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The map label for this gene is 15898245

Identifier: 15898245

GI number: 15898245

Start: 1252536

End: 1253594

Strand: Reverse

Name: 15898245

Synonym: SSO1405

Alternate gene names: NA

Gene position: 1253594-1252536 (Counterclockwise)

Preceding gene: 15898247

Following gene: 15898244

Centisome position: 41.89

GC content: 40.32

Gene sequence:

>1059_bases
GTGGTTCATAAGGTATCACAGAGAGAGTTTTCAAGGTGTTATAAACGGAACTGTGACTGTATCTGCCGAAAACCAAAACA
AAGGAGAAATGTATACCTAAATTATAGTCTTGAACTCCTCATAACTATTTTTAAAGAGGTAATACCAAATTTACCTATGG
ATAAGAAAATAGCGTTCGTTAAGGATTATGGTGCCTATTTAAAGGTTGAGAAGGGATTAATAACCTGTAAGATAAAGAAT
CAAGTGAAGTGGTCCATTGCCCCTACAGAACTCCATTCCATAGTCGTTCTAACGAACTCCTCCATTTCATCTGAAGTGGT
AAAGGTCGCAAATGAGTACGGAATAGAAATAGTTTTCTTCAACAAACATGAACCCTATGCAAAGCTAATCCCTGCGAAAT
ACGCCGGTTCATTTAAGGTTTGGCTGAAACAGTTAACTGCTTGGAAGAGGAGGAAAGTCGAATTCGCAAAGGCGTTTATT
TACGGTAAAGTTCACAACCAATGGGTTACGTTAAGGTATTATGAGAGGAAATACGGGTATAATCTAACGAGTCAAGAGTT
GGATAGATTGGCTAGGGAAATCACGTTCGTTAACACTGCTGAGGAGGTGATGCAAAAAGAGGCTGAGGCTGCTAAGGTTT
ATTGGAGGGGAGTTAAATCTTTACTGCCTAAGTCCTTGGGATTTAAGGGGAGGATGAAGAGGGTTAGCGATAACTTAGAT
CCCTTTAATAGGGCCTTGAATATAGGTTATGGAATGCTGAGGAAGGTCGTTTGGGGGGCAGTGATATCAGTTGGATTAAA
TCCGTACATAGGGTTTTTACACAAGTTCAGGAGTGGTAGAATATCGTTAGTGTTTGACTTAATGGAGGAGTTTAGGAGTC
CCTTTGTTGATAGGAAGCTAATTGGATTAGCGAGGGAGAGTGCGGATAAGGTAACTGACTTGAAAACAGTCTACTCTTTA
TTCTCTGACGTGAAGGAGGATGAGATTTACACTCAGGCTAGAAGGTTAGTTAACGCTATACTGAATGACGAGGAATACAG
ACCATACCTAGCGAAGTGA

Upstream 100 bases:

>100_bases
GTGGAATAATTACGTCATTTGAGGGTTTTAATCGAAATGTAAGTGTGTAAATCACAGTATATTAAATGGATTAACGTAAC
TTTAAACTTAACTCGAAATA

Downstream 100 bases:

>100_bases
AATGGCAATGCTTTACCTAATATTTTACGACATTACTGATGATAATCTTAGGAATAGGGTTGCTGAGTTCTTGAAGAAGA
AGGGGTTGGATAGAATACAG

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Protein; CRISPR-Associated Protein Cas1 Family; Cytoplasmic Protein; Maturase-Related Protein; DNA Polymerase; CRISPR-Associated ; CRISPR-Associated Cas1/Cas4 Family Protein; Cas1 Family CRISPR-Associated Protein; Protein Be Involved In DNA Repair; Crispr-; Crispr-Associated A; DNA Repair Protein; CRISPR-Associated DNA Polymerase

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MVHKVSQREFSRCYKRNCDCICRKPKQRRNVYLNYSLELLITIFKEVIPNLPMDKKIAFVKDYGAYLKVEKGLITCKIKN
QVKWSIAPTELHSIVVLTNSSISSEVVKVANEYGIEIVFFNKHEPYAKLIPAKYAGSFKVWLKQLTAWKRRKVEFAKAFI
YGKVHNQWVTLRYYERKYGYNLTSQELDRLAREITFVNTAEEVMQKEAEAAKVYWRGVKSLLPKSLGFKGRMKRVSDNLD
PFNRALNIGYGMLRKVVWGAVISVGLNPYIGFLHKFRSGRISLVFDLMEEFRSPFVDRKLIGLARESADKVTDLKTVYSL
FSDVKEDEIYTQARRLVNAILNDEEYRPYLAK

