Click here to switch to the map view.

The map label for this gene is glpC [H]

Identifier: 15899369

GI number: 15899369

Start: 2404567

End: 2405754

Strand: Direct

Name: glpC [H]

Synonym: SSO2643

Alternate gene names: 15899369

Gene position: 2404567-2405754 (Clockwise)

Preceding gene: 15899368

Following gene: 15899370

Centisome position: 80.36

GC content: 36.53

Gene sequence:

>1188_bases
ATGTATTCTTTAAATCCAAGTAATTCTACTTTTTTTGACTCTAATAAATTATTATCAGAATTTATAAGGCAAGCGAGCGT
TTGTCACGGTTGCAGATTATGTTTCAACTATTGCGATTCTTTTCCCCTTATGTTTACTTATACTGATAAGAAAGGCCCCA
AAAACTTAACCTTAGATGACTTGTTTAATGTAGCCTCTAAGTGCTTTCACTGTAAGATGTGCTACGTCAATTGTCCCTAT
GTTCCTCCTCACGAATTTAACATGGACTTTCCAAGCCTAATGGAATGGGCGTGGCTATACTATAAGAAAAATCGAGGATT
AACTGTAAGGGATTTTATCTTTGAAATGCTAGATGGTGTGAAGTTTGCAAGGCCCTTAGCTAAAGTAATTATGGAAAAGA
ACAAGGAGTTATTAGGTATTCACAAAGAAGCCCCCACGTTACCAGTAGCGGAGAAAGGTTTAAGGGAAAGAGTTAAGCCC
AAACGTATCGATAGTCCCAAAGCAAGGGTTGCACTATTTCCCACTTGTTTAATTGAGAATTTCTTCCCAGAAATTGGCGA
GGATTTAGTAGAAATATACAACGAATTAGGGATAGAAGTAATTATTCCTAATTTCGTTTGTTGTGGAGCTCCAATGTTGG
ATTCTGGTGACGTTGATAGGCTTAAGAAGAATGCTGAGTATAATATCAAAATAATTGAGGATTTAATAAAGGAAGGTTAT
GATGTAGTTTCGCCTATACCTACTTGTACGTTAATGATTAAGGAGTACAAGAAGGTTCTTGATAGAGAAGTACCTAAGGT
TTATGATGCAATGGAGTATCTTTTAAAATTAAAGAATGAGGGCAAGATAGAGCTAAAGGGTAAGATTGAGAAGAGTGTGT
ATTATCATCCTCCATGCCACCTTAAGTTCTTACAATTAGGATTACCTGGGGTTAGATTATTAAGGTCAATGGGAGCGAAA
GTCGATATTTCCAATAATGGTTGTTCCGGTATAGATGGGGGTTGGGGATTAAGAAATTATGACACTGCTAAAAGAGTAGG
AAGTAAAATGATGGAAGCTTTTAAACAGAGTAAAGCTGATCTTTTTTCAACTGAATGCCCTCTGGCTGGGCTTCAGATAG
AAAAATCTTCTGGTAGAAGGCCATTACATCCAATTCAATTGTTAAAGGAGGCGATGAAAAATGGTTAA

Upstream 100 bases:

>100_bases
TTAATGAAATTGCAGAATGGTTTGAAACCTTGGCAAGAGCTGAGAAAAGCCATGCTGAGAAATTCACTGGAGTGCTTAAC
CAACTAAAGGGAGGCAAGTA

Downstream 100 bases:

>100_bases
AATAACCCTACAAGATATCTTACCTTGGAGAACATATGAAAAAGTTCGAATGGATAGAATAAGGAGGATTATTGAGGTAA
AGAATAAGAGAAGAATAGAG

Product: glycerol-3-phosphate dehydrogenase chain C (anaerobic) (glpC)

Products: glycerone phosphate; reduced acceptor

Alternate protein names: G-3-P dehydrogenase [H]

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MYSLNPSNSTFFDSNKLLSEFIRQASVCHGCRLCFNYCDSFPLMFTYTDKKGPKNLTLDDLFNVASKCFHCKMCYVNCPY
VPPHEFNMDFPSLMEWAWLYYKKNRGLTVRDFIFEMLDGVKFARPLAKVIMEKNKELLGIHKEAPTLPVAEKGLRERVKP
KRIDSPKARVALFPTCLIENFFPEIGEDLVEIYNELGIEVIIPNFVCCGAPMLDSGDVDRLKKNAEYNIKIIEDLIKEGY
DVVSPIPTCTLMIKEYKKVLDREVPKVYDAMEYLLKLKNEGKIELKGKIEKSVYYHPPCHLKFLQLGLPGVRLLRSMGAK
VDISNNGCSGIDGGWGLRNYDTAKRVGSKMMEAFKQSKADLFSTECPLAGLQIEKSSGRRPLHPIQLLKEAMKNG

Sequences:

>Translated_395_residues
MYSLNPSNSTFFDSNKLLSEFIRQASVCHGCRLCFNYCDSFPLMFTYTDKKGPKNLTLDDLFNVASKCFHCKMCYVNCPY
VPPHEFNMDFPSLMEWAWLYYKKNRGLTVRDFIFEMLDGVKFARPLAKVIMEKNKELLGIHKEAPTLPVAEKGLRERVKP
KRIDSPKARVALFPTCLIENFFPEIGEDLVEIYNELGIEVIIPNFVCCGAPMLDSGDVDRLKKNAEYNIKIIEDLIKEGY
DVVSPIPTCTLMIKEYKKVLDREVPKVYDAMEYLLKLKNEGKIELKGKIEKSVYYHPPCHLKFLQLGLPGVRLLRSMGAK
VDISNNGCSGIDGGWGLRNYDTAKRVGSKMMEAFKQSKADLFSTECPLAGLQIEKSSGRRPLHPIQLLKEAMKNG
>Mature_395_residues
MYSLNPSNSTFFDSNKLLSEFIRQASVCHGCRLCFNYCDSFPLMFTYTDKKGPKNLTLDDLFNVASKCFHCKMCYVNCPY
VPPHEFNMDFPSLMEWAWLYYKKNRGLTVRDFIFEMLDGVKFARPLAKVIMEKNKELLGIHKEAPTLPVAEKGLRERVKP
KRIDSPKARVALFPTCLIENFFPEIGEDLVEIYNELGIEVIIPNFVCCGAPMLDSGDVDRLKKNAEYNIKIIEDLIKEGY
DVVSPIPTCTLMIKEYKKVLDREVPKVYDAMEYLLKLKNEGKIELKGKIEKSVYYHPPCHLKFLQLGLPGVRLLRSMGAK
VDISNNGCSGIDGGWGLRNYDTAKRVGSKMMEAFKQSKADLFSTECPLAGLQIEKSSGRRPLHPIQLLKEAMKNG

Specific function: Electron transfer protein; may also function as the membrane anchor for the glpAB dimer [H]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Note=Loosely bound to the cytoplasmic membrane often occurring in vesicles associated with fumarate reductase [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788576, Length=400, Percent_Identity=28, Blast_Score=132, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR017753
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: 1.1.99.5

Molecular weight: Translated: 45035; Mature: 45035

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSLNPSNSTFFDSNKLLSEFIRQASVCHGCRLCFNYCDSFPLMFTYTDKKGPKNLTLDD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHH
LFNVASKCFHCKMCYVNCPYVPPHEFNMDFPSLMEWAWLYYKKNRGLTVRDFIFEMLDGV
HHHHHHHHHEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH
KFARPLAKVIMEKNKELLGIHKEAPTLPVAEKGLRERVKPKRIDSPKARVALFPTCLIEN
HHHHHHHHHHHHCCCHHEEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHEEHHHHHHHHH
FFPEIGEDLVEIYNELGIEVIIPNFVCCGAPMLDSGDVDRLKKNAEYNIKIIEDLIKEGY
HHHHHHHHHHHHHHHCCCEEEECCHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCC
DVVSPIPTCTLMIKEYKKVLDREVPKVYDAMEYLLKLKNEGKIELKGKIEKSVYYHPPCH
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECCCCC
LKFLQLGLPGVRLLRSMGAKVDISNNGCSGIDGGWGLRNYDTAKRVGSKMMEAFKQSKAD
HHHHHHCCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LFSTECPLAGLQIEKSSGRRPLHPIQLLKEAMKNG
HHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MYSLNPSNSTFFDSNKLLSEFIRQASVCHGCRLCFNYCDSFPLMFTYTDKKGPKNLTLDD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHH
LFNVASKCFHCKMCYVNCPYVPPHEFNMDFPSLMEWAWLYYKKNRGLTVRDFIFEMLDGV
HHHHHHHHHEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH
KFARPLAKVIMEKNKELLGIHKEAPTLPVAEKGLRERVKPKRIDSPKARVALFPTCLIEN
HHHHHHHHHHHHCCCHHEEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHEEHHHHHHHHH
FFPEIGEDLVEIYNELGIEVIIPNFVCCGAPMLDSGDVDRLKKNAEYNIKIIEDLIKEGY
HHHHHHHHHHHHHHHCCCEEEECCHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCC
DVVSPIPTCTLMIKEYKKVLDREVPKVYDAMEYLLKLKNEGKIELKGKIEKSVYYHPPCH
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECCCCC
LKFLQLGLPGVRLLRSMGAKVDISNNGCSGIDGGWGLRNYDTAKRVGSKMMEAFKQSKAD
HHHHHHCCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LFSTECPLAGLQIEKSSGRRPLHPIQLLKEAMKNG
HHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: sn-glycerol 3-phosphate; acceptor

Specific reaction: sn-glycerol 3-phosphate + acceptor = glycerone phosphate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]