| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is 15898438
Identifier: 15898438
GI number: 15898438
Start: 1466644
End: 1467852
Strand: Direct
Name: 15898438
Synonym: SSO1618
Alternate gene names: NA
Gene position: 1466644-1467852 (Clockwise)
Preceding gene: 15898437
Following gene: 15898441
Centisome position: 49.01
GC content: 32.92
Gene sequence:
>1209_bases ATGTTATCACTAGGATTAGCAGACTCAAGAGCTATAAGTAAAGCTAACAGTGGTTCGGAAAGGCATGTAAGGGAAGTTAT TAAGAGGCTTTCCTTAAGATATAAACTTTACTACTTACCTACTACTCACGCTTTTTTAGACGCAATATCTGAAGATCAGT TAAAAGAGATAAAGAAATTCGCCAAAGTTCCCTCATTTTTTGAATATTTATTGGATAAAAAATTAGGCAAAGTTTCACTA TTAAGAGAATTATTTACCTTTTCCCCTTTAGCCAAGGAGCTCGTGAGAGAGTATGAAAGGGAAATAGGTATATTAGATTT CATTTATGTTCCTCATACTTATAGAATTCAATTAATGCCATCTATTCTATTTTCAAAATTAAGCCGAGGAAAGTACGGAA TGTTATTAATGACCGATCCTCACAACTCTTTATTAGAAAAGGAGTCCTTTTTTAAATGCGTAAATGTCTGGAGCAAAATA TGGTTTTCAAGAAAGAGTGCAATCGAGTTCTGTAGTTTTCAAAGATTACAAAACATAGCATTTTTACTGAAGGCGATAAA GACAAAGCCCAGTTTTATAAGCGTAATGAACAAATGTGCTTTAAATTATACTGGTCTGCCGAAATATTTTAATACAAAAG TTCTATCTCCTCCCCACGCTTTTAACAACCTAGCCTTAAAGTACAGAAATTTTGATAAAGAGGACTACCTAGTATTTCTA GGAAGAATAAATACTGCCAAAGGAGCAAACGAAGCTCTGGAAGTAGGAAAACATGTAAAATTAAAAATGATAGGCTACAA AGAGCAGGAGTTTATAGTAAAGCAAGCAAGAAGCTTTGGAATAGAAGTAATTGAAAACGTTTCTGAAGAAGAAAAATTCG AAATACTCTCAAAGGCAAGGGCTTTAGTTCTACCTTCACACCAAGAATCTTTTTCTGTAACCATACTTGAAGCACTGGCG GTAGGGACTCCAGTAATAACTTATGATTTACCTTCTTTAACCTCTACTTATAATTTTAAGCCAGTATTTTTTGTAAAGGA ATTCGACGTTAAAGGTTTAGTAAACACTGCTTTAGAAGTATATAATATGAAAAAGATTGAAGAAATGTTTAATGATGAGA GGTTGGAGGAATTTATTAAAATGCACTCAAGTTGGGATAACGTAAGTAATGCAGTTGATAAATTAATTACTGAAGCTATT CAAGAATGA
Upstream 100 bases:
>100_bases TTACTAATGACTGCTGTAGATATTTTCTTTTACGCATTATTTATATACTTTTTCGTTTACAAGAATATTTTTAAAGGTCT AGGTACTGAGGTTTTTAGGA
Downstream 100 bases:
>100_bases CGAAATTTGTAACTAAATATATACGGATTAAAAAACATCTCATTATTAATTATAGGAAATAGATATATTTTATTACTATC TCTAGTAATGTCACCATAGA
Product: glycosyltransferase
Products: NA
Alternate protein names: LPS Biosynthesis Protein; Lipopolysaccharide N-Acetylglucosaminyltransferase; Glycosyl Transferase Group 1 Protein
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MLSLGLADSRAISKANSGSERHVREVIKRLSLRYKLYYLPTTHAFLDAISEDQLKEIKKFAKVPSFFEYLLDKKLGKVSL LRELFTFSPLAKELVREYEREIGILDFIYVPHTYRIQLMPSILFSKLSRGKYGMLLMTDPHNSLLEKESFFKCVNVWSKI WFSRKSAIEFCSFQRLQNIAFLLKAIKTKPSFISVMNKCALNYTGLPKYFNTKVLSPPHAFNNLALKYRNFDKEDYLVFL GRINTAKGANEALEVGKHVKLKMIGYKEQEFIVKQARSFGIEVIENVSEEEKFEILSKARALVLPSHQESFSVTILEALA VGTPVITYDLPSLTSTYNFKPVFFVKEFDVKGLVNTALEVYNMKKIEEMFNDERLEEFIKMHSSWDNVSNAVDKLITEAI QE
Sequences:
>Translated_402_residues MLSLGLADSRAISKANSGSERHVREVIKRLSLRYKLYYLPTTHAFLDAISEDQLKEIKKFAKVPSFFEYLLDKKLGKVSL LRELFTFSPLAKELVREYEREIGILDFIYVPHTYRIQLMPSILFSKLSRGKYGMLLMTDPHNSLLEKESFFKCVNVWSKI WFSRKSAIEFCSFQRLQNIAFLLKAIKTKPSFISVMNKCALNYTGLPKYFNTKVLSPPHAFNNLALKYRNFDKEDYLVFL GRINTAKGANEALEVGKHVKLKMIGYKEQEFIVKQARSFGIEVIENVSEEEKFEILSKARALVLPSHQESFSVTILEALA VGTPVITYDLPSLTSTYNFKPVFFVKEFDVKGLVNTALEVYNMKKIEEMFNDERLEEFIKMHSSWDNVSNAVDKLITEAI QE >Mature_402_residues MLSLGLADSRAISKANSGSERHVREVIKRLSLRYKLYYLPTTHAFLDAISEDQLKEIKKFAKVPSFFEYLLDKKLGKVSL LRELFTFSPLAKELVREYEREIGILDFIYVPHTYRIQLMPSILFSKLSRGKYGMLLMTDPHNSLLEKESFFKCVNVWSKI WFSRKSAIEFCSFQRLQNIAFLLKAIKTKPSFISVMNKCALNYTGLPKYFNTKVLSPPHAFNNLALKYRNFDKEDYLVFL GRINTAKGANEALEVGKHVKLKMIGYKEQEFIVKQARSFGIEVIENVSEEEKFEILSKARALVLPSHQESFSVTILEALA VGTPVITYDLPSLTSTYNFKPVFFVKEFDVKGLVNTALEVYNMKKIEEMFNDERLEEFIKMHSSWDNVSNAVDKLITEAI QE
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46440; Mature: 46440
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLGLADSRAISKANSGSERHVREVIKRLSLRYKLYYLPTTHAFLDAISEDQLKEIKKF CCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHCHHHHHHHHHH AKVPSFFEYLLDKKLGKVSLLRELFTFSPLAKELVREYEREIGILDFIYVPHTYRIQLMP HHCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCEEEEEEHH SILFSKLSRGKYGMLLMTDPHNSLLEKESFFKCVNVWSKIWFSRKSAIEFCSFQRLQNIA HHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLLKAIKTKPSFISVMNKCALNYTGLPKYFNTKVLSPPHAFNNLALKYRNFDKEDYLVFL HHHHHHHCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHEEEECCCCCCCEEEEE GRINTAKGANEALEVGKHVKLKMIGYKEQEFIVKQARSFGIEVIENVSEEEKFEILSKAR ECCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHH ALVLPSHQESFSVTILEALAVGTPVITYDLPSLTSTYNFKPVFFVKEFDVKGLVNTALEV HEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHH YNMKKIEEMFNDERLEEFIKMHSSWDNVSNAVDKLITEAIQE HHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLSLGLADSRAISKANSGSERHVREVIKRLSLRYKLYYLPTTHAFLDAISEDQLKEIKKF CCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHCHHHHHHHHHH AKVPSFFEYLLDKKLGKVSLLRELFTFSPLAKELVREYEREIGILDFIYVPHTYRIQLMP HHCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCEEEEEEHH SILFSKLSRGKYGMLLMTDPHNSLLEKESFFKCVNVWSKIWFSRKSAIEFCSFQRLQNIA HHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLLKAIKTKPSFISVMNKCALNYTGLPKYFNTKVLSPPHAFNNLALKYRNFDKEDYLVFL HHHHHHHCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHEEEECCCCCCCEEEEE GRINTAKGANEALEVGKHVKLKMIGYKEQEFIVKQARSFGIEVIENVSEEEKFEILSKAR ECCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHH ALVLPSHQESFSVTILEALAVGTPVITYDLPSLTSTYNFKPVFFVKEFDVKGLVNTALEV HEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHH YNMKKIEEMFNDERLEEFIKMHSSWDNVSNAVDKLITEAIQE HHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA