| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
Click here to switch to the map view.
The map label for this gene is 15898398
Identifier: 15898398
GI number: 15898398
Start: 1430039
End: 1430932
Strand: Direct
Name: 15898398
Synonym: SSO1583
Alternate gene names: NA
Gene position: 1430039-1430932 (Clockwise)
Preceding gene: 15898397
Following gene: 15898399
Centisome position: 47.79
GC content: 36.35
Gene sequence:
>894_bases ATGTCACAACAGAATACGGAATTGGAAGGAATAGGAAAATTAAGGAGCGGCTCCCTCTTTATGATACTTGCCGTGTTACT TGCCGCAATAGGAATTCTAGTAATTATATCTGCAGGTATGCTCGGTGGTATGTTTTCCGCTGCGAGCGGTAACGTTAGCG GAGTAATCGCCAGTGGTATTGGCCTTTTAGTAGGAATTGCTATAGTAATACTAATTGGCGCTATTATAGGGCTAATAGGT ATATTGAGAATAAGGAGTGGTTTCGGTATTTTGAAAAGCCTAGGTAGAGATGTAGGAATAGGTGAAATTGGAACTACCCT CTATCTAGTGGGACTAATTATTATCATTATTGGAGCATTGCTTACAATTGTATTGATAGGATTCCCAATATTGATTTTAG GAGAAATAATAGCGCTGATTGGTGGGATATTAATTGGTATAGGGTTTTACAAGGTTGGTGAAATATATAATGAGGGATTA GTTAAGATTGGTGGGATATTAATAGTAATACCCATAGATCTTATTAATTTCGTCGGCTTTATTTTGGCATATGTAGGTCT AGGTAAAGTAAGACCGTTACCAACTGTTGCACAGCAACCTTTAGTTCCCCAAGTTTATCAAGTGGGTCAAGGGACTATAA GGAATAATGGCTATGCTTATATTACATTATACTCATCAACCCCAGCTAGCATTATATCTGCGAAAATTGAGGGTGCGAAT ATTATGTCAAGTGCAATAAATCCTACTGTATTGCAAATCGGTAATAATGAGGTAACAATATTCTTTGGAAATGTTCAATC ATTAGCTCCAAATACTACTTACATTATAACACTAACGATAAACATTGGAGGGAATATAATTAACATATCTACAACAGCCG TTTATCAACCATAA
Upstream 100 bases:
>100_bases TGTGTCGATGCTTGTGACAATGTTGAAATTGTTAATGTTGTAACTATTCTGAAAAATAGAGAAAGTAAAAGTTTTTAAAT TAGTAATTAGAATATCTTAT
Downstream 100 bases:
>100_bases TTTAATAAATAAGTGGAATTTTTAATTTTTTACGTAATGAATTCCTGATACAAATCCCTTTAGCCAATCTCTTTCAATAT GATATTTGGATAAAGCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSQQNTELEGIGKLRSGSLFMILAVLLAAIGILVIISAGMLGGMFSAASGNVSGVIASGIGLLVGIAIVILIGAIIGLIG ILRIRSGFGILKSLGRDVGIGEIGTTLYLVGLIIIIIGALLTIVLIGFPILILGEIIALIGGILIGIGFYKVGEIYNEGL VKIGGILIVIPIDLINFVGFILAYVGLGKVRPLPTVAQQPLVPQVYQVGQGTIRNNGYAYITLYSSTPASIISAKIEGAN IMSSAINPTVLQIGNNEVTIFFGNVQSLAPNTTYIITLTINIGGNIINISTTAVYQP
Sequences:
>Translated_297_residues MSQQNTELEGIGKLRSGSLFMILAVLLAAIGILVIISAGMLGGMFSAASGNVSGVIASGIGLLVGIAIVILIGAIIGLIG ILRIRSGFGILKSLGRDVGIGEIGTTLYLVGLIIIIIGALLTIVLIGFPILILGEIIALIGGILIGIGFYKVGEIYNEGL VKIGGILIVIPIDLINFVGFILAYVGLGKVRPLPTVAQQPLVPQVYQVGQGTIRNNGYAYITLYSSTPASIISAKIEGAN IMSSAINPTVLQIGNNEVTIFFGNVQSLAPNTTYIITLTINIGGNIINISTTAVYQP >Mature_296_residues SQQNTELEGIGKLRSGSLFMILAVLLAAIGILVIISAGMLGGMFSAASGNVSGVIASGIGLLVGIAIVILIGAIIGLIGI LRIRSGFGILKSLGRDVGIGEIGTTLYLVGLIIIIIGALLTIVLIGFPILILGEIIALIGGILIGIGFYKVGEIYNEGLV KIGGILIVIPIDLINFVGFILAYVGLGKVRPLPTVAQQPLVPQVYQVGQGTIRNNGYAYITLYSSTPASIISAKIEGANI MSSAINPTVLQIGNNEVTIFFGNVQSLAPNTTYIITLTINIGGNIINISTTAVYQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30711; Mature: 30580
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQNTELEGIGKLRSGSLFMILAVLLAAIGILVIISAGMLGGMFSAASGNVSGVIASGI CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH GLLVGIAIVILIGAIIGLIGILRIRSGFGILKSLGRDVGIGEIGTTLYLVGLIIIIIGAL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH LTIVLIGFPILILGEIIALIGGILIGIGFYKVGEIYNEGLVKIGGILIVIPIDLINFVGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEHHHHHHHHHH ILAYVGLGKVRPLPTVAQQPLVPQVYQVGQGTIRNNGYAYITLYSSTPASIISAKIEGAN HHHHHCCCCCCCCCHHHCCCCCHHHHHCCCCEEECCCEEEEEEECCCCHHHHHHHCCCCH IMSSAINPTVLQIGNNEVTIFFGNVQSLAPNTTYIITLTINIGGNIINISTTAVYQP HHHHCCCCEEEEECCCEEEEEECCHHHCCCCCEEEEEEEEECCCEEEEEEEEEEECC >Mature Secondary Structure SQQNTELEGIGKLRSGSLFMILAVLLAAIGILVIISAGMLGGMFSAASGNVSGVIASGI CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH GLLVGIAIVILIGAIIGLIGILRIRSGFGILKSLGRDVGIGEIGTTLYLVGLIIIIIGAL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH LTIVLIGFPILILGEIIALIGGILIGIGFYKVGEIYNEGLVKIGGILIVIPIDLINFVGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEHHHHHHHHHH ILAYVGLGKVRPLPTVAQQPLVPQVYQVGQGTIRNNGYAYITLYSSTPASIISAKIEGAN HHHHHCCCCCCCCCHHHCCCCCHHHHHCCCCEEECCCEEEEEEECCCCHHHHHHHCCCCH IMSSAINPTVLQIGNNEVTIFFGNVQSLAPNTTYIITLTINIGGNIINISTTAVYQP HHHHCCCCEEEEECCCEEEEEECCHHHCCCCCEEEEEEEEECCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA