| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is yjjX [C]
Identifier: 15899005
GI number: 15899005
Start: 2049579
End: 2050109
Strand: Direct
Name: yjjX [C]
Synonym: SSO2230
Alternate gene names: 15899005
Gene position: 2049579-2050109 (Clockwise)
Preceding gene: 15899003
Following gene: 15899008
Centisome position: 68.5
GC content: 33.71
Gene sequence:
>531_bases ATGGTAACCATTGCCTTAGGTAGTAAAAACCCTGTAAAAATCAGTGCTACTAAGGAGGCATTGGAGATTTTAAGGTTGAA TTGGGACTTAATAGCAACTGATATCGATAGTGGGGTAGATAAACAACCTTTTTGTGATCAAACGTATGTTGGTGCTAGAA ATAGGGCATTGAACGCGATAAAGGCTACCAATGCAGATATAGGATTAGGGATAGAGGGAGGGGTTTGCAACGTCTACGGT AAGTTTATAGCAAATGCTGTTGTATATGTTATCACTAAAGAAGGTGTAGAGAACTTTGCAATTTCATCATCTTTTACCTT ACCTAGTTCTATTGTTTCTTTAATACTTCAAGGAAAGGAATTGGGCGAAGCGTCAGATATTATTTTTAAAACTATTAATA GTAAGACTAAGGAAGGAGCTGTGGGACTATTAACTAATAATATAATTGATAGAAAAACACTTTATGTCCAACCTATTATT CTCGCATTATATCCAATTTATAATACAATTATCAATAATACTCTTTTTTAA
Upstream 100 bases:
>100_bases TATATTTTAACATAACGATATATAAGTGTAATTTAACATACGTCCATAATGCTTTCCATTAATAACTTATTAAAATGCTT GCAAATATTAACTTTACGAA
Downstream 100 bases:
>100_bases CTAGTTTTATAAACAATTCACCTATCTCATGCAGTTTTACGGTCTCATGTTCTGAAGGTCTTGGAATTGTTGCTAGAAAT ACTCCATAATCCTCGTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MVTIALGSKNPVKISATKEALEILRLNWDLIATDIDSGVDKQPFCDQTYVGARNRALNAIKATNADIGLGIEGGVCNVYG KFIANAVVYVITKEGVENFAISSSFTLPSSIVSLILQGKELGEASDIIFKTINSKTKEGAVGLLTNNIIDRKTLYVQPII LALYPIYNTIINNTLF
Sequences:
>Translated_176_residues MVTIALGSKNPVKISATKEALEILRLNWDLIATDIDSGVDKQPFCDQTYVGARNRALNAIKATNADIGLGIEGGVCNVYG KFIANAVVYVITKEGVENFAISSSFTLPSSIVSLILQGKELGEASDIIFKTINSKTKEGAVGLLTNNIIDRKTLYVQPII LALYPIYNTIINNTLF >Mature_176_residues MVTIALGSKNPVKISATKEALEILRLNWDLIATDIDSGVDKQPFCDQTYVGARNRALNAIKATNADIGLGIEGGVCNVYG KFIANAVVYVITKEGVENFAISSSFTLPSSIVSLILQGKELGEASDIIFKTINSKTKEGAVGLLTNNIIDRKTLYVQPII LALYPIYNTIINNTLF
Specific function: Unknown
COG id: COG1986
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0244 family
Homologues:
Organism=Escherichia coli, GI87082442, Length=174, Percent_Identity=32.7586206896552, Blast_Score=71, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2230_SULSO (Q97WI6)
Other databases:
- EMBL: AE006641 - PIR: A90393 - RefSeq: NP_343610.1 - ProteinModelPortal: Q97WI6 - GeneID: 1453727 - GenomeReviews: AE006641_GR - KEGG: sso:SSO2230 - NMPDR: fig|273057.1.peg.2033 - HOGENOM: HBG541017 - OMA: ATFAYIA - ProtClustDB: CLSK803263 - BioCyc: SSOL273057:SSO2230-MONOMER - HAMAP: MF_00648 - InterPro: IPR002786
Pfam domain/function: PF01931 DUF84
EC number: NA
Molecular weight: Translated: 19011; Mature: 19011
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTIALGSKNPVKISATKEALEILRLNWDLIATDIDSGVDKQPFCDQTYVGARNRALNAI CEEEEECCCCCEEEEEHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH KATNADIGLGIEGGVCNVYGKFIANAVVYVITKEGVENFAISSSFTLPSSIVSLILQGKE CCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCEEECCCCCCHHHHHHHHHCCCC LGEASDIIFKTINSKTKEGAVGLLTNNIIDRKTLYVQPIILALYPIYNTIINNTLF CCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVTIALGSKNPVKISATKEALEILRLNWDLIATDIDSGVDKQPFCDQTYVGARNRALNAI CEEEEECCCCCEEEEEHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH KATNADIGLGIEGGVCNVYGKFIANAVVYVITKEGVENFAISSSFTLPSSIVSLILQGKE CCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCEEECCCCCCHHHHHHHHHCCCC LGEASDIIFKTINSKTKEGAVGLLTNNIIDRKTLYVQPIILALYPIYNTIINNTLF CCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11427726