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The map label for this gene is dtdA

Identifier: 15899009

GI number: 15899009

Start: 2052124

End: 2052840

Strand: Direct

Name: dtdA

Synonym: SSO2234

Alternate gene names: 15899009

Gene position: 2052124-2052840 (Clockwise)

Preceding gene: 15899008

Following gene: 15899011

Centisome position: 68.58

GC content: 34.59

Gene sequence:

>717_bases
ATGGACATTAAGCTAGTTTATTCTACTTTGGATCCCGTAGGTGTGACGATAAAGAAATTGGGATATCGATTCGAGGAAAT
AAATGAGGATGTAACTGATTTTCACTATGAGAATGGAGAAGCCATAGTAATCTTTTCCAGACATGAAAGTAAAGCAGGTA
TTCCCTCACTTACCGTACATTATCCCGGAAATCCATCTGAAGAAATTATGGGTGGAGAACCTAAAAAGCTTGGAATAGCG
TATCCTAGGCTACTTACCTCAATTTTAAGGGAAATTAAAAAGATCGATCTGAATATAGAGAAAACCATGGAAGCTACTCA
TCATGGCCCCACCTATCAAAATGTTCCAGTTATATTTGTGGAAGTAGGAAGTAATGAGACGTATTGGACTAACGACACAA
TAGTTAAAGCGCTAGTTGATTCAACTATAAGAAGTATTGATAAGGTAGATGAGATAGATTGTGAATATTATATTTCAGGT
TTTGGTGGACCTCACTATTCTAGGCTTTTTACTAAGCTAGCTGACGAGAGTTGCATAGGCCATGTGATTTCTAAGCACTA
TATTGATAAGTTAGATGATAAAGTTATAATTCAAACTATAACCAACTCAGTGAATACCATTAATAAAGTCGTAATCGATA
GCTTAAACTCTAAGCAGAAAGAACGAATTATAGCTTCACTAAAAAAATTAAATAATATTAATATCGAGTTTCGATAG

Upstream 100 bases:

>100_bases
GTAAAGAAGATTTATTCAAATGGCATATTAATTACAGGTCATAGGTTTGGTTTTGCGTTAGCTCCAATTCTTGCTGAGAA
AGCTATACAGATGATCAAAT

Downstream 100 bases:

>100_bases
TATTTGTTGAGTTAATAATGGTGAACCTATACTAATGATTCTACAACTATCAATGTTATTATCACATCTTAAAATAGTAA
AACTAGCATTTGGTATTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MDIKLVYSTLDPVGVTIKKLGYRFEEINEDVTDFHYENGEAIVIFSRHESKAGIPSLTVHYPGNPSEEIMGGEPKKLGIA
YPRLLTSILREIKKIDLNIEKTMEATHHGPTYQNVPVIFVEVGSNETYWTNDTIVKALVDSTIRSIDKVDEIDCEYYISG
FGGPHYSRLFTKLADESCIGHVISKHYIDKLDDKVIIQTITNSVNTINKVVIDSLNSKQKERIIASLKKLNNINIEFR

Sequences:

>Translated_238_residues
MDIKLVYSTLDPVGVTIKKLGYRFEEINEDVTDFHYENGEAIVIFSRHESKAGIPSLTVHYPGNPSEEIMGGEPKKLGIA
YPRLLTSILREIKKIDLNIEKTMEATHHGPTYQNVPVIFVEVGSNETYWTNDTIVKALVDSTIRSIDKVDEIDCEYYISG
FGGPHYSRLFTKLADESCIGHVISKHYIDKLDDKVIIQTITNSVNTINKVVIDSLNSKQKERIIASLKKLNNINIEFR
>Mature_238_residues
MDIKLVYSTLDPVGVTIKKLGYRFEEINEDVTDFHYENGEAIVIFSRHESKAGIPSLTVHYPGNPSEEIMGGEPKKLGIA
YPRLLTSILREIKKIDLNIEKTMEATHHGPTYQNVPVIFVEVGSNETYWTNDTIVKALVDSTIRSIDKVDEIDCEYYISG
FGGPHYSRLFTKLADESCIGHVISKHYIDKLDDKVIIQTITNSVNTINKVVIDSLNSKQKERIIASLKKLNNINIEFR

Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)

COG id: COG1650

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dtdA deacylase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DTDA_SULSO (Q97WI2)

Other databases:

- EMBL:   AE006641
- PIR:   E90393
- RefSeq:   NP_343614.1
- ProteinModelPortal:   Q97WI2
- SMR:   Q97WI2
- GeneID:   1453731
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO2234
- NMPDR:   fig|273057.1.peg.2037
- HOGENOM:   HBG553831
- OMA:   CYEATHH
- ProtClustDB:   PRK03995
- BioCyc:   SSOL273057:SSO2234-MONOMER
- HAMAP:   MF_00562
- InterPro:   IPR007508
- InterPro:   IPR018033
- PIRSF:   PIRSF016210

Pfam domain/function: PF04414 tRNA_deacylase

EC number: NA

Molecular weight: Translated: 26959; Mature: 26959

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKLVYSTLDPVGVTIKKLGYRFEEINEDVTDFHYENGEAIVIFSRHESKAGIPSLTVH
CCEEEEEECCCCHHHHHHHHCCHHHHHCCHHHHHEECCCCEEEEEECCCCCCCCCEEEEE
YPGNPSEEIMGGEPKKLGIAYPRLLTSILREIKKIDLNIEKTMEATHHGPTYQNVPVIFV
CCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEE
EVGSNETYWTNDTIVKALVDSTIRSIDKVDEIDCEYYISGFGGPHYSRLFTKLADESCIG
EECCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHH
HVISKHYIDKLDDKVIIQTITNSVNTINKVVIDSLNSKQKERIIASLKKLNNINIEFR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEC
>Mature Secondary Structure
MDIKLVYSTLDPVGVTIKKLGYRFEEINEDVTDFHYENGEAIVIFSRHESKAGIPSLTVH
CCEEEEEECCCCHHHHHHHHCCHHHHHCCHHHHHEECCCCEEEEEECCCCCCCCCEEEEE
YPGNPSEEIMGGEPKKLGIAYPRLLTSILREIKKIDLNIEKTMEATHHGPTYQNVPVIFV
CCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEE
EVGSNETYWTNDTIVKALVDSTIRSIDKVDEIDCEYYISGFGGPHYSRLFTKLADESCIG
EECCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHH
HVISKHYIDKLDDKVIIQTITNSVNTINKVVIDSLNSKQKERIIASLKKLNNINIEFR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726