Sequences:

>Translated_352_residues
MVHKVSQREFSRCYKRNCDCICRKPKQRRNVYLNYSLELLITIFKEVIPNLPMDKKIAFVKDYGAYLKVEKGLITCKIKN
QVKWSIAPTELHSIVVLTNSSISSEVVKVANEYGIEIVFFNKHEPYAKLIPAKYAGSFKVWLKQLTAWKRRKVEFAKAFI
YGKVHNQWVTLRYYERKYGYNLTSQELDRLAREITFVNTAEEVMQKEAEAAKVYWRGVKSLLPKSLGFKGRMKRVSDNLD
PFNRALNIGYGMLRKVVWGAVISVGLNPYIGFLHKFRSGRISLVFDLMEEFRSPFVDRKLIGLARESADKVTDLKTVYSL
FSDVKEDEIYTQARRLVNAILNDEEYRPYLAK
>Mature_352_residues
MVHKVSQREFSRCYKRNCDCICRKPKQRRNVYLNYSLELLITIFKEVIPNLPMDKKIAFVKDYGAYLKVEKGLITCKIKN
QVKWSIAPTELHSIVVLTNSSISSEVVKVANEYGIEIVFFNKHEPYAKLIPAKYAGSFKVWLKQLTAWKRRKVEFAKAFI
YGKVHNQWVTLRYYERKYGYNLTSQELDRLAREITFVNTAEEVMQKEAEAAKVYWRGVKSLLPKSLGFKGRMKRVSDNLD
PFNRALNIGYGMLRKVVWGAVISVGLNPYIGFLHKFRSGRISLVFDLMEEFRSPFVDRKLIGLARESADKVTDLKTVYSL
FSDVKEDEIYTQARRLVNAILNDEEYRPYLAK

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41079; Mature: 41079

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHKVSQREFSRCYKRNCDCICRKPKQRRNVYLNYSLELLITIFKEVIPNLPMDKKIAFV
CCCCCHHHHHHHHHHCCCCCEECCCHHHCCEEEEHHHHHHHHHHHHHHCCCCCCCCEEHH
KDYGAYLKVEKGLITCKIKNQVKWSIAPTELHSIVVLTNSSISSEVVKVANEYGIEIVFF
HHCCCEEEEECCEEEEEECCCEEEEECHHHHEEEEEEECCCHHHHHHHHHHHCCEEEEEE
NKHEPYAKLIPAKYAGSFKVWLKQLTAWKRRKVEFAKAFIYGKVHNQWVTLRYYERKYGY
CCCCCHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEHHHHCC
NLTSQELDRLAREITFVNTAEEVMQKEAEAAKVYWRGVKSLLPKSLGFKGRMKRVSDNLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHCCCC
PFNRALNIGYGMLRKVVWGAVISVGLNPYIGFLHKFRSGRISLVFDLMEEFRSPFVDRKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH
IGLARESADKVTDLKTVYSLFSDVKEDEIYTQARRLVNAILNDEEYRPYLAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVHKVSQREFSRCYKRNCDCICRKPKQRRNVYLNYSLELLITIFKEVIPNLPMDKKIAFV
CCCCCHHHHHHHHHHCCCCCEECCCHHHCCEEEEHHHHHHHHHHHHHHCCCCCCCCEEHH
KDYGAYLKVEKGLITCKIKNQVKWSIAPTELHSIVVLTNSSISSEVVKVANEYGIEIVFF
HHCCCEEEEECCEEEEEECCCEEEEECHHHHEEEEEEECCCHHHHHHHHHHHCCEEEEEE
NKHEPYAKLIPAKYAGSFKVWLKQLTAWKRRKVEFAKAFIYGKVHNQWVTLRYYERKYGY
CCCCCHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEHHHHCC
NLTSQELDRLAREITFVNTAEEVMQKEAEAAKVYWRGVKSLLPKSLGFKGRMKRVSDNLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHCCCC
PFNRALNIGYGMLRKVVWGAVISVGLNPYIGFLHKFRSGRISLVFDLMEEFRSPFVDRKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH
IGLARESADKVTDLKTVYSLFSDVKEDEIYTQARRLVNAILNDEEYRPYLAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA