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The map label for this gene is gspE-3

Identifier: 15899140

GI number: 15899140

Start: 2174074

End: 2174925

Strand: Direct

Name: gspE-3

Synonym: SSO2387

Alternate gene names: NA

Gene position: 2174074-2174925 (Clockwise)

Preceding gene: 15899139

Following gene: 15899147

Centisome position: 72.66

GC content: 34.15

Gene sequence:

>852_bases
ATGGGGGAGTGGTATATAATGAGTAAAATTTTCAAGTTCCCCTTACAGATCGGTAGAGGTAGCGTTAAGCAATTACCTAT
CACAGATCTTCCTATAACGCTTTACCCAGTTACACCTTTGCCCGAAGAGGTTACAACGATTGTCGCGGATTATGAGGTTA
ATATCCTAAATTTAGTCCCGGAGGATATTAAGTCAAACCTAACTCGAAATAATATTGAACTGATATTACCAAATCCTCAT
GTCTTCATTACTTTTGATGAGAGAAAAGGTATCTACAAATATGTTTTATTAGAACCACCGGTTAATGAAATGATCTATAA
TATCTACAATATATTTATAGAGGAAGTGGAGAGAGAACTGCTTTCTAAGAATCCCTCTTTAGATCTTGCAAAAATTATAT
TCGAACTGGATAAGAAAAGGTCAGGTCTTAAAATTATCCAAGAGAAGAGAGGAGATATCTACGTTTTGAGTACAAATGCT
AGAGTTACTTTGTACTATTTATTAAGAAACATGTTCGGATACAACGTATTAACCCCACTTGTAGCTGATAAAAATATAGA
AGATATTTCGGTTCCTGGTCTAAATAATCCAGTCTATGTATATCATAGAAGTTATGAATATATTCCAACTAATATTATAT
TTACTAAGAACATGCAAGTATCTCCACAACTTAATATAATGATAGATGGTGAGGAACTGCTAGATCAATTGGTTCTAAGA
ATGCTTTCTACTACAGGTAAGTCAATTTCTGTTGCTGAACCAATACAAGACGGTATGTTACCAAATGGTGATAGGGTTGC
CGCAACATTTAGCGGTAGACCCAAAATCACCTCCATAAAAATAAATCTATAG

Upstream 100 bases:

>100_bases
CGGCAGTTTTAGTAGTTATTACCGCAGTGCTGGTAATCATTTCATTACATATATCACTAATACCTTCTATATCTCCTTCC
TCGACATCTTTATAACCTAG

Downstream 100 bases:

>100_bases
TATTAATAAGTGTTTCCTCAAGATTAAATATAAAATCCTTTAGATCAGATAAATCGTCTAGAAAGCAGAGGATGAGCAGC
AATCTAAACTCCTCTCTTGT

Product: Type II secretion system protein, virB homolog (gspE-3)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MGEWYIMSKIFKFPLQIGRGSVKQLPITDLPITLYPVTPLPEEVTTIVADYEVNILNLVPEDIKSNLTRNNIELILPNPH
VFITFDERKGIYKYVLLEPPVNEMIYNIYNIFIEEVERELLSKNPSLDLAKIIFELDKKRSGLKIIQEKRGDIYVLSTNA
RVTLYYLLRNMFGYNVLTPLVADKNIEDISVPGLNNPVYVYHRSYEYIPTNIIFTKNMQVSPQLNIMIDGEELLDQLVLR
MLSTTGKSISVAEPIQDGMLPNGDRVAATFSGRPKITSIKINL

Sequences:

>Translated_283_residues
MGEWYIMSKIFKFPLQIGRGSVKQLPITDLPITLYPVTPLPEEVTTIVADYEVNILNLVPEDIKSNLTRNNIELILPNPH
VFITFDERKGIYKYVLLEPPVNEMIYNIYNIFIEEVERELLSKNPSLDLAKIIFELDKKRSGLKIIQEKRGDIYVLSTNA
RVTLYYLLRNMFGYNVLTPLVADKNIEDISVPGLNNPVYVYHRSYEYIPTNIIFTKNMQVSPQLNIMIDGEELLDQLVLR
MLSTTGKSISVAEPIQDGMLPNGDRVAATFSGRPKITSIKINL
>Mature_282_residues
GEWYIMSKIFKFPLQIGRGSVKQLPITDLPITLYPVTPLPEEVTTIVADYEVNILNLVPEDIKSNLTRNNIELILPNPHV
FITFDERKGIYKYVLLEPPVNEMIYNIYNIFIEEVERELLSKNPSLDLAKIIFELDKKRSGLKIIQEKRGDIYVLSTNAR
VTLYYLLRNMFGYNVLTPLVADKNIEDISVPGLNNPVYVYHRSYEYIPTNIIFTKNMQVSPQLNIMIDGEELLDQLVLRM
LSTTGKSISVAEPIQDGMLPNGDRVAATFSGRPKITSIKINL

Specific function: Unknown

COG id: COG0630

COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32381; Mature: 32250

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEWYIMSKIFKFPLQIGRGSVKQLPITDLPITLYPVTPLPEEVTTIVADYEVNILNLVP
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHEEEECCEEEEEECCC
EDIKSNLTRNNIELILPNPHVFITFDERKGIYKYVLLEPPVNEMIYNIYNIFIEEVEREL
HHHHCCCCCCCCEEEECCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
LSKNPSLDLAKIIFELDKKRSGLKIIQEKRGDIYVLSTNARVTLYYLLRNMFGYNVLTPL
HHCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCEEHHHHHHHHCCHHHHHHH
VADKNIEDISVPGLNNPVYVYHRSYEYIPTNIIFTKNMQVSPQLNIMIDGEELLDQLVLR
HCCCCCCEEECCCCCCCEEEEECCEEECCCEEEEECCEEECCEEEEEECHHHHHHHHHHH
MLSTTGKSISVAEPIQDGMLPNGDRVAATFSGRPKITSIKINL
HHHCCCCCEEECCCHHHCCCCCCCEEEEEECCCCEEEEEEEEC
>Mature Secondary Structure 
GEWYIMSKIFKFPLQIGRGSVKQLPITDLPITLYPVTPLPEEVTTIVADYEVNILNLVP
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHEEEECCEEEEEECCC
EDIKSNLTRNNIELILPNPHVFITFDERKGIYKYVLLEPPVNEMIYNIYNIFIEEVEREL
HHHHCCCCCCCCEEEECCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
LSKNPSLDLAKIIFELDKKRSGLKIIQEKRGDIYVLSTNARVTLYYLLRNMFGYNVLTPL
HHCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCEEHHHHHHHHCCHHHHHHH
VADKNIEDISVPGLNNPVYVYHRSYEYIPTNIIFTKNMQVSPQLNIMIDGEELLDQLVLR
HCCCCCCEEECCCCCCCEEEEECCEEECCCEEEEECCEEECCEEEEEECHHHHHHHHHHH
MLSTTGKSISVAEPIQDGMLPNGDRVAATFSGRPKITSIKINL
HHHCCCCCEEECCCHHHCCCCCCCEEEEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]