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The map label for this gene is 15898782

Identifier: 15898782

GI number: 15898782

Start: 1798944

End: 1799870

Strand: Direct

Name: 15898782

Synonym: SSO1987

Alternate gene names: NA

Gene position: 1798944-1799870 (Clockwise)

Preceding gene: 15898781

Following gene: 15898783

Centisome position: 60.12

GC content: 34.63

Gene sequence:

>927_bases
GTGATTATAATGACTTATTACACTTTTGTTAAACCTTTTTTTATTAAGGCAGTAACTCACTTGCATGTAAGTTCTGGAAC
ATCTGTAGAAGAGGAAGTAGATTTACCTTTTCAAAGAGATGAGTTAAACTATCCCACAATATTTGCATCTAGTCTTAAGG
GTGCAATAAAATCGTTCCTACTAAAGGAATATAGTAATGCAAGAGAAATAATTTATAAGGTTTTAGGTTCTGACGAAAAT
CCTGACGAAGCCTCTCTAGGATCTTTTTTGGATGCAGTTCTTTTTGCTATTCCTGCCAGAAGTATAGGCGTTAGCGGTCT
CGATGAAGCATGGGTTTATGTTACCACGTATGAACTTCTCAGGAAGGTAAAATCACTTCTAGAATCGATGAACACTTTAT
CCGCTACACAATTTACCTCTCTTCTGGACGCTATTAATAACATTCTCCAAGAGAGTAAAAATTTGATAATTTCTGATAAT
GCGGCTAGTGTGATCTTAAACGAGGACTTTTACGTAGAATTGAGTAATATTCAAAACGAGTATATTCAGTCTCTTTTAGG
AGACATGCTAATTGAGAATTCAACGTATAACCAGAGTAACCAAAATTCTCAGTCTCAAGGAAACCACTTAGTAAAGCCTT
TAATAGTCCTTAAGGATTCAATAGGTAGGGAAGTGATTAATAGGTCATTAATAAGAGTGAGAAGGATAAAAATTAAGAGA
AGTAGTAAAACCGTGGAAGAAGGTGGTTTATGGTCTGAAGAATATGTTCCAGTGAACTCATTGTTCTTTTCCTCTTTTTT
AGCTAGAGGAAGTAAGGATACCGCATATTTTGCTGACTGTATTTTAAGGAAAACAAGATACTTAATTTTAGGAGGTAAGG
AAACTATAGGTAAAGGAATTGTTGAATTGAGGTGGTTAAATGACTGA

Upstream 100 bases:

>100_bases
AATAAAGAGCAAAAGGATAAGCTTTATAGGGATGTAGAAGAAATATTCAACTACTATTCAATAAAAAGTTTAAAATCGAA
TCCCTAAGATATATTGCTAA

Downstream 100 bases:

>100_bases
AGTACAAGAGGAGAAAGATTATAAACTAGCTATTGAGGCATTTAACCTAGTCTATAATGCTCTAGATAAGAAGGCTAGAG
AAAAATTTAGGAGTAGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Cmr4 Family Protein Family Protein

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MIIMTYYTFVKPFFIKAVTHLHVSSGTSVEEEVDLPFQRDELNYPTIFASSLKGAIKSFLLKEYSNAREIIYKVLGSDEN
PDEASLGSFLDAVLFAIPARSIGVSGLDEAWVYVTTYELLRKVKSLLESMNTLSATQFTSLLDAINNILQESKNLIISDN
AASVILNEDFYVELSNIQNEYIQSLLGDMLIENSTYNQSNQNSQSQGNHLVKPLIVLKDSIGREVINRSLIRVRRIKIKR
SSKTVEEGGLWSEEYVPVNSLFFSSFLARGSKDTAYFADCILRKTRYLILGGKETIGKGIVELRWLND

Sequences:

>Translated_308_residues
MIIMTYYTFVKPFFIKAVTHLHVSSGTSVEEEVDLPFQRDELNYPTIFASSLKGAIKSFLLKEYSNAREIIYKVLGSDEN
PDEASLGSFLDAVLFAIPARSIGVSGLDEAWVYVTTYELLRKVKSLLESMNTLSATQFTSLLDAINNILQESKNLIISDN
AASVILNEDFYVELSNIQNEYIQSLLGDMLIENSTYNQSNQNSQSQGNHLVKPLIVLKDSIGREVINRSLIRVRRIKIKR
SSKTVEEGGLWSEEYVPVNSLFFSSFLARGSKDTAYFADCILRKTRYLILGGKETIGKGIVELRWLND
>Mature_308_residues
MIIMTYYTFVKPFFIKAVTHLHVSSGTSVEEEVDLPFQRDELNYPTIFASSLKGAIKSFLLKEYSNAREIIYKVLGSDEN
PDEASLGSFLDAVLFAIPARSIGVSGLDEAWVYVTTYELLRKVKSLLESMNTLSATQFTSLLDAINNILQESKNLIISDN
AASVILNEDFYVELSNIQNEYIQSLLGDMLIENSTYNQSNQNSQSQGNHLVKPLIVLKDSIGREVINRSLIRVRRIKIKR
SSKTVEEGGLWSEEYVPVNSLFFSSFLARGSKDTAYFADCILRKTRYLILGGKETIGKGIVELRWLND

Specific function: Unknown

COG id: COG1336

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34725; Mature: 34725

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIMTYYTFVKPFFIKAVTHLHVSSGTSVEEEVDLPFQRDELNYPTIFASSLKGAIKSFL
CEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LKEYSNAREIIYKVLGSDENPDEASLGSFLDAVLFAIPARSIGVSGLDEAWVYVTTYELL
HHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHH
RKVKSLLESMNTLSATQFTSLLDAINNILQESKNLIISDNAASVILNEDFYVELSNIQNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCEEEEHHHHHHH
YIQSLLGDMLIENSTYNQSNQNSQSQGNHLVKPLIVLKDSIGREVINRSLIRVRRIKIKR
HHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSKTVEEGGLWSEEYVPVNSLFFSSFLARGSKDTAYFADCILRKTRYLILGGKETIGKGI
CCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEECCHHHHCCCC
VELRWLND
EEEEECCC
>Mature Secondary Structure
MIIMTYYTFVKPFFIKAVTHLHVSSGTSVEEEVDLPFQRDELNYPTIFASSLKGAIKSFL
CEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LKEYSNAREIIYKVLGSDENPDEASLGSFLDAVLFAIPARSIGVSGLDEAWVYVTTYELL
HHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHH
RKVKSLLESMNTLSATQFTSLLDAINNILQESKNLIISDNAASVILNEDFYVELSNIQNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCEEEEHHHHHHH
YIQSLLGDMLIENSTYNQSNQNSQSQGNHLVKPLIVLKDSIGREVINRSLIRVRRIKIKR
HHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSKTVEEGGLWSEEYVPVNSLFFSSFLARGSKDTAYFADCILRKTRYLILGGKETIGKGI
CCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEECCHHHHCCCC
VELRWLND
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA