Click here to switch to the map view.

The map label for this gene is 15898667

Identifier: 15898667

GI number: 15898667

Start: 1688414

End: 1688794

Strand: Direct

Name: 15898667

Synonym: SSO1874

Alternate gene names: NA

Gene position: 1688414-1688794 (Clockwise)

Preceding gene: 15898666

Following gene: 15898671

Centisome position: 56.43

GC content: 30.45

Gene sequence:

>381_bases
ATGATTAAAAAGATTGGTATAGGTTTTTCTTTAATTGGGTTGATAGATTCATTATACTTATTTATATTAACTAGGTTGGA
AAAACCATTAATGTACTGTAATATATCAAGCTTAGTTAATTGTAGCAAAGTAGAATTTAGCCAATTCTCTACCTTTCTAG
GAATACCTGATGCTCTCTTGGGAACAATCTTCTTCTCAATTATGCTGATTTTGTGGATATTAATGTTTACGGAGGAACTA
AAATATTTATGGATTGTAGGCAGCGTCTTTACGATCTATCTAATTTATACTGAAATTTTAATAGGGAACATATGCCTATA
TTGTACGATAGCTCACTTATCTTGCCTAATCCAAGGATTCATAATATTCCACAGATCATAG

Upstream 100 bases:

>100_bases
CTTACAACGTATGCTCTCACTTTATGCAAGCTAGTGTTAATAGTGATAGCAGTCTATTTTATGTGAGTACAAGTCTAAGG
ATCAACAGTGGTGATGATTT

Downstream 100 bases:

>100_bases
TACAAATTATGGAAATTTAAGGGATTAACAAACCTGATAGTCCATAATGCGTAATCTGCTAGCCTTTTACGCTTCATCTG
ATACCGTGAGTAGAATTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MIKKIGIGFSLIGLIDSLYLFILTRLEKPLMYCNISSLVNCSKVEFSQFSTFLGIPDALLGTIFFSIMLILWILMFTEEL
KYLWIVGSVFTIYLIYTEILIGNICLYCTIAHLSCLIQGFIIFHRS

Sequences:

>Translated_126_residues
MIKKIGIGFSLIGLIDSLYLFILTRLEKPLMYCNISSLVNCSKVEFSQFSTFLGIPDALLGTIFFSIMLILWILMFTEEL
KYLWIVGSVFTIYLIYTEILIGNICLYCTIAHLSCLIQGFIIFHRS
>Mature_126_residues
MIKKIGIGFSLIGLIDSLYLFILTRLEKPLMYCNISSLVNCSKVEFSQFSTFLGIPDALLGTIFFSIMLILWILMFTEEL
KYLWIVGSVFTIYLIYTEILIGNICLYCTIAHLSCLIQGFIIFHRS

Specific function: Unknown

COG id: COG4243

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14452; Mature: 14452

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKIGIGFSLIGLIDSLYLFILTRLEKPLMYCNISSLVNCSKVEFSQFSTFLGIPDALL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHCCCHHHHHHHHHHHCCHHHHH
GTIFFSIMLILWILMFTEELKYLWIVGSVFTIYLIYTEILIGNICLYCTIAHLSCLIQGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIFHRS
HHHCCC
>Mature Secondary Structure
MIKKIGIGFSLIGLIDSLYLFILTRLEKPLMYCNISSLVNCSKVEFSQFSTFLGIPDALL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHCCCHHHHHHHHHHHCCHHHHH
GTIFFSIMLILWILMFTEELKYLWIVGSVFTIYLIYTEILIGNICLYCTIAHLSCLIQGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIFHRS
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA