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The map label for this gene is 15898340

Identifier: 15898340

GI number: 15898340

Start: 1366799

End: 1367608

Strand: Reverse

Name: 15898340

Synonym: SSO1514

Alternate gene names: NA

Gene position: 1367608-1366799 (Counterclockwise)

Preceding gene: 15898341

Following gene: 15898339

Centisome position: 45.71

GC content: 34.57

Gene sequence:

>810_bases
GTGGTTCCTAAATATCTAGTATTGGCGTATGCAATAACACCCATACACGTAGGTGCAGGGAAATCCTCTACTGGGGTAGT
TGATTCGCCCCTTGTAAGAGACTCTATCGGTTATCCCATAGTTTACGGCTCAAGTCTTAAAGGCTCATTAAAGTCGTTCT
TAATAGCGAAAAATGAAAGTTTAGCAAAATGCGTTTTCGGCGGAAAGCCAGAGGAGGAAAATATTTTAACGAGTAAATAC
GTACTCACTGACCTCATTCCAGTATTTTATCCCGTTTCAAGTATTGATGAAGGATACATTTATATTACCACCAGATATTT
AATAAATCATATCGAAGATTTGATGAGTAGACTGGGTATAGGCAGTTTATACAAAGAAAGTAAGGAGAAGAGCGAGGTAA
GGATATTTCTGGGCAAAATCAGTACTGAATTATCTCTTCAGTTAAGTGATGAGGTGAGATCTTTAGGTAATTTAATCAAA
GATAAAAATAGAGTCTACGTTTTAGATAATAGTATAGGATTATCGGCCGTCGAATCCGCTTTAACAAGAGTTACTAGAAC
TGAATTAGATGATAATACGAAGACTTCGAAAAACATATGGTCTGAGGAATATATACCTCAAGGTACGATATTGCTTAGCG
GGATATTCGAAAGAGAAATAAGTAATAGTTATTGTGAGGAATTAAATAGAAATAATGTTAATATAGACAATGAATTCTTA
AAATTGATTGATAATGTTTCAGTATTTATAGGTGGTAAGGAGAGCATAGGTAAGGGATTAACTAAGATTAAATTAAAAAG
GGTGAGTTAG

Upstream 100 bases:

>100_bases
AGTTGAGGCTTTAGAGATATTCTTGTCCTTCACACTACATGAAAGTACAATCAGCTATTGAAACTATATATTTATAAGCT
ATCTTCAGATTAGATAAAAT

Downstream 100 bases:

>100_bases
GTTTGGAATCAGAATACGTTAAATTCGCTACAGAGATAGGTAAGAGAATAGTTTCAGCCCAATGTAAAATACAATCCGGG
CCTTCTAAACCCGGATTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Cmr4 Family Protein Family Protein; RAMP Superfamily DNA Repair Protein

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MVPKYLVLAYAITPIHVGAGKSSTGVVDSPLVRDSIGYPIVYGSSLKGSLKSFLIAKNESLAKCVFGGKPEEENILTSKY
VLTDLIPVFYPVSSIDEGYIYITTRYLINHIEDLMSRLGIGSLYKESKEKSEVRIFLGKISTELSLQLSDEVRSLGNLIK
DKNRVYVLDNSIGLSAVESALTRVTRTELDDNTKTSKNIWSEEYIPQGTILLSGIFEREISNSYCEELNRNNVNIDNEFL
KLIDNVSVFIGGKESIGKGLTKIKLKRVS

Sequences:

>Translated_269_residues
MVPKYLVLAYAITPIHVGAGKSSTGVVDSPLVRDSIGYPIVYGSSLKGSLKSFLIAKNESLAKCVFGGKPEEENILTSKY
VLTDLIPVFYPVSSIDEGYIYITTRYLINHIEDLMSRLGIGSLYKESKEKSEVRIFLGKISTELSLQLSDEVRSLGNLIK
DKNRVYVLDNSIGLSAVESALTRVTRTELDDNTKTSKNIWSEEYIPQGTILLSGIFEREISNSYCEELNRNNVNIDNEFL
KLIDNVSVFIGGKESIGKGLTKIKLKRVS
>Mature_269_residues
MVPKYLVLAYAITPIHVGAGKSSTGVVDSPLVRDSIGYPIVYGSSLKGSLKSFLIAKNESLAKCVFGGKPEEENILTSKY
VLTDLIPVFYPVSSIDEGYIYITTRYLINHIEDLMSRLGIGSLYKESKEKSEVRIFLGKISTELSLQLSDEVRSLGNLIK
DKNRVYVLDNSIGLSAVESALTRVTRTELDDNTKTSKNIWSEEYIPQGTILLSGIFEREISNSYCEELNRNNVNIDNEFL
KLIDNVSVFIGGKESIGKGLTKIKLKRVS

Specific function: Unknown

COG id: COG1336

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29873; Mature: 29873

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPKYLVLAYAITPIHVGAGKSSTGVVDSPLVRDSIGYPIVYGSSLKGSLKSFLIAKNES
CCCHHEEEEEEEEEEEECCCCCCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHCCCCC
LAKCVFGGKPEEENILTSKYVLTDLIPVFYPVSSIDEGYIYITTRYLINHIEDLMSRLGI
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCC
GSLYKESKEKSEVRIFLGKISTELSLQLSDEVRSLGNLIKDKNRVYVLDNSIGLSAVESA
CHHHHHHHCCCCEEEEEEECCCEEEEEEHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH
LTRVTRTELDDNTKTSKNIWSEEYIPQGTILLSGIFEREISNSYCEELNRNNVNIDNEFL
HHHHHHHHCCCCCCHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
KLIDNVSVFIGGKESIGKGLTKIKLKRVS
HHHCCCEEEECCHHHHHCCCEEEEEEECC
>Mature Secondary Structure
MVPKYLVLAYAITPIHVGAGKSSTGVVDSPLVRDSIGYPIVYGSSLKGSLKSFLIAKNES
CCCHHEEEEEEEEEEEECCCCCCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHCCCCC
LAKCVFGGKPEEENILTSKYVLTDLIPVFYPVSSIDEGYIYITTRYLINHIEDLMSRLGI
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCC
GSLYKESKEKSEVRIFLGKISTELSLQLSDEVRSLGNLIKDKNRVYVLDNSIGLSAVESA
CHHHHHHHCCCCEEEEEEECCCEEEEEEHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH
LTRVTRTELDDNTKTSKNIWSEEYIPQGTILLSGIFEREISNSYCEELNRNNVNIDNEFL
HHHHHHHHCCCCCCHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
KLIDNVSVFIGGKESIGKGLTKIKLKRVS
HHHCCCEEEECCHHHHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA