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The map label for this gene is 15898274

Identifier: 15898274

GI number: 15898274

Start: 1288534

End: 1289445

Strand: Reverse

Name: 15898274

Synonym: SSO1436

Alternate gene names: NA

Gene position: 1289445-1288534 (Counterclockwise)

Preceding gene: 15898275

Following gene: 15898273

Centisome position: 43.09

GC content: 42.65

Gene sequence:

>912_bases
GTGAGGGTTACCAATATGGATCTTGTAACCCTCGCACAATTAATACTTATGATTCTAAGAAATTTAAATCTTAAGCCGAG
AAAGTACGAGCTAAAGGATATTGCATTAGCATTAGCAGCCTACTCCTTGGGAGTTCAAATCACGAAAACGGGAATCCCAC
CATCAACCCTATACTACTACTTGAGGAAAGTAGGGATAAGGAGGAGAGGAGAAAGCAGACCAACATGCCCATCATGTAAC
TCTAACAGAGTAGTGAAGAACGGTTCATCTAGAGGGAGAGCAAAATACAAGTGTAAAGCGTGTGGAAGGACGTTTTACGA
CGCGTTAAAGCACAGAATGGATAGGGAACAGAGGGAGAGAATCTTAAAGGAGTACTTGAACAGGATGAGCATGAGGGCAA
TATCAAGAGTTGAAGGTAAACCATTGACTACTGTTTACAGCCTAGTGAGGAGGATTGGGATAAGGGCCTTCACGTATCTA
ACGATCTTGAAGGGTGAGCTCAAGAATTTCACAGCTAAGTCTACGGTGTTTGACGAGTTCTGGACTTATTTCCGTGTTAG
GCATGGGGTGATGAGGGAGGATTTGTGGATTTGGACTGCTCTTGCTGATGGTGTGCCTTTCTATGAGTTTGGGGATAGGA
GTTATGGGACTTTTCGTTATCTCTTGGGTTGGTTACCTAGGAGTGAGGTAAACTATACTGACTACTACTGTGTTTATCAA
GTTCTCGATAATCGTGTAGCGAGTAAGAAGTATACTTATCTTGTGGAGAGTCATAATTCTTGGTGTAGGTCTCATTTGGC
GAGGCTGGCTAGGGATACTAAAGCTGTTACTAGGAGTGGGAGGATGGTGGAGTACAGTTTGGCCTTGTTAAATGTAATGT
ATCCTCACGTATTTTCAAAGGAGATAACTTAA

Upstream 100 bases:

>100_bases
AATTTCCACAATTAGTCGTTTCGATCGAGATGCAGCCAATGAATTAGAACATGAAAACAGCCTCTGAAAAAGCTTATGTG
CGAGGGTTACGAGATTTTTT

Downstream 100 bases:

>100_bases
ATGAGGCTTACTTGAAGGGAGTACGGTATATTATAGAAAACTTGATATAATTTTACTAACAATTGTCGAATAAGATGACT
GCATGAGAACACTCCCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: IS1 Transposase; Transposon; Second ORF In Transposon ISC; Transposase ISC; Partial Transposase ISC; Partial Transposase In ISC

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MRVTNMDLVTLAQLILMILRNLNLKPRKYELKDIALALAAYSLGVQITKTGIPPSTLYYYLRKVGIRRRGESRPTCPSCN
SNRVVKNGSSRGRAKYKCKACGRTFYDALKHRMDREQRERILKEYLNRMSMRAISRVEGKPLTTVYSLVRRIGIRAFTYL
TILKGELKNFTAKSTVFDEFWTYFRVRHGVMREDLWIWTALADGVPFYEFGDRSYGTFRYLLGWLPRSEVNYTDYYCVYQ
VLDNRVASKKYTYLVESHNSWCRSHLARLARDTKAVTRSGRMVEYSLALLNVMYPHVFSKEIT

Sequences:

>Translated_303_residues
MRVTNMDLVTLAQLILMILRNLNLKPRKYELKDIALALAAYSLGVQITKTGIPPSTLYYYLRKVGIRRRGESRPTCPSCN
SNRVVKNGSSRGRAKYKCKACGRTFYDALKHRMDREQRERILKEYLNRMSMRAISRVEGKPLTTVYSLVRRIGIRAFTYL
TILKGELKNFTAKSTVFDEFWTYFRVRHGVMREDLWIWTALADGVPFYEFGDRSYGTFRYLLGWLPRSEVNYTDYYCVYQ
VLDNRVASKKYTYLVESHNSWCRSHLARLARDTKAVTRSGRMVEYSLALLNVMYPHVFSKEIT
>Mature_303_residues
MRVTNMDLVTLAQLILMILRNLNLKPRKYELKDIALALAAYSLGVQITKTGIPPSTLYYYLRKVGIRRRGESRPTCPSCN
SNRVVKNGSSRGRAKYKCKACGRTFYDALKHRMDREQRERILKEYLNRMSMRAISRVEGKPLTTVYSLVRRIGIRAFTYL
TILKGELKNFTAKSTVFDEFWTYFRVRHGVMREDLWIWTALADGVPFYEFGDRSYGTFRYLLGWLPRSEVNYTDYYCVYQ
VLDNRVASKKYTYLVESHNSWCRSHLARLARDTKAVTRSGRMVEYSLALLNVMYPHVFSKEIT

Specific function: Unknown

COG id: COG3677

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35515; Mature: 35515

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTNMDLVTLAQLILMILRNLNLKPRKYELKDIALALAAYSLGVQITKTGIPPSTLYYY
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHH
LRKVGIRRRGESRPTCPSCNSNRVVKNGSSRGRAKYKCKACGRTFYDALKHRMDREQRER
HHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHH
ILKEYLNRMSMRAISRVEGKPLTTVYSLVRRIGIRAFTYLTILKGELKNFTAKSTVFDEF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WTYFRVRHGVMREDLWIWTALADGVPFYEFGDRSYGTFRYLLGWLPRSEVNYTDYYCVYQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHH
VLDNRVASKKYTYLVESHNSWCRSHLARLARDTKAVTRSGRMVEYSLALLNVMYPHVFSK
HHHHHHHCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
EIT
CCC
>Mature Secondary Structure
MRVTNMDLVTLAQLILMILRNLNLKPRKYELKDIALALAAYSLGVQITKTGIPPSTLYYY
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHH
LRKVGIRRRGESRPTCPSCNSNRVVKNGSSRGRAKYKCKACGRTFYDALKHRMDREQRER
HHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHH
ILKEYLNRMSMRAISRVEGKPLTTVYSLVRRIGIRAFTYLTILKGELKNFTAKSTVFDEF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WTYFRVRHGVMREDLWIWTALADGVPFYEFGDRSYGTFRYLLGWLPRSEVNYTDYYCVYQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHH
VLDNRVASKKYTYLVESHNSWCRSHLARLARDTKAVTRSGRMVEYSLALLNVMYPHVFSK
HHHHHHHCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
EIT
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA