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The map label for this gene is nudF [H]

Identifier: 15899046

GI number: 15899046

Start: 2088749

End: 2089243

Strand: Direct

Name: nudF [H]

Synonym: SSO2278

Alternate gene names: 15899046

Gene position: 2088749-2089243 (Clockwise)

Preceding gene: 15899044

Following gene: 15899050

Centisome position: 69.81

GC content: 37.37

Gene sequence:

>495_bases
TTGATATTGTTACTGATCTCATACACAATACACCATAAATCACTTAATATTAACTTTTATCATTATTTTATGGATAGGCC
TTTAGTAGCTGTAGGTTGCCTTATTGTTGAAGAAAACAAGGTTCTTCTAGTCCAAAGGAAGAACCCTCCAAATGCTGGGT
TATGGGCGATACCAGGCGGTAAAGTAGAGTACGGGGAAACGTTAGAAGAGGCGTTGAAGAGAGAGATGAGGGAGGAAACT
GGACTTGAAGTAGCTGTGGGTAACATTATATCTATTGTACAAGTAATAAATGAAGGTTTTCACTACGTGATTCTAGACTT
TGAATGCAAACCAATAGGCGGGAATCTTCGTGCCTCCACTGATGCCGTAAAAGTAGAATATGTACCTTTTGACAAATTAA
ATATTATACAAACTACAAAAACTACCTACGACATGCTGAGTATGTACTTTAGAGGAGAAAAGCCACCATATTTCATCATT
CAAATCTCCAAGTAG

Upstream 100 bases:

>100_bases
GTTATGGAAGTAGGTATAGTTGTAGTATTAACGATAGTAGTATTGGCTTGAGTAATTATCAATGAACCTAAAATTCCCCA
TGTAATTATTAGGGCCAAGA

Downstream 100 bases:

>100_bases
ATTTATCCTTACTGTCTAATATCCTTACTCCAGCCTTTAGTAATTCTTCCCTTATCTTATCTGAAATTTCGTATAATTTC
ATCTGTCTCAATTGATTTCT

Product: MutT-like protein

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MILLLISYTIHHKSLNINFYHYFMDRPLVAVGCLIVEENKVLLVQRKNPPNAGLWAIPGGKVEYGETLEEALKREMREET
GLEVAVGNIISIVQVINEGFHYVILDFECKPIGGNLRASTDAVKVEYVPFDKLNIIQTTKTTYDMLSMYFRGEKPPYFII
QISK

Sequences:

>Translated_164_residues
MILLLISYTIHHKSLNINFYHYFMDRPLVAVGCLIVEENKVLLVQRKNPPNAGLWAIPGGKVEYGETLEEALKREMREET
GLEVAVGNIISIVQVINEGFHYVILDFECKPIGGNLRASTDAVKVEYVPFDKLNIIQTTKTTYDMLSMYFRGEKPPYFII
QISK
>Mature_164_residues
MILLLISYTIHHKSLNINFYHYFMDRPLVAVGCLIVEENKVLLVQRKNPPNAGLWAIPGGKVEYGETLEEALKREMREET
GLEVAVGNIISIVQVINEGFHYVILDFECKPIGGNLRASTDAVKVEYVPFDKLNIIQTTKTTYDMLSMYFRGEKPPYFII
QISK

Specific function: Specific For Pyrimidine Substrates. Acts On 5-Methyl- Dctp, Ctp And Dctp In Decreasing Order. [C]

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 18739; Mature: 18739

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLLISYTIHHKSLNINFYHYFMDRPLVAVGCLIVEENKVLLVQRKNPPNAGLWAIPGG
CEEEEEEEEEEEEEEEEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCCCCCEEECCCC
KVEYGETLEEALKREMREETGLEVAVGNIISIVQVINEGFHYVILDFECKPIGGNLRAST
CCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEECC
DAVKVEYVPFDKLNIIQTTKTTYDMLSMYFRGEKPPYFIIQISK
CEEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure
MILLLISYTIHHKSLNINFYHYFMDRPLVAVGCLIVEENKVLLVQRKNPPNAGLWAIPGG
CEEEEEEEEEEEEEEEEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCCCCCEEECCCC
KVEYGETLEEALKREMREETGLEVAVGNIISIVQVINEGFHYVILDFECKPIGGNLRAST
CCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEECC
DAVKVEYVPFDKLNIIQTTKTTYDMLSMYFRGEKPPYFIIQISK
CEEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]