Click here to switch to the map view.

The map label for this gene is 15898261

Identifier: 15898261

GI number: 15898261

Start: 1276502

End: 1277293

Strand: Direct

Name: 15898261

Synonym: SSO1422

Alternate gene names: NA

Gene position: 1276502-1277293 (Clockwise)

Preceding gene: 15898260

Following gene: 15898262

Centisome position: 42.66

GC content: 39.27

Gene sequence:

>792_bases
ATGCAGAATACAAAATGCGTGATTTCGGATATAACTCAGCACTCATATACTTTCTCAGGGAGATTTGATATGATAGTTGC
GGAAATTTTCGTTAAACCTGAGAGCGACGCTATCATACCGTTTAGTAGTAAAGTGGGGAAGAGTTTGCTTTTGGATCCTA
AGAACGTTTCAATATCTCCTCTAAAATACAAGGGCAAATACTTGATAAAGTACGGATCAGTTTTAACTTTTCTGGAGGTT
ATTGGGGGTAATGTTTACTCTTTTGAGGTAGGTGGGGATGAGAGGAATGTGTACTCTGCTCTAATTAATTTGGGTGATAA
GAGTTTATTATTCAATACTTATTGGAAAGTTGTCGACGTTGAGGTTCATGAAGTTGAGGTTAGTTCGATACCGAAGAACT
TTGGGGTTGATATTTTAACACCGGCTTTGATAGTCTCTCCCTATGTGAAGGAAAAGAGGAAGGTGTTCACTAATAAGTCT
GAGTACGTTTTCTTCAATAACATTATTGACGCTACCGGGTTCAATAGAGGTGATGTAAAGTTAAGTGAGGTGATTTCTCG
TTTTGCTCAATTACTTTGGGAGGAACCGTCAATTATAGGATATGCTAATGTGAGGTATGGTGATAAGTTGGTTATTGGGA
TGATCGGTAAATTGAGGTACTCGGTTAAGGGGGAGGATGAAGTTTTAATTAAGGTATTGGAGGACGCAATTGTGAGGGGT
ATTGGTTCGTCCAGAAGGAATGGGTTTGGTGTTGTAAGAATTAAGGGGGTGGAGGCAAGCTGGTTACGATAA

Upstream 100 bases:

>100_bases
TTGTGCTTCAACGTATTCGTCTATAAGCCTAGCCGAAATGCCATAATAATGAAAGTAGGCGAATTCAAAAAGCTTCTGAG
ATTCCTTAAAGAGGTAACGA

Downstream 100 bases:

>100_bases
TCGGGTCTGATTTGGTTTACCTTAATTATGAAATAGAGAATTATACGAGGAACGTTAAAAGGGTTATTGTCTGCGGAGAC
GTTAAGGGATTTAGGTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MQNTKCVISDITQHSYTFSGRFDMIVAEIFVKPESDAIIPFSSKVGKSLLLDPKNVSISPLKYKGKYLIKYGSVLTFLEV
IGGNVYSFEVGGDERNVYSALINLGDKSLLFNTYWKVVDVEVHEVEVSSIPKNFGVDILTPALIVSPYVKEKRKVFTNKS
EYVFFNNIIDATGFNRGDVKLSEVISRFAQLLWEEPSIIGYANVRYGDKLVIGMIGKLRYSVKGEDEVLIKVLEDAIVRG
IGSSRRNGFGVVRIKGVEASWLR

Sequences:

>Translated_263_residues
MQNTKCVISDITQHSYTFSGRFDMIVAEIFVKPESDAIIPFSSKVGKSLLLDPKNVSISPLKYKGKYLIKYGSVLTFLEV
IGGNVYSFEVGGDERNVYSALINLGDKSLLFNTYWKVVDVEVHEVEVSSIPKNFGVDILTPALIVSPYVKEKRKVFTNKS
EYVFFNNIIDATGFNRGDVKLSEVISRFAQLLWEEPSIIGYANVRYGDKLVIGMIGKLRYSVKGEDEVLIKVLEDAIVRG
IGSSRRNGFGVVRIKGVEASWLR
>Mature_263_residues
MQNTKCVISDITQHSYTFSGRFDMIVAEIFVKPESDAIIPFSSKVGKSLLLDPKNVSISPLKYKGKYLIKYGSVLTFLEV
IGGNVYSFEVGGDERNVYSALINLGDKSLLFNTYWKVVDVEVHEVEVSSIPKNFGVDILTPALIVSPYVKEKRKVFTNKS
EYVFFNNIIDATGFNRGDVKLSEVISRFAQLLWEEPSIIGYANVRYGDKLVIGMIGKLRYSVKGEDEVLIKVLEDAIVRG
IGSSRRNGFGVVRIKGVEASWLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29454; Mature: 29454

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNTKCVISDITQHSYTFSGRFDMIVAEIFVKPESDAIIPFSSKVGKSLLLDPKNVSISP
CCCCEEEEEECCCCCEEECCCHHEEEEEEEECCCCCEEEEEHHHCCCEEEECCCCCEECC
LKYKGKYLIKYGSVLTFLEVIGGNVYSFEVGGDERNVYSALINLGDKSLLFNTYWKVVDV
EEECCEEEEEHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEEEEEEEE
EVHEVEVSSIPKNFGVDILTPALIVSPYVKEKRKVFTNKSEYVFFNNIIDATGFNRGDVK
EEEEEEHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCEEEEECEECCCCCCCCCEE
LSEVISRFAQLLWEEPSIIGYANVRYGDKLVIGMIGKLRYSVKGEDEVLIKVLEDAIVRG
HHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHHHEEEECCCCHHHHHHHHHHHHHHC
IGSSRRNGFGVVRIKGVEASWLR
CCCCCCCCEEEEEEECCCHHCCC
>Mature Secondary Structure
MQNTKCVISDITQHSYTFSGRFDMIVAEIFVKPESDAIIPFSSKVGKSLLLDPKNVSISP
CCCCEEEEEECCCCCEEECCCHHEEEEEEEECCCCCEEEEEHHHCCCEEEECCCCCEECC
LKYKGKYLIKYGSVLTFLEVIGGNVYSFEVGGDERNVYSALINLGDKSLLFNTYWKVVDV
EEECCEEEEEHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEEEEEEEE
EVHEVEVSSIPKNFGVDILTPALIVSPYVKEKRKVFTNKSEYVFFNNIIDATGFNRGDVK
EEEEEEHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCEEEEECEECCCCCCCCCEE
LSEVISRFAQLLWEEPSIIGYANVRYGDKLVIGMIGKLRYSVKGEDEVLIKVLEDAIVRG
HHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHHHEEEECCCCHHHHHHHHHHHHHHC
IGSSRRNGFGVVRIKGVEASWLR
CCCCCCCCEEEEEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA