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The map label for this gene is 15898231

Identifier: 15898231

GI number: 15898231

Start: 1231762

End: 1232895

Strand: Reverse

Name: 15898231

Synonym: SSO1389

Alternate gene names: NA

Gene position: 1232895-1231762 (Counterclockwise)

Preceding gene: 15898244

Following gene: 15898228

Centisome position: 41.2

GC content: 40.48

Gene sequence:

>1134_bases
ATGGCATCAATAGTTTTCTCGACTATTGGAAACCCAAAGGGTTATCAAAAAGTCACTTATGAAATAGATGGAGAGAAATT
CGAGAGCAACGTAAGCGTATTAGCATTGAGGGATCTCTTGAAGGTTGACAAAACCGTAGTGATTTTGGGAATTAGCGTAG
CTGACGTTTACAACTGCAAATATGCTGACTATCGTTCGTGTAAGGAGTGTATAATTCAAAACAGTAAGAACGACCTTGGA
ATCAGCGAAAGCTATGTAGTGGCACCAAACGTTTATCAGAAATTTAAGGGTAAGCCAGATCACTACTTTACTTACATTTA
CTACCACTCATTAAGAATCCTTGAAAAAGAAGGGATAAACGAAGTTTTCATTGATACAACACACGGCATAAACTACATGG
GGGTTCTGGCAAAGGAGGCCATACAGCTTGCAGTATCAGCTTACGCTGCAAAGAGCGAAAAGGAAGTGAAGGTTAGTTTA
TACAACTCAGACCCAGTTGGTAAAGACGTCAGCGATACTGTTAAACTTCACGAGATTGAAGCCATAAAGATTTCACCGCT
TTCCGGCCTTAAGTACGTTACCTATCAAATTCTCAACAAGGACAAGAACTTCTTCAACAAGATATTTAGTGATTCCGTTA
ACGCTATTCCCAGGTTTGCCACTGCCCTAGATAATGGTTTGTTCATTTACTTGTCTGAGAAGGACTCCTCCTTGCACTTA
AAGCGCTTGGAGGATGATTTGAGCAAAGACCCCTTATTGACTCCCTCCGAAAACGAAATAAACGTTGTTTACAAGGATAT
GAAGTATGCCTTATCCCACGCTTTGTTTTACGTAATTTCCAGATTTAGTGGAAATGTTGACTTGGACACGCTAAGGCACT
ACGCCGAGACTTACGCAGATAAAGTTACTAGAGCCATTATTGAGAACGAAGTTGACAAGATTGAGAAGTATCAGATGGGA
AGCGAGAGGAAGTTGTTGGGGGAGTATATGAAGGTAGAGGGTAAGGGGTTTGATAAAAGAATATTATACGCCCATGGTGG
TTTACCCTATGCTGGTACTTATGTCTACAAGGAGAAGGATAAGGTTTACGTAACGTACGGGGATAAGATTGATGAGATTG
AGAGACAGATATAA

Upstream 100 bases:

>100_bases
ACAAAAAGATTATATACATCAGCTCTTACCAAATAACTGTTGTAATCGTTATCGTGAAAGCTAATAAAAAATTTTAACTT
TTTTTCTCATATAAGACTCT

Downstream 100 bases:

>100_bases
GGAGTGTAAGGAAAGGAGAAAAATTGTGAAATTCTGAGCAGTGATTGTCATGAAAAGTTTGTAAAGTGCTATCTCTGAAT
AAATATTTGATGAAATCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MASIVFSTIGNPKGYQKVTYEIDGEKFESNVSVLALRDLLKVDKTVVILGISVADVYNCKYADYRSCKECIIQNSKNDLG
ISESYVVAPNVYQKFKGKPDHYFTYIYYHSLRILEKEGINEVFIDTTHGINYMGVLAKEAIQLAVSAYAAKSEKEVKVSL
YNSDPVGKDVSDTVKLHEIEAIKISPLSGLKYVTYQILNKDKNFFNKIFSDSVNAIPRFATALDNGLFIYLSEKDSSLHL
KRLEDDLSKDPLLTPSENEINVVYKDMKYALSHALFYVISRFSGNVDLDTLRHYAETYADKVTRAIIENEVDKIEKYQMG
SERKLLGEYMKVEGKGFDKRILYAHGGLPYAGTYVYKEKDKVYVTYGDKIDEIERQI

Sequences:

>Translated_377_residues
MASIVFSTIGNPKGYQKVTYEIDGEKFESNVSVLALRDLLKVDKTVVILGISVADVYNCKYADYRSCKECIIQNSKNDLG
ISESYVVAPNVYQKFKGKPDHYFTYIYYHSLRILEKEGINEVFIDTTHGINYMGVLAKEAIQLAVSAYAAKSEKEVKVSL
YNSDPVGKDVSDTVKLHEIEAIKISPLSGLKYVTYQILNKDKNFFNKIFSDSVNAIPRFATALDNGLFIYLSEKDSSLHL
KRLEDDLSKDPLLTPSENEINVVYKDMKYALSHALFYVISRFSGNVDLDTLRHYAETYADKVTRAIIENEVDKIEKYQMG
SERKLLGEYMKVEGKGFDKRILYAHGGLPYAGTYVYKEKDKVYVTYGDKIDEIERQI
>Mature_376_residues
ASIVFSTIGNPKGYQKVTYEIDGEKFESNVSVLALRDLLKVDKTVVILGISVADVYNCKYADYRSCKECIIQNSKNDLGI
SESYVVAPNVYQKFKGKPDHYFTYIYYHSLRILEKEGINEVFIDTTHGINYMGVLAKEAIQLAVSAYAAKSEKEVKVSLY
NSDPVGKDVSDTVKLHEIEAIKISPLSGLKYVTYQILNKDKNFFNKIFSDSVNAIPRFATALDNGLFIYLSEKDSSLHLK
RLEDDLSKDPLLTPSENEINVVYKDMKYALSHALFYVISRFSGNVDLDTLRHYAETYADKVTRAIIENEVDKIEKYQMGS
ERKLLGEYMKVEGKGFDKRILYAHGGLPYAGTYVYKEKDKVYVTYGDKIDEIERQI

Specific function: Unknown

COG id: COG1517

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019016
- InterPro:   IPR013383
- InterPro:   IPR010171 [H]

Pfam domain/function: PF09455 Cas_DxTHG [H]

EC number: NA

Molecular weight: Translated: 42929; Mature: 42798

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIVFSTIGNPKGYQKVTYEIDGEKFESNVSVLALRDLLKVDKTVVILGISVADVYNCK
CCEEEEECCCCCCCCEEEEEEECCCHHHCCCHHHHHHHHHHCCCEEEEEEEEHHHHHCCC
YADYRSCKECIIQNSKNDLGISESYVVAPNVYQKFKGKPDHYFTYIYYHSLRILEKEGIN
CCCHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHCCCCCCEEEEEEEEEEHHHHHCCCC
EVFIDTTHGINYMGVLAKEAIQLAVSAYAAKSEKEVKVSLYNSDPVGKDVSDTVKLHEIE
EEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHCEEEEEEE
AIKISPLSGLKYVTYQILNKDKNFFNKIFSDSVNAIPRFATALDNGLFIYLSEKDSSLHL
EEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHH
KRLEDDLSKDPLLTPSENEINVVYKDMKYALSHALFYVISRFSGNVDLDTLRHYAETYAD
HHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KVTRAIIENEVDKIEKYQMGSERKLLGEYMKVEGKGFDKRILYAHGGLPYAGTYVYKEKD
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEECCC
KVYVTYGDKIDEIERQI
EEEEEECCCHHHHHHCC
>Mature Secondary Structure 
ASIVFSTIGNPKGYQKVTYEIDGEKFESNVSVLALRDLLKVDKTVVILGISVADVYNCK
CEEEEECCCCCCCCEEEEEEECCCHHHCCCHHHHHHHHHHCCCEEEEEEEEHHHHHCCC
YADYRSCKECIIQNSKNDLGISESYVVAPNVYQKFKGKPDHYFTYIYYHSLRILEKEGIN
CCCHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHCCCCCCEEEEEEEEEEHHHHHCCCC
EVFIDTTHGINYMGVLAKEAIQLAVSAYAAKSEKEVKVSLYNSDPVGKDVSDTVKLHEIE
EEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHCEEEEEEE
AIKISPLSGLKYVTYQILNKDKNFFNKIFSDSVNAIPRFATALDNGLFIYLSEKDSSLHL
EEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHH
KRLEDDLSKDPLLTPSENEINVVYKDMKYALSHALFYVISRFSGNVDLDTLRHYAETYAD
HHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KVTRAIIENEVDKIEKYQMGSERKLLGEYMKVEGKGFDKRILYAHGGLPYAGTYVYKEKD
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEECCC
KVYVTYGDKIDEIERQI
EEEEEECCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]