Click here to switch to the map view.

The map label for this gene is 15898660

Identifier: 15898660

GI number: 15898660

Start: 1683320

End: 1683934

Strand: Direct

Name: 15898660

Synonym: SSO1868

Alternate gene names: NA

Gene position: 1683320-1683934 (Clockwise)

Preceding gene: 15898659

Following gene: 15898662

Centisome position: 56.26

GC content: 35.12

Gene sequence:

>615_bases
ATGTTAAAATCACCATTTGAAGCAACAATCCTAATTGAGGAGCACCCTTGTGAAGTAATGAAGATAATATCTAGTACTGG
GCTTAAAGGTGTTGTTGATAACGTTAAACTTGGAGATAATACAACCGATCACATAGTACTTTTCGAAAAAGAGGTCCAAA
AAGATGATCTAATTAAGCTTAAATCGCATAGTACTAAGGTTTTAAGGCTTAACGATAACAAGATATGGGTTAGAACTTAC
GGATGTGCAGTATGTAAGATTCTATATACTTCAAACGTCGTTGTAGAGAAAATAAAGGTAGTAAGAGAGAGGACATTGCT
CTATACTCTCTTAATCCCTAATACGATGGCACTTAAGGAATTTCTGGCAAGCCTCATAAGTCAAGATATAGAGTTTACAG
TGCTAAGCACTTCTGAAATAAGTAGTAATGAGTTAACTGATAGACAAATGGAAATATTGAAGCTTGCGTATAAGATGGGT
TATTTCGATGACGATAGGAGGGTTACTTTAACTGAGCTAGCAAAACAATTGGGAATTTCTACACCAACTTTAGAGGAGAT
TTTGCGTAGGGCTTTAAGGAAAGTTGTCAAGTTTTACTTAGATAAGGTAAGATAG

Upstream 100 bases:

>100_bases
CTTTACTTTACGCTTCAAAGTCACCGTATAATAATGCAGTAGCGTTAAAGGAGTATCTAGAAAAAAAGATATTAAAACAA
TAGTTGAGATTCTTTATTAG

Downstream 100 bases:

>100_bases
ATTTTTTGTTTGGAATATTGAATGGAAGCAACAAATTTCATTCATTTGAAACTTAGTTTAAATTCCTCTAATACCAGTTC
CGCCAAATGTTTCAGTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Bacterio-Opsin Activator; Bacterio-Opsin Activator HTH Domain-Containing Protein

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLKSPFEATILIEEHPCEVMKIISSTGLKGVVDNVKLGDNTTDHIVLFEKEVQKDDLIKLKSHSTKVLRLNDNKIWVRTY
GCAVCKILYTSNVVVEKIKVVRERTLLYTLLIPNTMALKEFLASLISQDIEFTVLSTSEISSNELTDRQMEILKLAYKMG
YFDDDRRVTLTELAKQLGISTPTLEEILRRALRKVVKFYLDKVR

Sequences:

>Translated_204_residues
MLKSPFEATILIEEHPCEVMKIISSTGLKGVVDNVKLGDNTTDHIVLFEKEVQKDDLIKLKSHSTKVLRLNDNKIWVRTY
GCAVCKILYTSNVVVEKIKVVRERTLLYTLLIPNTMALKEFLASLISQDIEFTVLSTSEISSNELTDRQMEILKLAYKMG
YFDDDRRVTLTELAKQLGISTPTLEEILRRALRKVVKFYLDKVR
>Mature_204_residues
MLKSPFEATILIEEHPCEVMKIISSTGLKGVVDNVKLGDNTTDHIVLFEKEVQKDDLIKLKSHSTKVLRLNDNKIWVRTY
GCAVCKILYTSNVVVEKIKVVRERTLLYTLLIPNTMALKEFLASLISQDIEFTVLSTSEISSNELTDRQMEILKLAYKMG
YFDDDRRVTLTELAKQLGISTPTLEEILRRALRKVVKFYLDKVR

Specific function: Unknown

COG id: COG3413

COG function: function code R; Predicted DNA binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23425; Mature: 23425

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSPFEATILIEEHPCEVMKIISSTGLKGVVDNVKLGDNTTDHIVLFEKEVQKDDLIKL
CCCCCCCEEEEEECCCHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEEECCCCCCHHEEE
KSHSTKVLRLNDNKIWVRTYGCAVCKILYTSNVVVEKIKVVRERTLLYTLLIPNTMALKE
CCCCEEEEEEECCEEEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEECCCHHHHHH
FLASLISQDIEFTVLSTSEISSNELTDRQMEILKLAYKMGYFDDDRRVTLTELAKQLGIS
HHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCC
TPTLEEILRRALRKVVKFYLDKVR
CCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKSPFEATILIEEHPCEVMKIISSTGLKGVVDNVKLGDNTTDHIVLFEKEVQKDDLIKL
CCCCCCCEEEEEECCCHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEEECCCCCCHHEEE
KSHSTKVLRLNDNKIWVRTYGCAVCKILYTSNVVVEKIKVVRERTLLYTLLIPNTMALKE
CCCCEEEEEEECCEEEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEECCCHHHHHH
FLASLISQDIEFTVLSTSEISSNELTDRQMEILKLAYKMGYFDDDRRVTLTELAKQLGIS
HHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCC
TPTLEEILRRALRKVVKFYLDKVR
CCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA