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The map label for this gene is 15898321

Identifier: 15898321

GI number: 15898321

Start: 1345827

End: 1346141

Strand: Direct

Name: 15898321

Synonym: SSO1490

Alternate gene names: NA

Gene position: 1345827-1346141 (Clockwise)

Preceding gene: 15898320

Following gene: 15898325

Centisome position: 44.98

GC content: 37.78

Gene sequence:

>315_bases
TTGAGGTACTTTAAGAGGCGTGTGGGTAGTGGTAGGGTTTACATGGTCATGGATAATTACTCTCCTCACAAGACTAAGGG
TACGCTTGAGGTTTGTTGCAGGAAGGGTATTCATCCCGTGTTTACTCCTCCTTACTCGCCTGAGCTTAATATGGCTGAGG
CGGTCTTCAAGTCCCTCAAGAACTACATGAGCAATAAAATATTCTATACGATAGAAGACGTTAAAAACTGTATTAAACAG
TTCTTTGAAGAAAATAAGTATAGATTTAATCTTAATGCAATAACATACTTAGGATTAGATAAAATTGAGGTCTAA

Upstream 100 bases:

>100_bases
TTTCTCATCTAACCAGGAAAGATTCGTTATATATTTTTAACGTAACGTAAAAGTGTAACGATTTTCCTATAAATGCTACT
CTGAATCTGTTAAGTATTTC

Downstream 100 bases:

>100_bases
GAACTTTCTGGAAATACTAGTGGAGGAGCTCCTCAGATTCGTTGAAAATCATTTAGGTGGTGCACCGGATCTGATGAAAA
TGTTTAAGCTACGTTAAAGT

Product: partial transposase from ISC1048

Products: NA

Alternate protein names: Transposase ISC; ORF2 In Transposon ISC

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MRYFKRRVGSGRVYMVMDNYSPHKTKGTLEVCCRKGIHPVFTPPYSPELNMAEAVFKSLKNYMSNKIFYTIEDVKNCIKQ
FFEENKYRFNLNAITYLGLDKIEV

Sequences:

>Translated_104_residues
MRYFKRRVGSGRVYMVMDNYSPHKTKGTLEVCCRKGIHPVFTPPYSPELNMAEAVFKSLKNYMSNKIFYTIEDVKNCIKQ
FFEENKYRFNLNAITYLGLDKIEV
>Mature_104_residues
MRYFKRRVGSGRVYMVMDNYSPHKTKGTLEVCCRKGIHPVFTPPYSPELNMAEAVFKSLKNYMSNKIFYTIEDVKNCIKQ
FFEENKYRFNLNAITYLGLDKIEV

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12307; Mature: 12307

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYFKRRVGSGRVYMVMDNYSPHKTKGTLEVCCRKGIHPVFTPPYSPELNMAEAVFKSLK
CCHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
NYMSNKIFYTIEDVKNCIKQFFEENKYRFNLNAITYLGLDKIEV
HHHCCCEEEEHHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCC
>Mature Secondary Structure
MRYFKRRVGSGRVYMVMDNYSPHKTKGTLEVCCRKGIHPVFTPPYSPELNMAEAVFKSLK
CCHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
NYMSNKIFYTIEDVKNCIKQFFEENKYRFNLNAITYLGLDKIEV
HHHCCCEEEEHHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA