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The map label for this gene is 15898375

Identifier: 15898375

GI number: 15898375

Start: 1403746

End: 1404135

Strand: Direct

Name: 15898375

Synonym: SSO1554

Alternate gene names: NA

Gene position: 1403746-1404135 (Clockwise)

Preceding gene: 15898374

Following gene: 15898376

Centisome position: 46.91

GC content: 41.54

Gene sequence:

>390_bases
TTGAGGGATAGACTAAAGGGTGTTATTAAGAAGGGTGTTAAGGTGTTTTTCACGGATGAGTCCGGTATTCATCACGATCC
TTCCAGGAGATTGGGGTTGTATAATGTTCCCGTTGATTATCCCAGTAGGAAGCTTAATGTTCTCGCTTCTATTCCCTTGT
TTGGCGGTGTTCCTTGTTTCATGTTCACCTATTCCAATGTTAATTCCGAGATCTTTGCTGAGTTTCTTCGCTTGTTTAGG
AATTCCGGTCCTATTGTGTTGATCCTTGATAATGCTAAGTTTCACAAGAATGCTTATGTTTTCTCCGTTGCTTCTCAGCT
CGGCATTATCTTGCTTTTCTTGCCTCCGTATTCTCCGGATTTAAACCCTATTGAGTTTGGAAGGACTTGA

Upstream 100 bases:

>100_bases
CACGTTAAATTAAGCTACGTAACAGCTTGGAGAATAGCTAGGAAAAGATTGAAAATCCCCTACATATAACAAGAAGAGGC
CCTTTAACGCAGATAACATC

Downstream 100 bases:

>100_bases
AGCGTTGGGTTAATACTTATTATAATCTTGAATACACTCTTGATTCGATGGAGGAGGAGTTCTATTATTTGTTTTTGACG
CGTGATTATACAAGCTATTG

Product: second ORF in transposon ISC1395

Products: NA

Alternate protein names: Transposase ISC; Resolvase Helix-Turn-Helix Domain Protein; ORF2 In Transposon ISC

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MRDRLKGVIKKGVKVFFTDESGIHHDPSRRLGLYNVPVDYPSRKLNVLASIPLFGGVPCFMFTYSNVNSEIFAEFLRLFR
NSGPIVLILDNAKFHKNAYVFSVASQLGIILLFLPPYSPDLNPIEFGRT

Sequences:

>Translated_129_residues
MRDRLKGVIKKGVKVFFTDESGIHHDPSRRLGLYNVPVDYPSRKLNVLASIPLFGGVPCFMFTYSNVNSEIFAEFLRLFR
NSGPIVLILDNAKFHKNAYVFSVASQLGIILLFLPPYSPDLNPIEFGRT
>Mature_129_residues
MRDRLKGVIKKGVKVFFTDESGIHHDPSRRLGLYNVPVDYPSRKLNVLASIPLFGGVPCFMFTYSNVNSEIFAEFLRLFR
NSGPIVLILDNAKFHKNAYVFSVASQLGIILLFLPPYSPDLNPIEFGRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14592; Mature: 14592

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDRLKGVIKKGVKVFFTDESGIHHDPSRRLGLYNVPVDYPSRKLNVLASIPLFGGVPCF
CCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCEE
MFTYSNVNSEIFAEFLRLFRNSGPIVLILDNAKFHKNAYVFSVASQLGIILLFLPPYSPD
EEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEHHHHCEEEEEECCCCCC
LNPIEFGRT
CCCCCCCCC
>Mature Secondary Structure
MRDRLKGVIKKGVKVFFTDESGIHHDPSRRLGLYNVPVDYPSRKLNVLASIPLFGGVPCF
CCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCEE
MFTYSNVNSEIFAEFLRLFRNSGPIVLILDNAKFHKNAYVFSVASQLGIILLFLPPYSPD
EEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEHHHHCEEEEEECCCCCC
LNPIEFGRT
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA