHH
MLLQSGQTPSNCYTELESAGNTYQ
HHHHCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ARGIPIIKRDDLIFAIKLLRRMRDPKTRFDEKEFMKSGRDYLYNYAEKNVGPLDPSRRA
CCCCCEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHH
FLKGILIGIGAAAVLSAIPVISYLNQPEISLKQFPWVIIVDSSGNPIKASQIPVNDPEIL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEECCCCCCEEECCCCCCCCCEE
LFEYPMQGDITFILNLGDENDNPIKVPPTTVVIPENGKTYTFPGGVGPNNSIVAFSAICQ
EEECCCCCCEEEEEEECCCCCCCEECCCEEEEECCCCCEEEECCCCCCCCCEEEHHHHHH
HLGCTPPEIHFYPPKYMKVGLPTPNFLPQVALQAAQQANAPGVIHCDCHGSTYDPYHGAS
HHCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCE
VLTGPTVRPLPYVQLYWDSNTDYLYAIGMNLNAPTILGRTNDLSGYAYLSSYDESTGCPK
EECCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCCEEEEECCCCCCCCHH
MLLQSGQTPSNCYTELESAGNTYQ
HHHHCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA