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The map label for this gene is 15898347

Identifier: 15898347

GI number: 15898347

Start: 1373305

End: 1373658

Strand: Direct

Name: 15898347

Synonym: SSO1520

Alternate gene names: NA

Gene position: 1373305-1373658 (Clockwise)

Preceding gene: 15898342

Following gene: 15898348

Centisome position: 45.9

GC content: 32.2

Gene sequence:

>354_bases
GTGCCTTTCATGTGGAGCAAGCATTACAATTATATGTTAAAGCTTGTGATCTTTGAACTTTTCGGAAAGGAGTATGAAGG
ACATGGAATAAGAGAATTGATAAGCTATTTATCAAAGCTACTTAAGGAAAGCGAATATGAAGATTTAGCCAAAAAGATTA
ACGAATTAATTGGAGAATATAGGCAACAGTTGATAGCTATTGAGGATGCTTATATAGATTCTGGGTATGAGAATATCGAA
TATGAAAGTGAGGATTTAAAACACTTAATTGAAGTCACAGAAATTATAGTAAAATTCTTGGAGAAGGTGATAAAGATTGT
CAAGCTGGGTTTAAGTTCAGATTTTCGCATTTAA

Upstream 100 bases:

>100_bases
ATACTTGTGAGTGGAAATAGGGTTAGATTACTTAAAAAGAGAGCGTTACGCTTTTTAGATGAAGCAAAAAGAGATCTTAA
CGAAGGGTATTATGATATAG

Downstream 100 bases:

>100_bases
GGGGTAGATTCTCTAGAGTGTATAAACCCACAGTGTGGTTAACACCAAAGCTAAGTTACTCAATAAACTTTGAAAGAATG
ACTGTTAGGATTGCAAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: HEPN Domain Protein

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MPFMWSKHYNYMLKLVIFELFGKEYEGHGIRELISYLSKLLKESEYEDLAKKINELIGEYRQQLIAIEDAYIDSGYENIE
YESEDLKHLIEVTEIIVKFLEKVIKIVKLGLSSDFRI

Sequences:

>Translated_117_residues
MPFMWSKHYNYMLKLVIFELFGKEYEGHGIRELISYLSKLLKESEYEDLAKKINELIGEYRQQLIAIEDAYIDSGYENIE
YESEDLKHLIEVTEIIVKFLEKVIKIVKLGLSSDFRI
>Mature_116_residues
PFMWSKHYNYMLKLVIFELFGKEYEGHGIRELISYLSKLLKESEYEDLAKKINELIGEYRQQLIAIEDAYIDSGYENIEY
ESEDLKHLIEVTEIIVKFLEKVIKIVKLGLSSDFRI

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13930; Mature: 13799

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFMWSKHYNYMLKLVIFELFGKEYEGHGIRELISYLSKLLKESEYEDLAKKINELIGEY
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RQQLIAIEDAYIDSGYENIEYESEDLKHLIEVTEIIVKFLEKVIKIVKLGLSSDFRI
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PFMWSKHYNYMLKLVIFELFGKEYEGHGIRELISYLSKLLKESEYEDLAKKINELIGEY
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RQQLIAIEDAYIDSGYENIEYESEDLKHLIEVTEIIVKFLEKVIKIVKLGLSSDFRI
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA