Click here to switch to the map view.

The map label for this gene is 15898369

Identifier: 15898369

GI number: 15898369

Start: 1397547

End: 1398416

Strand: Direct

Name: 15898369

Synonym: SSO1546

Alternate gene names: NA

Gene position: 1397547-1398416 (Clockwise)

Preceding gene: 15898367

Following gene: 15898370

Centisome position: 46.71

GC content: 48.62

Gene sequence:

>870_bases
ATGCAAGTTTATGAAACGGGATTCAAAACGGAGTTGAAGTCCCTCGCTAGTTATTTCATCGTCAATAATCTTAACGTTAT
CTCCCAAGAGTTGGACACGAGGATCGCGGACGCAGCTCCGTTCCTGTTGACAGGGAACAGGGAAAAGGAGTACTTGAAGG
TCGTTAGGGAAGGAGAGAAGGTGATGAGTCAAGGGGAGAGGAGCTTCAAGTTCTACCCTCACGTGAAAGTTGAGGGAAAG
ACTACAATCGTTGCAGTGGACGAGACCGCGATAACCGTGGGAGAGAAGGAGTCGAGGAAGGTGGAAGGATTTCAACTCTA
CAACGGGAAGAGGAAGGGAGTTAAGTTGAGGTCCGTGGACTTGGTGTTCCCCTTGAGGTTGTCCCTCCTCGAGGAGATAG
CTGACTTGAGAAGCGATACTCCCTCCCAGTTCCTGATGAGGGCCGTGAGCGAAGTTGCTCAGCACCTCAAGATAGACTAC
GTTGTTGCTGACGCGGGTTTCCTGAACTTGAAGGTAATCAAGGAGATGCCTGTGAAGACCGTGGTAGGAGGTAAGACCAA
CCTGAAGGGCTTCAAGGAACTCTCCAACGTCTCTCTAACCGAGAAGAAATGCGAGGTAAATGACAGGGTTTACGTTGCGT
ATAGGGTCCTGAAGTACAATGACCTTTACTACTATGAAGTGATATACGTCAAGGAGAAACCCAGGCACTTCATCTTCGTT
ACCAACTTCAATGGAGATCCCTACAAGCTAGCTGAGCTCTACAGGTTGAGATGGCAGAGCGAAGAGGGCTTCAAGGTCAG
GAAGGCCAGGATAAGATACGTTAGTGCTTTCAGAAAGTTTATGGCTTATAGGCAAAGGATATACCACTAG

Upstream 100 bases:

>100_bases
GAGGGTAATATCATCTGTTTAGCATTATCAAGCGGGGAGGGGAGGTCTAGGGAGGAGGTGAACAGGAAAGGGTTAAAGCG
AGGGACTCCATGACTCCGTT

Downstream 100 bases:

>100_bases
ATCATAGTCTAAGAACTTTTCCAAAATACTAACGAATATAGGTGTGACACAAGGGTAGGGGTAATTGGAATAGACGTATC
AAAAGAACACTTGGTAACAA

Product: partial transposase ISC1439

Products: NA

Alternate protein names: Transposon

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MQVYETGFKTELKSLASYFIVNNLNVISQELDTRIADAAPFLLTGNREKEYLKVVREGEKVMSQGERSFKFYPHVKVEGK
TTIVAVDETAITVGEKESRKVEGFQLYNGKRKGVKLRSVDLVFPLRLSLLEEIADLRSDTPSQFLMRAVSEVAQHLKIDY
VVADAGFLNLKVIKEMPVKTVVGGKTNLKGFKELSNVSLTEKKCEVNDRVYVAYRVLKYNDLYYYEVIYVKEKPRHFIFV
TNFNGDPYKLAELYRLRWQSEEGFKVRKARIRYVSAFRKFMAYRQRIYH

Sequences:

>Translated_289_residues
MQVYETGFKTELKSLASYFIVNNLNVISQELDTRIADAAPFLLTGNREKEYLKVVREGEKVMSQGERSFKFYPHVKVEGK
TTIVAVDETAITVGEKESRKVEGFQLYNGKRKGVKLRSVDLVFPLRLSLLEEIADLRSDTPSQFLMRAVSEVAQHLKIDY
VVADAGFLNLKVIKEMPVKTVVGGKTNLKGFKELSNVSLTEKKCEVNDRVYVAYRVLKYNDLYYYEVIYVKEKPRHFIFV
TNFNGDPYKLAELYRLRWQSEEGFKVRKARIRYVSAFRKFMAYRQRIYH
>Mature_289_residues
MQVYETGFKTELKSLASYFIVNNLNVISQELDTRIADAAPFLLTGNREKEYLKVVREGEKVMSQGERSFKFYPHVKVEGK
TTIVAVDETAITVGEKESRKVEGFQLYNGKRKGVKLRSVDLVFPLRLSLLEEIADLRSDTPSQFLMRAVSEVAQHLKIDY
VVADAGFLNLKVIKEMPVKTVVGGKTNLKGFKELSNVSLTEKKCEVNDRVYVAYRVLKYNDLYYYEVIYVKEKPRHFIFV
TNFNGDPYKLAELYRLRWQSEEGFKVRKARIRYVSAFRKFMAYRQRIYH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33667; Mature: 33667

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVYETGFKTELKSLASYFIVNNLNVISQELDTRIADAAPFLLTGNREKEYLKVVREGEK
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH
VMSQGERSFKFYPHVKVEGKTTIVAVDETAITVGEKESRKVEGFQLYNGKRKGVKLRSVD
HHHCCCCCEEECCEEEECCCEEEEEECCEEEEECCCCCCCCCCEEEECCCCCCEEEEEEE
LVFPLRLSLLEEIADLRSDTPSQFLMRAVSEVAQHLKIDYVVADAGFLNLKVIKEMPVKT
EEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEHHHCCCEE
VVGGKTNLKGFKELSNVSLTEKKCEVNDRVYVAYRVLKYNDLYYYEVIYVKEKPRHFIFV
EECCCCCCHHHHHHHCCCCCHHHCCCCCEEEEEEEEEEECCEEEEEEEEEEECCCEEEEE
TNFNGDPYKLAELYRLRWQSEEGFKVRKARIRYVSAFRKFMAYRQRIYH
ECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQVYETGFKTELKSLASYFIVNNLNVISQELDTRIADAAPFLLTGNREKEYLKVVREGEK
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH
VMSQGERSFKFYPHVKVEGKTTIVAVDETAITVGEKESRKVEGFQLYNGKRKGVKLRSVD
HHHCCCCCEEECCEEEECCCEEEEEECCEEEEECCCCCCCCCCEEEECCCCCCEEEEEEE
LVFPLRLSLLEEIADLRSDTPSQFLMRAVSEVAQHLKIDYVVADAGFLNLKVIKEMPVKT
EEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEHHHCCCEE
VVGGKTNLKGFKELSNVSLTEKKCEVNDRVYVAYRVLKYNDLYYYEVIYVKEKPRHFIFV
EECCCCCCHHHHHHHCCCCCHHHCCCCCEEEEEEEEEEECCEEEEEEEEEEECCCEEEEE
TNFNGDPYKLAELYRLRWQSEEGFKVRKARIRYVSAFRKFMAYRQRIYH
ECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA