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The map label for this gene is nodC-like [H]

Identifier: 15898141

GI number: 15898141

Start: 1127121

End: 1128389

Strand: Reverse

Name: nodC-like [H]

Synonym: SSO1299

Alternate gene names: 15898141

Gene position: 1128389-1127121 (Counterclockwise)

Preceding gene: 15898142

Following gene: 15898140

Centisome position: 37.71

GC content: 35.22

Gene sequence:

>1269_bases
TTGGCATTGATAACATTAGAGATTATGCTATACGAATTAGAAAACGTGCTGTATATGCTTGAATACGGTGTCTTCATATA
TTTTCCAGTGAATTTTGCAATATTCTTCTTGTTTAGACAGTTTTTATTGCGCCATTTCTCTAAAAGCTATAAACCTTATA
TCAGTGGTTTAAGTAGAGATAAGGTAAAAGTAAGTGCAATAGTTCCAGAGTACGGTGAGAATCTTGAGATTTTTGAAAAA
TGTCTTAGATCAGTTGCAAAAAATAAACCAGATGAGATAATAGTAGTCCACGATGATAAGAGAAAGGAAGTAGTGGATAT
ATCCAAAAAGTATGGTGCTAAGGTTATAAGCCTTAGTAGAAGGGTTGGTAAACGCGGTGCATTAATCATAGGTTGGTTAA
ACGCAATTGGAGATATAATAGTTCAGTTAGATAGTGATACGATTATGGAAGATAATACTATTAATGAAATCGTTAAACCG
TTTGCGGACCCTAAGGTAGCTGGAGTTCAAGGGAGACCAGTATTATTCAGAACTGATGGCAGAATTCCCTATTTGTTTGG
ACAAATAATAGAGTATAGTAGGGATATTGTTGTTAGAGCGTTAAATGGAACGTTAAATGTGATTGATGGAAAGATTGCCG
CTTACAGAAGAAGTTATCTACTAGAGACTATAAGGCATTTCAATCACGAGACTTACGGAAAGAGAAAACTAATTGCTGCA
GACGATAAAGCACTGACTTATTACGCAAATATGAATGGTTATAAGACAGTCTATCAAGCTACGGCAGTGGCTAAATCAGC
GGCCCAACCTACGTTTTTAAAATTCCTCAACCAGCAGTTAAGATGGGCTAGAAGCGGTTATCTTTACCTAATTAAGGAAA
TGAGGAGTGGCTTATTTTTCAAAATGCCCGGAAAATATAGATTTCATATGTTAACATATCTATTAGCTCCATTTTCATTT
GCTTTGGCATTAATAGACACGCTCTTAGTTCCTGGAAATCCCACTGCATTGACTTGGAGTTATTTAGCCTATTATGGATT
TAACATACCTATAATATTATATTCGCTCCTTATCTTTATTTTTGGTCTTTACTTAAGTATGAAAATATCTTTTGGAATCT
TGAACCTTAAACTCCCAGATAAAATATCCTTCGTTGATCTTATTACACTAGGCATTCTCGGTTTATTCGTAATATTCCCC
ATGTTTATATATGCAGCAATCACCCATTACGGTGTTTCCGAATGGAGGGGAAGTAGCTATTTGGGTTAG

Upstream 100 bases:

>100_bases
TTATTTAAATATTATTATTTTTCTAAGTTGTGAACTGTGTATAATTCATAGTTATTATATATCTAATTTTGATGAAAAAA
ACATAAGGATTTATAAGCTT

Downstream 100 bases:

>100_bases
GTGGGAAAAATGGATAAAATCTTAGTTTCAAAAAATGAGTTAATAGAAGATGATTTAATTAATGATTATTTAATGGAAAT
GGTTAAAAAATTAGATCAGA

Product: N-acetylglucosaminyltransferase related protein (nodC-like)

Products: NA

Alternate protein names: Nodulation protein C [H]

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MALITLEIMLYELENVLYMLEYGVFIYFPVNFAIFFLFRQFLLRHFSKSYKPYISGLSRDKVKVSAIVPEYGENLEIFEK
CLRSVAKNKPDEIIVVHDDKRKEVVDISKKYGAKVISLSRRVGKRGALIIGWLNAIGDIIVQLDSDTIMEDNTINEIVKP
FADPKVAGVQGRPVLFRTDGRIPYLFGQIIEYSRDIVVRALNGTLNVIDGKIAAYRRSYLLETIRHFNHETYGKRKLIAA
DDKALTYYANMNGYKTVYQATAVAKSAAQPTFLKFLNQQLRWARSGYLYLIKEMRSGLFFKMPGKYRFHMLTYLLAPFSF
ALALIDTLLVPGNPTALTWSYLAYYGFNIPIILYSLLIFIFGLYLSMKISFGILNLKLPDKISFVDLITLGILGLFVIFP
MFIYAAITHYGVSEWRGSSYLG

Sequences:

>Translated_422_residues
MALITLEIMLYELENVLYMLEYGVFIYFPVNFAIFFLFRQFLLRHFSKSYKPYISGLSRDKVKVSAIVPEYGENLEIFEK
CLRSVAKNKPDEIIVVHDDKRKEVVDISKKYGAKVISLSRRVGKRGALIIGWLNAIGDIIVQLDSDTIMEDNTINEIVKP
FADPKVAGVQGRPVLFRTDGRIPYLFGQIIEYSRDIVVRALNGTLNVIDGKIAAYRRSYLLETIRHFNHETYGKRKLIAA
DDKALTYYANMNGYKTVYQATAVAKSAAQPTFLKFLNQQLRWARSGYLYLIKEMRSGLFFKMPGKYRFHMLTYLLAPFSF
ALALIDTLLVPGNPTALTWSYLAYYGFNIPIILYSLLIFIFGLYLSMKISFGILNLKLPDKISFVDLITLGILGLFVIFP
MFIYAAITHYGVSEWRGSSYLG
>Mature_421_residues
ALITLEIMLYELENVLYMLEYGVFIYFPVNFAIFFLFRQFLLRHFSKSYKPYISGLSRDKVKVSAIVPEYGENLEIFEKC
LRSVAKNKPDEIIVVHDDKRKEVVDISKKYGAKVISLSRRVGKRGALIIGWLNAIGDIIVQLDSDTIMEDNTINEIVKPF
ADPKVAGVQGRPVLFRTDGRIPYLFGQIIEYSRDIVVRALNGTLNVIDGKIAAYRRSYLLETIRHFNHETYGKRKLIAAD
DKALTYYANMNGYKTVYQATAVAKSAAQPTFLKFLNQQLRWARSGYLYLIKEMRSGLFFKMPGKYRFHMLTYLLAPFSFA
LALIDTLLVPGNPTALTWSYLAYYGFNIPIILYSLLIFIFGLYLSMKISFGILNLKLPDKISFVDLITLGILGLFVIFPM
FIYAAITHYGVSEWRGSSYLG

Specific function: Involved in the synthesis of Nod factor, a sulfated N- acyl-beta-1,4-tetrasaccharide of N-acetylglucosamine which initiates a series of events in the host plant species leading eventually to nodulation [H]

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nodC/HAS family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=275, Percent_Identity=26.5454545454545, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 48332; Mature: 48200

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALITLEIMLYELENVLYMLEYGVFIYFPVNFAIFFLFRQFLLRHFSKSYKPYISGLSRD
CEEEEHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC
KVKVSAIVPEYGENLEIFEKCLRSVAKNKPDEIIVVHDDKRKEVVDISKKYGAKVISLSR
CEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCHHHHHHHH
RVGKRGALIIGWLNAIGDIIVQLDSDTIMEDNTINEIVKPFADPKVAGVQGRPVLFRTDG
HHCCCCCEEEEHHHHHHHHEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECC
RIPYLFGQIIEYSRDIVVRALNGTLNVIDGKIAAYRRSYLLETIRHFNHETYGKRKLIAA
CCHHHHHHHHHHHHHHEEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
DDKALTYYANMNGYKTVYQATAVAKSAAQPTFLKFLNQQLRWARSGYLYLIKEMRSGLFF
CCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEE
KMPGKYRFHMLTYLLAPFSFALALIDTLLVPGNPTALTWSYLAYYGFNIPIILYSLLIFI
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHH
FGLYLSMKISFGILNLKLPDKISFVDLITLGILGLFVIFPMFIYAAITHYGVSEWRGSSY
HHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC
LG
CC
>Mature Secondary Structure 
ALITLEIMLYELENVLYMLEYGVFIYFPVNFAIFFLFRQFLLRHFSKSYKPYISGLSRD
EEEEHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC
KVKVSAIVPEYGENLEIFEKCLRSVAKNKPDEIIVVHDDKRKEVVDISKKYGAKVISLSR
CEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCHHHHHHHH
RVGKRGALIIGWLNAIGDIIVQLDSDTIMEDNTINEIVKPFADPKVAGVQGRPVLFRTDG
HHCCCCCEEEEHHHHHHHHEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECC
RIPYLFGQIIEYSRDIVVRALNGTLNVIDGKIAAYRRSYLLETIRHFNHETYGKRKLIAA
CCHHHHHHHHHHHHHHEEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
DDKALTYYANMNGYKTVYQATAVAKSAAQPTFLKFLNQQLRWARSGYLYLIKEMRSGLFF
CCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEE
KMPGKYRFHMLTYLLAPFSFALALIDTLLVPGNPTALTWSYLAYYGFNIPIILYSLLIFI
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHH
FGLYLSMKISFGILNLKLPDKISFVDLITLGILGLFVIFPMFIYAAITHYGVSEWRGSSY
HHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC
LG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2615763; 8146173 [H]