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The map label for this gene is 15898760

Identifier: 15898760

GI number: 15898760

Start: 1779283

End: 1779681

Strand: Direct

Name: 15898760

Synonym: SSO1964

Alternate gene names: NA

Gene position: 1779283-1779681 (Clockwise)

Preceding gene: 15898757

Following gene: 15898762

Centisome position: 59.46

GC content: 42.61

Gene sequence:

>399_bases
GTGGAGAGACTACTGAGGCCTAAGGAGGCTTGCCAACTGCTCAGCATTTCATACTCAACACTCCTACGGTGGATTAGAGA
AGGAAAAATAAAGGTGGTAACGACTGAAGGAGGGAAGTATAGGATACCTTACAGCGAGATAAAGAAGTACTTAGAGAAGA
GGGAAGAGACGAGGGCTGTAATTTATGCAAGAGTTTCGTCAGCAGACCAGAGAGAAGACTTGGAAAGACAAATAAACTAC
CTAACGAACTACGCAACGGCAAAGGGTTACAAGGTAGTTGAAGTACTGAAAGATATTGCAAGCGGGTTAAACACACAAAG
GAAAGGATTGCTTAAGTTATTCAAACTTGTTGAGGGGAGCTTCCGGTATAAAAACCTTTCCATGAAAAATCGAGCATAG

Upstream 100 bases:

>100_bases
ACTACCGCTCCCGTAGACGGCACGGGGAGGGAAATAAGGGCTGAATCCTTTCTCACGTTAATAGAAATCTTTTTATATTT
ATTTATTATCAACTAATCTT

Downstream 100 bases:

>100_bases
TCCACACTACTTACGCAAGTGATGAAACCTGCTTTACTCACTAGCATCAAAGGGCTTATTATAATACAGCACAGCCCAAG
TAATAACAGCCAATTTCCTT

Product: transposon ISC1913 Orf1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MERLLRPKEACQLLSISYSTLLRWIREGKIKVVTTEGGKYRIPYSEIKKYLEKREETRAVIYARVSSADQREDLERQINY
LTNYATAKGYKVVEVLKDIASGLNTQRKGLLKLFKLVEGSFRYKNLSMKNRA

Sequences:

>Translated_132_residues
MERLLRPKEACQLLSISYSTLLRWIREGKIKVVTTEGGKYRIPYSEIKKYLEKREETRAVIYARVSSADQREDLERQINY
LTNYATAKGYKVVEVLKDIASGLNTQRKGLLKLFKLVEGSFRYKNLSMKNRA
>Mature_132_residues
MERLLRPKEACQLLSISYSTLLRWIREGKIKVVTTEGGKYRIPYSEIKKYLEKREETRAVIYARVSSADQREDLERQINY
LTNYATAKGYKVVEVLKDIASGLNTQRKGLLKLFKLVEGSFRYKNLSMKNRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 15426; Mature: 15426

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLLRPKEACQLLSISYSTLLRWIREGKIKVVTTEGGKYRIPYSEIKKYLEKREETRAV
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHH
IYARVSSADQREDLERQINYLTNYATAKGYKVVEVLKDIASGLNTQRKGLLKLFKLVEGS
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
FRYKNLSMKNRA
CHHCCCCCCCCC
>Mature Secondary Structure
MERLLRPKEACQLLSISYSTLLRWIREGKIKVVTTEGGKYRIPYSEIKKYLEKREETRAV
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHH
IYARVSSADQREDLERQINYLTNYATAKGYKVVEVLKDIASGLNTQRKGLLKLFKLVEGS
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
FRYKNLSMKNRA
CHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]