Click here to switch to the map view.

The map label for this gene is 15898454

Identifier: 15898454

GI number: 15898454

Start: 1487906

End: 1489453

Strand: Direct

Name: 15898454

Synonym: SSO1636

Alternate gene names: NA

Gene position: 1487906-1489453 (Clockwise)

Preceding gene: 15898453

Following gene: 15898457

Centisome position: 49.73

GC content: 31.27

Gene sequence:

>1548_bases
ATGAAAGCAACACTCTTAATACCACTCTTGCTAATTAGTTTCTTTGCTTCTCCTCAACTCTTTCCTTCAAATGTTAGTTA
TGTTTTTGTTACTAATAATCTAATAGGAGTAGTGTATCATATTCAAAACACAACACAACTTTTCTTAATGAATTTAAGTG
GTTATACGATTAAGTTACCTTTAGAGGGGATAGCACATCTTTACTCTTACTCTAACTACTTGCTGGTTTTTGTAGAACCT
TATTTTAATGTAGTCTCAAATTTCATGACGTCTTTTCTTTTAAATGGTACAACAGTTTATGTGATAAATACATTAACCAT
GAAATACTATAAGCTAAATCTTAAGGAGTTAAGTGTAAATGTAAATAACTTTTATGGTGACAATGATGGAATTTATGCTT
TTAATGTAGCAAGCAAAATCTTATCAACTACAAATGAAGAAGTTTACGGTTACACAGTAGTTATACCTAAAGTTGAAATA
ATCATAAATGCATATAACTTAATAACCAATTCTACTAGAACAATATCATTTGTTACAACTGGTCTACCGTTGTCCTTTGA
GAAGGATGGCGAAAATTTCACAGGCAAACCCTATGCTGTTCTCAACCCTAATAATAACTTCCTCTATATCATAACGGCAA
ATAATAACCTCCAATACATTATTAACGTCATAAATCTAACTTCTGGTGGAGTAAGCGAGTTTAATGTTAGTTTTAATGGG
GAGATAGCAGATTTAACTCAAGACTACCTAACGTTCTATAATACCTCTGAAGTAATGCTCTATAATCCTATAAAGAATAT
TACTATTTCATATCCATTCTTATCTCCAGGATTAATAAGTATTTCTTGTGTTCCATCTACACCAAATCTTTATCCGCTAA
TAACTTACACCAATAAAAGCAATAATACCCTTGTCTCAACAATATTATCTTTTACCAATGGTGGAAAAAACATTTCCATA
GATAATATTCCCCTTATATTATTATGTCCAGCAATTACAGTAAGCGAATTAATTGATACGAACAGTCTTAAAATACCTTT
TTCCACTACCCCCAATGAAATTAAATTAAATTCAGTTCCAGTAAGTATTAACGGAAATGTTGTGCCATCAGTATCTGAGA
TTTACATCTTCGAATCTTCAGTACTTCTAAAAACCTCAAATGGCTATTTAGTTTATAATGATGGAAAATTAATTAATGGT
CAAGTAGTATCCGGCGTGGTTATTACCAACAGTAGCAACGTGAATTATGCCTACGAAAATGTTTTAGGGGTAAACCAGCC
AATTATTTTAATGAGTACGATCATAATTGGAGGCAAACCTTATTATATACCTGGGGGCAAATACATTGTCGGAAACATAG
GCAATAATGTAGTTCTTTATGGAAATGGAGAGATAAGCGTTATGCAAGTTAATGAATCAGAAAGTGGAATTCATGTTAAT
ACACCAGAACTATGGCTTAATATTGGAATAACTGCATTCATAACACTCGTATTATTAATAGTGGTAATTCCGCTTATTAA
ATTATTAAGAAAAAAAGGTGGTAAGTAA

Upstream 100 bases:

>100_bases
ATAATAATAGGTTTATCAAATTAATTTTTAAGATTAACATGATTTATTAGATATATTCTTACGAAAAAATATATAATCAT
TCTCCTCACCCTTTTCACAT

Downstream 100 bases:

>100_bases
GGAAATGAGAAACTTCTATAACATATAATCTTTTTTCCTGATAAACATGAAGGAGATTAGAAGAAAGATCCGAAACAATT
TTAGTGGAGATATGTCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MKATLLIPLLLISFFASPQLFPSNVSYVFVTNNLIGVVYHIQNTTQLFLMNLSGYTIKLPLEGIAHLYSYSNYLLVFVEP
YFNVVSNFMTSFLLNGTTVYVINTLTMKYYKLNLKELSVNVNNFYGDNDGIYAFNVASKILSTTNEEVYGYTVVIPKVEI
IINAYNLITNSTRTISFVTTGLPLSFEKDGENFTGKPYAVLNPNNNFLYIITANNNLQYIINVINLTSGGVSEFNVSFNG
EIADLTQDYLTFYNTSEVMLYNPIKNITISYPFLSPGLISISCVPSTPNLYPLITYTNKSNNTLVSTILSFTNGGKNISI
DNIPLILLCPAITVSELIDTNSLKIPFSTTPNEIKLNSVPVSINGNVVPSVSEIYIFESSVLLKTSNGYLVYNDGKLING
QVVSGVVITNSSNVNYAYENVLGVNQPIILMSTIIIGGKPYYIPGGKYIVGNIGNNVVLYGNGEISVMQVNESESGIHVN
TPELWLNIGITAFITLVLLIVVIPLIKLLRKKGGK

Sequences:

>Translated_515_residues
MKATLLIPLLLISFFASPQLFPSNVSYVFVTNNLIGVVYHIQNTTQLFLMNLSGYTIKLPLEGIAHLYSYSNYLLVFVEP
YFNVVSNFMTSFLLNGTTVYVINTLTMKYYKLNLKELSVNVNNFYGDNDGIYAFNVASKILSTTNEEVYGYTVVIPKVEI
IINAYNLITNSTRTISFVTTGLPLSFEKDGENFTGKPYAVLNPNNNFLYIITANNNLQYIINVINLTSGGVSEFNVSFNG
EIADLTQDYLTFYNTSEVMLYNPIKNITISYPFLSPGLISISCVPSTPNLYPLITYTNKSNNTLVSTILSFTNGGKNISI
DNIPLILLCPAITVSELIDTNSLKIPFSTTPNEIKLNSVPVSINGNVVPSVSEIYIFESSVLLKTSNGYLVYNDGKLING
QVVSGVVITNSSNVNYAYENVLGVNQPIILMSTIIIGGKPYYIPGGKYIVGNIGNNVVLYGNGEISVMQVNESESGIHVN
TPELWLNIGITAFITLVLLIVVIPLIKLLRKKGGK
>Mature_515_residues
MKATLLIPLLLISFFASPQLFPSNVSYVFVTNNLIGVVYHIQNTTQLFLMNLSGYTIKLPLEGIAHLYSYSNYLLVFVEP
YFNVVSNFMTSFLLNGTTVYVINTLTMKYYKLNLKELSVNVNNFYGDNDGIYAFNVASKILSTTNEEVYGYTVVIPKVEI
IINAYNLITNSTRTISFVTTGLPLSFEKDGENFTGKPYAVLNPNNNFLYIITANNNLQYIINVINLTSGGVSEFNVSFNG
EIADLTQDYLTFYNTSEVMLYNPIKNITISYPFLSPGLISISCVPSTPNLYPLITYTNKSNNTLVSTILSFTNGGKNISI
DNIPLILLCPAITVSELIDTNSLKIPFSTTPNEIKLNSVPVSINGNVVPSVSEIYIFESSVLLKTSNGYLVYNDGKLING
QVVSGVVITNSSNVNYAYENVLGVNQPIILMSTIIIGGKPYYIPGGKYIVGNIGNNVVLYGNGEISVMQVNESESGIHVN
TPELWLNIGITAFITLVLLIVVIPLIKLLRKKGGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56710; Mature: 56710

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATLLIPLLLISFFASPQLFPSNVSYVFVTNNLIGVVYHIQNTTQLFLMNLSGYTIKLP
CCCEEHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEEECCCEEEEEEECCCCEEEEE
LEGIAHLYSYSNYLLVFVEPYFNVVSNFMTSFLLNGTTVYVINTLTMKYYKLNLKELSVN
HHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEEEEEEEEEEEE
VNNFYGDNDGIYAFNVASKILSTTNEEVYGYTVVIPKVEIIINAYNLITNSTRTISFVTT
EEEEECCCCCEEEEEHHHHHHHCCCCCEEEEEEEEEEEEEEEEEEHHHCCCCEEEEEEEE
GLPLSFEKDGENFTGKPYAVLNPNNNFLYIITANNNLQYIINVINLTSGGVSEFNVSFNG
CCCEEEECCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECC
EIADLTQDYLTFYNTSEVMLYNPIKNITISYPFLSPGLISISCVPSTPNLYPLITYTNKS
EEHHHHHHHHHEECCCCEEEECCCCCCEEEECCCCCCEEEEEEECCCCCEEEEEEEECCC
NNTLVSTILSFTNGGKNISIDNIPLILLCPAITVSELIDTNSLKIPFSTTPNEIKLNSVP
CCHHHHHHHHHCCCCCEEEECCCCEEEEECCHHHHHHHCCCCEEEEECCCCCEEEEEEEE
VSINGNVVPSVSEIYIFESSVLLKTSNGYLVYNDGKLINGQVVSGVVITNSSNVNYAYEN
EEECCCCCCCCEEEEEEECEEEEEECCCEEEECCCEEECCEEEEEEEEECCCCCCEEEHH
VLGVNQPIILMSTIIIGGKPYYIPGGKYIVGNIGNNVVLYGNGEISVMQVNESESGIHVN
CCCCCCCEEEEEEEEECCEEEEECCCCEEEEECCCEEEEEECCEEEEEEECCCCCCEEEE
TPELWLNIGITAFITLVLLIVVIPLIKLLRKKGGK
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKATLLIPLLLISFFASPQLFPSNVSYVFVTNNLIGVVYHIQNTTQLFLMNLSGYTIKLP
CCCEEHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEEECCCEEEEEEECCCCEEEEE
LEGIAHLYSYSNYLLVFVEPYFNVVSNFMTSFLLNGTTVYVINTLTMKYYKLNLKELSVN
HHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEEEEEEEEEEEE
VNNFYGDNDGIYAFNVASKILSTTNEEVYGYTVVIPKVEIIINAYNLITNSTRTISFVTT
EEEEECCCCCEEEEEHHHHHHHCCCCCEEEEEEEEEEEEEEEEEEHHHCCCCEEEEEEEE
GLPLSFEKDGENFTGKPYAVLNPNNNFLYIITANNNLQYIINVINLTSGGVSEFNVSFNG
CCCEEEECCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECC
EIADLTQDYLTFYNTSEVMLYNPIKNITISYPFLSPGLISISCVPSTPNLYPLITYTNKS
EEHHHHHHHHHEECCCCEEEECCCCCCEEEECCCCCCEEEEEEECCCCCEEEEEEEECCC
NNTLVSTILSFTNGGKNISIDNIPLILLCPAITVSELIDTNSLKIPFSTTPNEIKLNSVP
CCHHHHHHHHHCCCCCEEEECCCCEEEEECCHHHHHHHCCCCEEEEECCCCCEEEEEEEE
VSINGNVVPSVSEIYIFESSVLLKTSNGYLVYNDGKLINGQVVSGVVITNSSNVNYAYEN
EEECCCCCCCCEEEEEEECEEEEEECCCEEEECCCEEECCEEEEEEEEECCCCCCEEEHH
VLGVNQPIILMSTIIIGGKPYYIPGGKYIVGNIGNNVVLYGNGEISVMQVNESESGIHVN
CCCCCCCEEEEEEEEECCEEEEECCCCEEEEECCCEEEEEECCEEEEEEECCCCCCEEEE
TPELWLNIGITAFITLVLLIVVIPLIKLLRKKGGK
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA