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The map label for this gene is 15898211

Identifier: 15898211

GI number: 15898211

Start: 1207453

End: 1207842

Strand: Reverse

Name: 15898211

Synonym: SSO1372

Alternate gene names: NA

Gene position: 1207842-1207453 (Counterclockwise)

Preceding gene: 15898212

Following gene: 15898210

Centisome position: 40.37

GC content: 43.08

Gene sequence:

>390_bases
GTGTATGGGGTGATGAGGGAGGATTTGTGGATTTGGACAGTCCTGGCTGATGGGGTGCCTTTTTACGAGTTTGGGGATAG
GAGTTATGGGACTTTTCGTTATCTCTTGGGTTGGTTAACTAGGAGTGAGGTAAACTATACTGACTACTACTGTGTTTATC
AAGTTCTCGATAATCGTGTAGCGGGTAAGAAGTATACTTATCTTGTGGAGAGTCATAATTCTTGGTGTAGGTTGGCGAGG
CTGGCTAGGGATACTAAAGCTGTTAATAGGAGTATAAGAATGGCGGAGTACAGTTTAGCCTTGTCAAATGTAATGTACCC
TCGCGTGTTTTCAAGAGAGGGAACTCCCTTGAACGAGGCTTACTTGAAGGAAGTACAGTATATTAGATAA

Upstream 100 bases:

>100_bases
GCAGCCAATAGATTAGAACGTTAGTGCTTTCAGAAAGTTTATAGCTTTAGGCAAAGGATATACCACTAGATCATAGTCTA
AGAACTTTTCCAAAATACTA

Downstream 100 bases:

>100_bases
ACTTGATATAATTTTACTAATACTTCTTGAATAAGATGACTGCATGAGAACACTCCCCGCGTCTCGGCTAGTTAATTGTC
TTCATGTAATTAATTTCATA

Product: partial transposase ISC1173

Products: NA

Alternate protein names: Second ORF In Transposon ISC; Transposase ISC; Partial Transposase ISC; Partial Transposase In ISC

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MYGVMREDLWIWTVLADGVPFYEFGDRSYGTFRYLLGWLTRSEVNYTDYYCVYQVLDNRVAGKKYTYLVESHNSWCRLAR
LARDTKAVNRSIRMAEYSLALSNVMYPRVFSREGTPLNEAYLKEVQYIR

Sequences:

>Translated_129_residues
MYGVMREDLWIWTVLADGVPFYEFGDRSYGTFRYLLGWLTRSEVNYTDYYCVYQVLDNRVAGKKYTYLVESHNSWCRLAR
LARDTKAVNRSIRMAEYSLALSNVMYPRVFSREGTPLNEAYLKEVQYIR
>Mature_129_residues
MYGVMREDLWIWTVLADGVPFYEFGDRSYGTFRYLLGWLTRSEVNYTDYYCVYQVLDNRVAGKKYTYLVESHNSWCRLAR
LARDTKAVNRSIRMAEYSLALSNVMYPRVFSREGTPLNEAYLKEVQYIR

Specific function: Unknown

COG id: COG1662

COG function: function code L; Transposase and inactivated derivatives, IS1 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15376; Mature: 15376

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGVMREDLWIWTVLADGVPFYEFGDRSYGTFRYLLGWLTRSEVNYTDYYCVYQVLDNRV
CCCCCCCHHEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
AGKKYTYLVESHNSWCRLARLARDTKAVNRSIRMAEYSLALSNVMYPRVFSREGTPLNEA
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHH
YLKEVQYIR
HHHHHHHCC
>Mature Secondary Structure
MYGVMREDLWIWTVLADGVPFYEFGDRSYGTFRYLLGWLTRSEVNYTDYYCVYQVLDNRV
CCCCCCCHHEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
AGKKYTYLVESHNSWCRLARLARDTKAVNRSIRMAEYSLALSNVMYPRVFSREGTPLNEA
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHH
YLKEVQYIR
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA