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The map label for this gene is 15898240

Identifier: 15898240

GI number: 15898240

Start: 1248041

End: 1248832

Strand: Direct

Name: 15898240

Synonym: SSO1400

Alternate gene names: NA

Gene position: 1248041-1248832 (Clockwise)

Preceding gene: 15898239

Following gene: 15898241

Centisome position: 41.71

GC content: 36.99

Gene sequence:

>792_bases
ATGAAAGGTGTTGTTATTTTCGGTATTCACCATTGGGGTTTTTCAGTTAGAGTTCCCAGAACTTCCGCAGGTGGAAGTTC
TTATATTGTTCCTCCCATAACGACTATTTTGGGTGCGTTAAGTAGAGGTTACTGTAGTGATTACGCTGTTAAGAACAACG
TTTCTTGTACTAAGGAGTTCATAGATAAATTCTCATCTGATCTCTTCTGGGTTACTTACGGTACTGAGGAACATATGCTA
ATGCCCTATTCAGATCTCTTGAGGGAGGAGAGAGTACCATATAGACAGTCAAAGAATAGAAGTTTGGATCACGTAAGTGA
TTGGTTTGGAGTTTCAGCATTTGGAAAAGTTTACTGTGAAAACGTAAATTTTAGTATATTATTGCTACTGAACAAGGAAA
ATTCCGAATTCTGGAGTAAATTGGGTTGGCAAATAATATCATTAGGCACAAAGGAGTCGTTAGTTACAATAACTGATGTA
AAGGTAGTTGACGTAGAGGAAAGTAGTGATGAGGATATTTATACGATATACTATATACCGGCAGAATGTTTAACAAATAC
AGAAGAGTTTGAAGTAGTGAACATGCCCGTAAAGAGCGTGTATGAGCTTTCCAGTAAGCCGAGTATTGGAGTTTTCTCAA
ATTTCTTAGTCCCAAGGAAGACTCCATTTATAGGAGGAAAGGTAAAGGTTAAGAAGAGTAACGTGAGAGGAGACATATGC
AAGGTTTATAAAATGGCTGATAAATACGTGATAACCTTTAAGGAGGGATTAGAGAAATGGTATTCAAAATAA

Upstream 100 bases:

>100_bases
CGCTAAAATTTTGAATATTAAACGGCCCGTAGTAAAGTACTATCTAAAGGAGGAGAAAGGTAACGTCAATACGCCAATAG
ATGCGTTTACGGTAATGTAA

Downstream 100 bases:

>100_bases
ATCTTCCACCTGAGGGATTATTTGCTAGAAGTCTAGTAATAAGTGAACTATTAGGTTTAAATAACGTTGGGATTAGCATA
GATAATGATGTAGTAAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MKGVVIFGIHHWGFSVRVPRTSAGGSSYIVPPITTILGALSRGYCSDYAVKNNVSCTKEFIDKFSSDLFWVTYGTEEHML
MPYSDLLREERVPYRQSKNRSLDHVSDWFGVSAFGKVYCENVNFSILLLLNKENSEFWSKLGWQIISLGTKESLVTITDV
KVVDVEESSDEDIYTIYYIPAECLTNTEEFEVVNMPVKSVYELSSKPSIGVFSNFLVPRKTPFIGGKVKVKKSNVRGDIC
KVYKMADKYVITFKEGLEKWYSK

Sequences:

>Translated_263_residues
MKGVVIFGIHHWGFSVRVPRTSAGGSSYIVPPITTILGALSRGYCSDYAVKNNVSCTKEFIDKFSSDLFWVTYGTEEHML
MPYSDLLREERVPYRQSKNRSLDHVSDWFGVSAFGKVYCENVNFSILLLLNKENSEFWSKLGWQIISLGTKESLVTITDV
KVVDVEESSDEDIYTIYYIPAECLTNTEEFEVVNMPVKSVYELSSKPSIGVFSNFLVPRKTPFIGGKVKVKKSNVRGDIC
KVYKMADKYVITFKEGLEKWYSK
>Mature_263_residues
MKGVVIFGIHHWGFSVRVPRTSAGGSSYIVPPITTILGALSRGYCSDYAVKNNVSCTKEFIDKFSSDLFWVTYGTEEHML
MPYSDLLREERVPYRQSKNRSLDHVSDWFGVSAFGKVYCENVNFSILLLLNKENSEFWSKLGWQIISLGTKESLVTITDV
KVVDVEESSDEDIYTIYYIPAECLTNTEEFEVVNMPVKSVYELSSKPSIGVFSNFLVPRKTPFIGGKVKVKKSNVRGDIC
KVYKMADKYVITFKEGLEKWYSK

Specific function: Unknown

COG id: COG1688

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29957; Mature: 29957

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGVVIFGIHHWGFSVRVPRTSAGGSSYIVPPITTILGALSRGYCSDYAVKNNVSCTKEF
CCCEEEEEEEECCEEEEECCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH
IDKFSSDLFWVTYGTEEHMLMPYSDLLREERVPYRQSKNRSLDHVSDWFGVSAFGKVYCE
HHHHCCCEEEEEECCCCCEECCHHHHHHHHCCCCHHCCCCCHHHHHHHHCHHHHHHEEEC
NVNFSILLLLNKENSEFWSKLGWQIISLGTKESLVTITDVKVVDVEESSDEDIYTIYYIP
CCCEEEEEEEECCCHHHHHHHCEEEEECCCCCCEEEEEEEEEEEECCCCCCCEEEEEEEC
AECLTNTEEFEVVNMPVKSVYELSSKPSIGVFSNFLVPRKTPFIGGKVKVKKSNVRGDIC
HHHHCCCCCEEEEECCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCHHH
KVYKMADKYVITFKEGLEKWYSK
HHHHHHCCEEEEHHHHHHHHHCC
>Mature Secondary Structure
MKGVVIFGIHHWGFSVRVPRTSAGGSSYIVPPITTILGALSRGYCSDYAVKNNVSCTKEF
CCCEEEEEEEECCEEEEECCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH
IDKFSSDLFWVTYGTEEHMLMPYSDLLREERVPYRQSKNRSLDHVSDWFGVSAFGKVYCE
HHHHCCCEEEEEECCCCCEECCHHHHHHHHCCCCHHCCCCCHHHHHHHHCHHHHHHEEEC
NVNFSILLLLNKENSEFWSKLGWQIISLGTKESLVTITDVKVVDVEESSDEDIYTIYYIP
CCCEEEEEEEECCCHHHHHHHCEEEEECCCCCCEEEEEEEEEEEECCCCCCCEEEEEEEC
AECLTNTEEFEVVNMPVKSVYELSSKPSIGVFSNFLVPRKTPFIGGKVKVKKSNVRGDIC
HHHHCCCCCEEEEECCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCHHH
KVYKMADKYVITFKEGLEKWYSK
HHHHHHCCEEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA