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The map label for this gene is ybbK [C]

Identifier: 15898972

GI number: 15898972

Start: 2018018

End: 2018821

Strand: Direct

Name: ybbK [C]

Synonym: SSO2195

Alternate gene names: 15898972

Gene position: 2018018-2018821 (Clockwise)

Preceding gene: 15898971

Following gene: 15898978

Centisome position: 67.44

GC content: 36.07

Gene sequence:

>804_bases
TTGGCTATAAGCATAGGAGATATAGTAGGTATAGTATTTCTTATCATTATAATAATCATCTTTATCGCCATGTCATTTAG
GGTAGTTAGAGAATGGGAGAGAGCCGTTGTATTAAGATTGGGGAGATTTTTGAGAGTTAAAGGCCCTGGAATCATATTCC
TTATACCCTTTGTTGATAGGCCATTAGTAGTGGATCTAAGAGTGAATACTGTTGAGGTTCCACCTCAAACTATCTTAACT
AAAGATAACGTTACTGTAAGTGTAGACGCGGTTGTATACTATAAGGTTGTTGATCCACAGAAAGCAGTATTAAGTGTTTT
CAATTATAATGTGGCAGTACTAAATTTAGCTCAGACCTCATTAAGGGATATTGTTGGACAAATGGAATTGGATGAGTTAC
TAAGTAAAAGGGAAGAAATCAATAAGAGGATACAAGAAATATTAGACGTCACAACTGAAGGATGGGGAATCAAAGTTACT
GCTGTAACTATAAGAGATATTAGATTATCTCAAGATCTGTTATCTGCTATGGCAAAGCAAGCTGAGGCAGAGAGATTGAG
AAGAGCAAAGGTAATACTAAGTGAAGGTGAAAGGCAAGCTGCAAGTATTTTAGCTGATGCATCAGCTTACTACAAGAATA
ATCCATCAGCATTACAGTTGAGATTTTTAGAAACATTATCAGACATCTCACAAAGAGGAGGTTTAATAATAGTAGTTCCT
GCAGGGAATGAAATATACCCTACTCTAGGTACAAGCGCCGCATTATCAACTCTCTCAAAAAAGTTTCAAACTGAAACCAA
GTAA

Upstream 100 bases:

>100_bases
GTATATCGTACTTTATATCTTAGCTTTTGTAATAGGTATGGTAATTTCAGCAATATTAATAAGGTTCAAATTATAGTTAT
ATATTTGGAGGTAGTAAGAT

Downstream 100 bases:

>100_bases
TCAGCTGGACTAGGAGTATTCATCCATCATTTACGTCTTCCTCATCATTAGCTCTGCTAGCTTATCGTTTATATCTAAAT
AGTTTTCTCTAGCTAAGTTA

Product: erythrocyte band 7 membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MAISIGDIVGIVFLIIIIIIFIAMSFRVVREWERAVVLRLGRFLRVKGPGIIFLIPFVDRPLVVDLRVNTVEVPPQTILT
KDNVTVSVDAVVYYKVVDPQKAVLSVFNYNVAVLNLAQTSLRDIVGQMELDELLSKREEINKRIQEILDVTTEGWGIKVT
AVTIRDIRLSQDLLSAMAKQAEAERLRRAKVILSEGERQAASILADASAYYKNNPSALQLRFLETLSDISQRGGLIIVVP
AGNEIYPTLGTSAALSTLSKKFQTETK

Sequences:

>Translated_267_residues
MAISIGDIVGIVFLIIIIIIFIAMSFRVVREWERAVVLRLGRFLRVKGPGIIFLIPFVDRPLVVDLRVNTVEVPPQTILT
KDNVTVSVDAVVYYKVVDPQKAVLSVFNYNVAVLNLAQTSLRDIVGQMELDELLSKREEINKRIQEILDVTTEGWGIKVT
AVTIRDIRLSQDLLSAMAKQAEAERLRRAKVILSEGERQAASILADASAYYKNNPSALQLRFLETLSDISQRGGLIIVVP
AGNEIYPTLGTSAALSTLSKKFQTETK
>Mature_266_residues
AISIGDIVGIVFLIIIIIIFIAMSFRVVREWERAVVLRLGRFLRVKGPGIIFLIPFVDRPLVVDLRVNTVEVPPQTILTK
DNVTVSVDAVVYYKVVDPQKAVLSVFNYNVAVLNLAQTSLRDIVGQMELDELLSKREEINKRIQEILDVTTEGWGIKVTA
VTIRDIRLSQDLLSAMAKQAEAERLRRAKVILSEGERQAASILADASAYYKNNPSALQLRFLETLSDISQRGGLIIVVPA
GNEIYPTLGTSAALSTLSKKFQTETK

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI38016911, Length=231, Percent_Identity=45.8874458874459, Blast_Score=184, Evalue=6e-47,
Organism=Homo sapiens, GI221316744, Length=242, Percent_Identity=44.6280991735537, Blast_Score=179, Evalue=3e-45,
Organism=Homo sapiens, GI21686995, Length=242, Percent_Identity=44.6280991735537, Blast_Score=178, Evalue=4e-45,
Organism=Homo sapiens, GI7657615, Length=265, Percent_Identity=33.2075471698113, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI7305503, Length=174, Percent_Identity=39.0804597701149, Blast_Score=124, Evalue=6e-29,
Organism=Homo sapiens, GI20149563, Length=158, Percent_Identity=32.2784810126582, Blast_Score=88, Evalue=8e-18,
Organism=Escherichia coli, GI1786697, Length=204, Percent_Identity=36.7647058823529, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1790616, Length=198, Percent_Identity=26.7676767676768, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17569493, Length=236, Percent_Identity=47.0338983050847, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI193209764, Length=236, Percent_Identity=47.0338983050847, Blast_Score=188, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17569497, Length=235, Percent_Identity=40.8510638297872, Blast_Score=185, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI25153583, Length=238, Percent_Identity=46.6386554621849, Blast_Score=184, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI71987612, Length=235, Percent_Identity=45.9574468085106, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI71987621, Length=235, Percent_Identity=45.9574468085106, Blast_Score=182, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI193210507, Length=255, Percent_Identity=44.3137254901961, Blast_Score=178, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI17570161, Length=255, Percent_Identity=44.3137254901961, Blast_Score=177, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI32566490, Length=228, Percent_Identity=45.6140350877193, Blast_Score=177, Evalue=7e-45,
Organism=Caenorhabditis elegans, GI17569499, Length=255, Percent_Identity=41.9607843137255, Blast_Score=172, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI71989948, Length=224, Percent_Identity=44.1964285714286, Blast_Score=165, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17570459, Length=240, Percent_Identity=40, Blast_Score=158, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI71989955, Length=180, Percent_Identity=46.6666666666667, Blast_Score=143, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI32564147, Length=177, Percent_Identity=37.8531073446328, Blast_Score=121, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI71989963, Length=119, Percent_Identity=48.7394957983193, Blast_Score=111, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17542664, Length=188, Percent_Identity=28.1914893617021, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI45556022, Length=253, Percent_Identity=45.4545454545455, Blast_Score=195, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24657857, Length=234, Percent_Identity=47.4358974358974, Blast_Score=187, Evalue=9e-48,
Organism=Drosophila melanogaster, GI281365664, Length=234, Percent_Identity=47.4358974358974, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI62484448, Length=232, Percent_Identity=48.2758620689655, Blast_Score=185, Evalue=2e-47,
Organism=Drosophila melanogaster, GI62484274, Length=232, Percent_Identity=48.2758620689655, Blast_Score=184, Evalue=5e-47,
Organism=Drosophila melanogaster, GI18860517, Length=250, Percent_Identity=45.6, Blast_Score=184, Evalue=6e-47,
Organism=Drosophila melanogaster, GI28573263, Length=236, Percent_Identity=40.6779661016949, Blast_Score=172, Evalue=2e-43,
Organism=Drosophila melanogaster, GI281361631, Length=240, Percent_Identity=37.9166666666667, Blast_Score=163, Evalue=1e-40,
Organism=Drosophila melanogaster, GI281361633, Length=240, Percent_Identity=37.9166666666667, Blast_Score=162, Evalue=2e-40,
Organism=Drosophila melanogaster, GI21356845, Length=238, Percent_Identity=35.7142857142857, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI45550506, Length=180, Percent_Identity=40, Blast_Score=135, Evalue=2e-32,
Organism=Drosophila melanogaster, GI281361635, Length=175, Percent_Identity=38.8571428571429, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24585145, Length=241, Percent_Identity=27.3858921161826, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24585147, Length=241, Percent_Identity=27.3858921161826, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 29664; Mature: 29533

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISIGDIVGIVFLIIIIIIFIAMSFRVVREWERAVVLRLGRFLRVKGPGIIFLIPFVDR
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCC
PLVVDLRVNTVEVPPQTILTKDNVTVSVDAVVYYKVVDPQKAVLSVFNYNVAVLNLAQTS
CEEEEEEEEEEECCCHHEEECCCEEEEEEEEEEEEEECHHHHHHHHHCCCEEEEEHHHHH
LRDIVGQMELDELLSKREEINKRIQEILDVTTEGWGIKVTAVTIRDIRLSQDLLSAMAKQ
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHH
AEAERLRRAKVILSEGERQAASILADASAYYKNNPSALQLRFLETLSDISQRGGLIIVVP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
AGNEIYPTLGTSAALSTLSKKFQTETK
CCCEECCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AISIGDIVGIVFLIIIIIIFIAMSFRVVREWERAVVLRLGRFLRVKGPGIIFLIPFVDR
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCC
PLVVDLRVNTVEVPPQTILTKDNVTVSVDAVVYYKVVDPQKAVLSVFNYNVAVLNLAQTS
CEEEEEEEEEEECCCHHEEECCCEEEEEEEEEEEEEECHHHHHHHHHCCCEEEEEHHHHH
LRDIVGQMELDELLSKREEINKRIQEILDVTTEGWGIKVTAVTIRDIRLSQDLLSAMAKQ
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHH
AEAERLRRAKVILSEGERQAASILADASAYYKNNPSALQLRFLETLSDISQRGGLIIVVP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
AGNEIYPTLGTSAALSTLSKKFQTETK
CCCEECCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]