Click here to switch to the map view.

The map label for this gene is 15898071

Identifier: 15898071

GI number: 15898071

Start: 1058964

End: 1059650

Strand: Reverse

Name: 15898071

Synonym: SSO1219

Alternate gene names: NA

Gene position: 1059650-1058964 (Counterclockwise)

Preceding gene: 15898075

Following gene: 15898069

Centisome position: 35.41

GC content: 29.4

Gene sequence:

>687_bases
ATGAGTGATAGGTTATTGGAGATTACGTTTTCCGTAGAACATGAGAATTGTTGGACTAATCTAGTTGGTAAATACGTTGT
GAAAACTTTAAGGTTTTCCGTAGACACTGAGAGGAACTTTATTAGGTCTCTAATTGTTGTGGATAAAAAATACAAGGAGT
TAATAAATAAGATAAAAAGAAATAATAGTTTCATAGGGTACTCATTAGTTTCACTTACAACAGATAATAAGAAAATACTG
TTTGATTTCAGAAAGAGATACAAAAATAGTGTGATGGATAATATAAACTCCGTAGATGGAATAATCTTAGATGGATTTAA
GTATGATGGAAAGGAATATTGGCGAGTTTTATTATATGAAAGTTACGTTAATGAACTGAGAGAGAAGCTTAAGTCAAAAG
GGAATGTAGAGTTTATTAGTTTTCATGAATTAGATATAACTGAGGATGAACTTACTCCATATGAACTCAAAACTTTAATT
TTAGCTTATAAAAATGGATATTTTGATTTTCCTAGGAGGATCAAGTCTGATAAAATATCTAAATTGATAAATATAAGTAA
ATCCACATTCACATATCATTTAAGATCGGCTGAGTCGAGAATAATTAAACGATATATTGACGACCTAAAATTCTACAATG
TAATTAACAATGTCTCTAAGCAAGAAGAGGAGAAAAAGGATAGCTAA

Upstream 100 bases:

>100_bases
TCACTATGAACATTTTTGCTTGATTCAATAGTTTGAGATAAGGAGAATTTTCATAAAGCTTAAAAATTCTAATCGAAAAT
AGTATTATAGGTAAAAATGT

Downstream 100 bases:

>100_bases
AAGATGGCTAAAAATAGTGGTTAAAAATTAATTTTACCACCTGGTTATTACTACCTTCTTATCTGTGAAGAAGTCTACGC
TATCTATTTGCCCATGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Bacterio-Opsin Activator; HTH Domain-Containing Protein

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSDRLLEITFSVEHENCWTNLVGKYVVKTLRFSVDTERNFIRSLIVVDKKYKELINKIKRNNSFIGYSLVSLTTDNKKIL
FDFRKRYKNSVMDNINSVDGIILDGFKYDGKEYWRVLLYESYVNELREKLKSKGNVEFISFHELDITEDELTPYELKTLI
LAYKNGYFDFPRRIKSDKISKLINISKSTFTYHLRSAESRIIKRYIDDLKFYNVINNVSKQEEEKKDS

Sequences:

>Translated_228_residues
MSDRLLEITFSVEHENCWTNLVGKYVVKTLRFSVDTERNFIRSLIVVDKKYKELINKIKRNNSFIGYSLVSLTTDNKKIL
FDFRKRYKNSVMDNINSVDGIILDGFKYDGKEYWRVLLYESYVNELREKLKSKGNVEFISFHELDITEDELTPYELKTLI
LAYKNGYFDFPRRIKSDKISKLINISKSTFTYHLRSAESRIIKRYIDDLKFYNVINNVSKQEEEKKDS
>Mature_227_residues
SDRLLEITFSVEHENCWTNLVGKYVVKTLRFSVDTERNFIRSLIVVDKKYKELINKIKRNNSFIGYSLVSLTTDNKKILF
DFRKRYKNSVMDNINSVDGIILDGFKYDGKEYWRVLLYESYVNELREKLKSKGNVEFISFHELDITEDELTPYELKTLIL
AYKNGYFDFPRRIKSDKISKLINISKSTFTYHLRSAESRIIKRYIDDLKFYNVINNVSKQEEEKKDS

Specific function: Unknown

COG id: COG3413

COG function: function code R; Predicted DNA binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27188; Mature: 27057

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRLLEITFSVEHENCWTNLVGKYVVKTLRFSVDTERNFIRSLIVVDKKYKELINKIKR
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NNSFIGYSLVSLTTDNKKILFDFRKRYKNSVMDNINSVDGIILDGFKYDGKEYWRVLLYE
CCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECEECCCHHHHHHHHHH
SYVNELREKLKSKGNVEFISFHELDITEDELTPYELKTLILAYKNGYFDFPRRIKSDKIS
HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KLINISKSTFTYHLRSAESRIIKRYIDDLKFYNVINNVSKQEEEKKDS
HHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDRLLEITFSVEHENCWTNLVGKYVVKTLRFSVDTERNFIRSLIVVDKKYKELINKIKR
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NNSFIGYSLVSLTTDNKKILFDFRKRYKNSVMDNINSVDGIILDGFKYDGKEYWRVLLYE
CCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECEECCCHHHHHHHHHH
SYVNELREKLKSKGNVEFISFHELDITEDELTPYELKTLILAYKNGYFDFPRRIKSDKIS
HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KLINISKSTFTYHLRSAESRIIKRYIDDLKFYNVINNVSKQEEEKKDS
HHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA