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The map label for this gene is 15898337

Identifier: 15898337

GI number: 15898337

Start: 1364187

End: 1364927

Strand: Reverse

Name: 15898337

Synonym: SSO1510

Alternate gene names: NA

Gene position: 1364927-1364187 (Counterclockwise)

Preceding gene: 15898338

Following gene: 15898336

Centisome position: 45.62

GC content: 33.33

Gene sequence:

>741_bases
GTGTCGATAATTATGGAAAGACAAAGAGGTAATCAGTTACTTAGAATAATATCTGAATATATGACTAATCTTAAAGAAAA
AGGACAGAAGTTAGCGAAAGACAATACAATGGAGAATTTAGTAAATTTCACACCACGATACAATCTTATAAAATCTTACC
TCGATGATGTGGAAAGAGCTTTAGATAGATCGGGATTGTGTTATGTGAAAATTACCTTTATAACTCTAAGTAAATTGCTA
ACGGGTTGGAGTCCAATATATTTCATAACAGAAGTTCCACTAGCATGGGATATGATACTAGATACTCCTTATATTGCCGG
ATCCGAAATAAAGGGGATTGTGAAGAATTATTTTAAAGAAGTAACCAGTAACGATAAAGTAGAATCTTGTTTATACGGTG
ATGAAGGAAAGATGGGAAAGGTGATTTTCTTCAACGCATACCCCATAGATGGTAAGAACGTCTTAACGTATGATATAATA
ACTCCGCATTATAATGGAGCTAAAGACGAATACAATGTTAAACCAATTCCTATAAAGTTCTTAGCTATAAATAAGGGTAT
TACGTTCAAGACGTATTTAGCTTTCGATAATAAAGAGTTGAATGAGTGTGGAAAGGATTCCTTATATTTATTACTTAAGA
CTATGATTTTTTCAATGAGAATAGGCTGGGGGAGAAAAGTAACTAGAGGATATGGAAGTTTAGATATAAAGGAGATGGAC
GTGAAGTGTCATGGTGAGTGA

Upstream 100 bases:

>100_bases
AAGAGCTTGCTATAAATAACAAGGATCTATCCTTCCCAGATAATGTGAGCAAATTGATTCAAGTTTATACTACTGCATTA
AAGGATAATATAATGAAAGA

Downstream 100 bases:

>100_bases
GAAACCACCAATAAACTTTTTAGAAAATCGTTACATTCTTACGGTGAACTACCCCGTCCTAACGGTAGACCCAAAATCAT
TTTACAAAAAATAATTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Cmr6 Family Protein; Cmr6 Family CRISPR-Associated RAMP Protein

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSIIMERQRGNQLLRIISEYMTNLKEKGQKLAKDNTMENLVNFTPRYNLIKSYLDDVERALDRSGLCYVKITFITLSKLL
TGWSPIYFITEVPLAWDMILDTPYIAGSEIKGIVKNYFKEVTSNDKVESCLYGDEGKMGKVIFFNAYPIDGKNVLTYDII
TPHYNGAKDEYNVKPIPIKFLAINKGITFKTYLAFDNKELNECGKDSLYLLLKTMIFSMRIGWGRKVTRGYGSLDIKEMD
VKCHGE

Sequences:

>Translated_246_residues
MSIIMERQRGNQLLRIISEYMTNLKEKGQKLAKDNTMENLVNFTPRYNLIKSYLDDVERALDRSGLCYVKITFITLSKLL
TGWSPIYFITEVPLAWDMILDTPYIAGSEIKGIVKNYFKEVTSNDKVESCLYGDEGKMGKVIFFNAYPIDGKNVLTYDII
TPHYNGAKDEYNVKPIPIKFLAINKGITFKTYLAFDNKELNECGKDSLYLLLKTMIFSMRIGWGRKVTRGYGSLDIKEMD
VKCHGE
>Mature_245_residues
SIIMERQRGNQLLRIISEYMTNLKEKGQKLAKDNTMENLVNFTPRYNLIKSYLDDVERALDRSGLCYVKITFITLSKLLT
GWSPIYFITEVPLAWDMILDTPYIAGSEIKGIVKNYFKEVTSNDKVESCLYGDEGKMGKVIFFNAYPIDGKNVLTYDIIT
PHYNGAKDEYNVKPIPIKFLAINKGITFKTYLAFDNKELNECGKDSLYLLLKTMIFSMRIGWGRKVTRGYGSLDIKEMDV
KCHGE

Specific function: Unknown

COG id: COG1604

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28288; Mature: 28157

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIMERQRGNQLLRIISEYMTNLKEKGQKLAKDNTMENLVNFTPRYNLIKSYLDDVERA
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHH
LDRSGLCYVKITFITLSKLLTGWSPIYFITEVPLAWDMILDTPYIAGSEIKGIVKNYFKE
HCCCCEEEEEEHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHH
VTSNDKVESCLYGDEGKMGKVIFFNAYPIDGKNVLTYDIITPHYNGAKDEYNVKPIPIKF
HCCCCCHHHHEECCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEE
LAINKGITFKTYLAFDNKELNECGKDSLYLLLKTMIFSMRIGWGRKVTRGYGSLDIKEMD
EEECCCCEEEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEC
VKCHGE
EEECCC
>Mature Secondary Structure 
SIIMERQRGNQLLRIISEYMTNLKEKGQKLAKDNTMENLVNFTPRYNLIKSYLDDVERA
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHH
LDRSGLCYVKITFITLSKLLTGWSPIYFITEVPLAWDMILDTPYIAGSEIKGIVKNYFKE
HCCCCEEEEEEHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHH
VTSNDKVESCLYGDEGKMGKVIFFNAYPIDGKNVLTYDIITPHYNGAKDEYNVKPIPIKF
HCCCCCHHHHEECCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEE
LAINKGITFKTYLAFDNKELNECGKDSLYLLLKTMIFSMRIGWGRKVTRGYGSLDIKEMD
EEECCCCEEEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEC
VKCHGE
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA