| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
Click here to switch to the map view.
The map label for this gene is 15898025
Identifier: 15898025
GI number: 15898025
Start: 1011604
End: 1014312
Strand: Direct
Name: 15898025
Synonym: SSO1172
Alternate gene names: NA
Gene position: 1011604-1014312 (Clockwise)
Preceding gene: 15898019
Following gene: 15898028
Centisome position: 33.81
GC content: 36.66
Gene sequence:
>2709_bases ATGATAAAAATTGCAATTTTAGCCATGGGTAATTTGCCTAAAACAGCGAAGGCATTTTTAACTCTATTTTTTCTTCTAAG TTTAATTTCTTGTTCATTCCTCATTCCAACATCACAGTCAATAAGCGTAAACTTTACTGTGTCAAGCAATGGTATGGTAT CCATTTATATTGGAGGTATACCATGGAATAACACCGTTATTCTACACTACGGAATAGAGAACGGACCACAACAAGCGTGG ACTAACATCTCAAACGTTGTAATGAAATGGAATGGGCAGAATTTCAGCGCAACCATAGGGCCTTTCGCTAATGGAACCTG GATAGGTTGGGTGTTTTACGATAATACTACTGGACAATGGATAAATTACGATAATCATCCATTCTGGAATTGGAATTTAG AGGTTAATCCTCCAAATGTAGGGCAAACTTACGCTACAGTGCTTCAAAACGGTTCAATATTAATAACTGCAATAGGAAGA GCACCAGACCAGCTCGATATACATTATGGGCTAACTACTGGACCCCAAACGGGATTACCATGGGGTAATATAACTGATGA ATTGATGACTTACAATCCATTATGGGGTAATTATACGATAATCATAGGTCCTTTTAAGCCAGGCCAATGGGTACAATGGG TCTATCACGATCTGACTCTAAATCAATGGTATCACAACACATCTGGTCAAAACTTCGCAATACAAGATGTTTATTCATTC ATTCAATACATCAATGCTTCATATAATAGATATGTTTACGTTGAGGGTCAGCCAGTAAGTGTTATAATATATCTACAGAA CACTATTTCGCAAGCGATTAATTCCTCAATTTCGATTCAGATCGCTGGCAAATTATACAATATCTCCTCAACGTTAAAAC CGGGATATAATCTATTATCCCTAACACTAGATACCTCCCAAATACCACAAGGTATATACTATCCACAATTAAGCATTTAC GTGAATAATACTCTTCAAAGACAAGCAACTCTACCACAATTATATGTCCTAAACACTACTGGAAAGAAGCCCTTAAGTTT AGTAATAGTCTGGAATATGCACCAGCCTCTTTATGTAGCTCCAAATGGTAGTTGGGAGCAACCTTGGGTATGGTTACACA CTGGGCAAGACTTCTACTGGGATGGAAGTTTAGTCGGAGCCTATGAACTTCAAGCGTTATTGATAAGACAGTTTAACGTT AGCGTAACGATAGATTTCACACCTGTTCTATTATATCAATGGGAGACAATACTGCACGAGAAGAATTATAGCTTTACGTC TAATTTTGGAATTATTCCCAATCATGATATATCTGCTGTAAATTATACCATTAATCTCTATAGGCAATTAATTAATGAGG GTAAGGTAGATGTCCTTACAGTGCCATTTTATCATCCTTTACAGCCATTGCTACTTCAAGATGGTTATTGGAGCGACGTC TTAGCTCAAATCAGAATGGGTGAGAATTTCACTCATGAAGTTTTTGGAGTGTGGGCTAATGGAACGTGGACTCCGGAAAT GGCATTTGACATGGATTTAGTAGGACTTTATAATGAGAGTAATATATCCTATACTATACTTGACCAACAAGCCTTCTTAC CTTACGTTACATTGGTTAGAGGTTCGTTGAACCCAGATCAGCCCTTTATCGTAGAGAATAATCTAGGTCAAACTATTATT GTACTATTTAGAAACACAACTTTATCTAACGAATTTGGTTTTAAGTTCTTTAGCCAATCTCCTCAGCTTACTGCACAAGA ACTTATACAACAATTGGCTGAAATATATATGAACAATCCAGGTGGTGTTGTTACAGTTGCTTTAGATGGGGAGAATCCTC TTATTTTCAATCCAAATACTGGCCCAGCTGATCTATACGCAATCTATCAAGCTTTATCCGAATATCAAGGGCAATGGCTA ATAACTCAAACTGCAAGTGAGGCAATAGCTACTCACAAGCCTTACAGTGTAATAACCAATTTACTTGTGAATTCATGGGA TCTTAATCTAAACTATTGGAATAATGGATACCTTGGAAAGACTGAAATATGGCAAAACGTTTCGCTAGCTAGGGAATATC TAGTAGCTTACACTGCAGCTGTTGGAGCCAACATTTCACCATTAGTCTATCTACCTTTGAATGAGACACCTAATTCAACT AATTTATTTGATACATTATGGAATTACCTATATGTTGCAGAAGGTAGTGATTGGACTTGGCAGACTGGTCCTCCAGCCTA TGGTCCATTATGGTTTAAAGAACAAGCACTGCTCTACACTTCTACGATAATTTCAGAGGTTAAACAGCAGTTTGATCTAA TAAAACTACAAAGTGTAAAGTTAGATGGAAATAACTTAAAGCTCGGCATATATAACGGAATCAACACTACGGTACATTTA TTACTGGTAATTACCAACGGTAAGCAAGAAATACAATTACCTATAATATTAAGTCAAGGACAAAACAACTTTAAGATAAA AATATCTAATGTGTCCGGTCAACTTCAAATAGCACTTTATTCTCCTATTTCTGCTTCACAAGTAGGCTTAACATTAATAC CCATTAATAGTTATGGATTCCTAGTAGCCCAATATCAAGTTAATCTAAACAAATCAACAAGTTCCATGGGAACTTACCTG TTGGCGTTAGTTGGTATACTAGTAGTGTCAGCAATAATAGTTATAGTAATGAAGAGGGGGCACATTTAG
Upstream 100 bases:
>100_bases TGGGAATTTTTTAGTTATTAATATAGGGAAAATCATCTATAAGATTTTACATAGCGGGGTAACTTTCAAATAAAACTCTA TGTAAGTAGAAAAGTTTATA
Downstream 100 bases:
>100_bases TTTAAAGTTAATCTTCATCATCTTTTCCATTATTTCCTGCTATTTCAAGTACTTCTGCATAGATAAACCCAGCAATTATC CAAGCGAAGAATATGTAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Amylopullulanase; Glycoside Hydrolase; Membrane Bound Alpha-Amylase; Pullulanase; Glycosy Hydrolase Family Protein; Family; Alpha-Amylase/Alpha-Mannosidase; Amylopullulanase Related Protein; Glycosyl Hydrolase Family; Pullulanase Glycoside Hydrolase Family; Alpha-Dextran Endo-1 6-Alpha-Glucosidase
Number of amino acids: Translated: 902; Mature: 902
Protein sequence:
>902_residues MIKIAILAMGNLPKTAKAFLTLFFLLSLISCSFLIPTSQSISVNFTVSSNGMVSIYIGGIPWNNTVILHYGIENGPQQAW TNISNVVMKWNGQNFSATIGPFANGTWIGWVFYDNTTGQWINYDNHPFWNWNLEVNPPNVGQTYATVLQNGSILITAIGR APDQLDIHYGLTTGPQTGLPWGNITDELMTYNPLWGNYTIIIGPFKPGQWVQWVYHDLTLNQWYHNTSGQNFAIQDVYSF IQYINASYNRYVYVEGQPVSVIIYLQNTISQAINSSISIQIAGKLYNISSTLKPGYNLLSLTLDTSQIPQGIYYPQLSIY VNNTLQRQATLPQLYVLNTTGKKPLSLVIVWNMHQPLYVAPNGSWEQPWVWLHTGQDFYWDGSLVGAYELQALLIRQFNV SVTIDFTPVLLYQWETILHEKNYSFTSNFGIIPNHDISAVNYTINLYRQLINEGKVDVLTVPFYHPLQPLLLQDGYWSDV LAQIRMGENFTHEVFGVWANGTWTPEMAFDMDLVGLYNESNISYTILDQQAFLPYVTLVRGSLNPDQPFIVENNLGQTII VLFRNTTLSNEFGFKFFSQSPQLTAQELIQQLAEIYMNNPGGVVTVALDGENPLIFNPNTGPADLYAIYQALSEYQGQWL ITQTASEAIATHKPYSVITNLLVNSWDLNLNYWNNGYLGKTEIWQNVSLAREYLVAYTAAVGANISPLVYLPLNETPNST NLFDTLWNYLYVAEGSDWTWQTGPPAYGPLWFKEQALLYTSTIISEVKQQFDLIKLQSVKLDGNNLKLGIYNGINTTVHL LLVITNGKQEIQLPIILSQGQNNFKIKISNVSGQLQIALYSPISASQVGLTLIPINSYGFLVAQYQVNLNKSTSSMGTYL LALVGILVVSAIIVIVMKRGHI
Sequences:
>Translated_902_residues MIKIAILAMGNLPKTAKAFLTLFFLLSLISCSFLIPTSQSISVNFTVSSNGMVSIYIGGIPWNNTVILHYGIENGPQQAW TNISNVVMKWNGQNFSATIGPFANGTWIGWVFYDNTTGQWINYDNHPFWNWNLEVNPPNVGQTYATVLQNGSILITAIGR APDQLDIHYGLTTGPQTGLPWGNITDELMTYNPLWGNYTIIIGPFKPGQWVQWVYHDLTLNQWYHNTSGQNFAIQDVYSF IQYINASYNRYVYVEGQPVSVIIYLQNTISQAINSSISIQIAGKLYNISSTLKPGYNLLSLTLDTSQIPQGIYYPQLSIY VNNTLQRQATLPQLYVLNTTGKKPLSLVIVWNMHQPLYVAPNGSWEQPWVWLHTGQDFYWDGSLVGAYELQALLIRQFNV SVTIDFTPVLLYQWETILHEKNYSFTSNFGIIPNHDISAVNYTINLYRQLINEGKVDVLTVPFYHPLQPLLLQDGYWSDV LAQIRMGENFTHEVFGVWANGTWTPEMAFDMDLVGLYNESNISYTILDQQAFLPYVTLVRGSLNPDQPFIVENNLGQTII VLFRNTTLSNEFGFKFFSQSPQLTAQELIQQLAEIYMNNPGGVVTVALDGENPLIFNPNTGPADLYAIYQALSEYQGQWL ITQTASEAIATHKPYSVITNLLVNSWDLNLNYWNNGYLGKTEIWQNVSLAREYLVAYTAAVGANISPLVYLPLNETPNST NLFDTLWNYLYVAEGSDWTWQTGPPAYGPLWFKEQALLYTSTIISEVKQQFDLIKLQSVKLDGNNLKLGIYNGINTTVHL LLVITNGKQEIQLPIILSQGQNNFKIKISNVSGQLQIALYSPISASQVGLTLIPINSYGFLVAQYQVNLNKSTSSMGTYL LALVGILVVSAIIVIVMKRGHI >Mature_902_residues MIKIAILAMGNLPKTAKAFLTLFFLLSLISCSFLIPTSQSISVNFTVSSNGMVSIYIGGIPWNNTVILHYGIENGPQQAW TNISNVVMKWNGQNFSATIGPFANGTWIGWVFYDNTTGQWINYDNHPFWNWNLEVNPPNVGQTYATVLQNGSILITAIGR APDQLDIHYGLTTGPQTGLPWGNITDELMTYNPLWGNYTIIIGPFKPGQWVQWVYHDLTLNQWYHNTSGQNFAIQDVYSF IQYINASYNRYVYVEGQPVSVIIYLQNTISQAINSSISIQIAGKLYNISSTLKPGYNLLSLTLDTSQIPQGIYYPQLSIY VNNTLQRQATLPQLYVLNTTGKKPLSLVIVWNMHQPLYVAPNGSWEQPWVWLHTGQDFYWDGSLVGAYELQALLIRQFNV SVTIDFTPVLLYQWETILHEKNYSFTSNFGIIPNHDISAVNYTINLYRQLINEGKVDVLTVPFYHPLQPLLLQDGYWSDV LAQIRMGENFTHEVFGVWANGTWTPEMAFDMDLVGLYNESNISYTILDQQAFLPYVTLVRGSLNPDQPFIVENNLGQTII VLFRNTTLSNEFGFKFFSQSPQLTAQELIQQLAEIYMNNPGGVVTVALDGENPLIFNPNTGPADLYAIYQALSEYQGQWL ITQTASEAIATHKPYSVITNLLVNSWDLNLNYWNNGYLGKTEIWQNVSLAREYLVAYTAAVGANISPLVYLPLNETPNST NLFDTLWNYLYVAEGSDWTWQTGPPAYGPLWFKEQALLYTSTIISEVKQQFDLIKLQSVKLDGNNLKLGIYNGINTTVHL LLVITNGKQEIQLPIILSQGQNNFKIKISNVSGQLQIALYSPISASQVGLTLIPINSYGFLVAQYQVNLNKSTSSMGTYL LALVGILVVSAIIVIVMKRGHI
Specific function: Unknown
COG id: COG1449
COG function: function code G; Alpha-amylase/alpha-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101482; Mature: 101482
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00146 BETA_LACTAMASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKIAILAMGNLPKTAKAFLTLFFLLSLISCSFLIPTSQSISVNFTVSSNGMVSIYIGGI CEEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEECCCCEEEEEECCC PWNNTVILHYGIENGPQQAWTNISNVVMKWNGQNFSATIGPFANGTWIGWVFYDNTTGQW CCCCEEEEEECCCCCHHHHHCCCCEEEEEECCCCEEEEECCCCCCCEEEEEEEECCCCCE INYDNHPFWNWNLEVNPPNVGQTYATVLQNGSILITAIGRAPDQLDIHYGLTTGPQTGLP EECCCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCCCC WGNITDELMTYNPLWGNYTIIIGPFKPGQWVQWVYHDLTLNQWYHNTSGQNFAIQDVYSF CCCCCHHHEEECCCCCCEEEEEECCCCCCHHEEEEEEEEEEHEEECCCCCCEEHHHHHHH IQYINASYNRYVYVEGQPVSVIIYLQNTISQAINSSISIQIAGKLYNISSTLKPGYNLLS HHHHCCCCCEEEEECCCCEEEEEEEEHHHHHHHCCCEEEEEEEEEEECCCCCCCCCEEEE LTLDTSQIPQGIYYPQLSIYVNNTLQRQATLPQLYVLNTTGKKPLSLVIVWNMHQPLYVA EEEEHHHCCCCEECCEEEEEECCCHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEC PNGSWEQPWVWLHTGQDFYWDGSLVGAYELQALLIRQFNVSVTIDFTPVLLYQWETILHE CCCCCCCCEEEEECCCCEEECCCEEEHHHHHEEEEEEECEEEEEEECEEEEEEHHHHHCC KNYSFTSNFGIIPNHDISAVNYTINLYRQLINEGKVDVLTVPFYHPLQPLLLQDGYWSDV CCCCEECCCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCHHEECCCCHHHH LAQIRMGENFTHEVFGVWANGTWTPEMAFDMDLVGLYNESNISYTILDQQAFLPYVTLVR HHHHHCCCCCCEEEEEEEECCEECCCEEECEEEEEEEECCCEEEEEECCCHHCCEEEEEE GSLNPDQPFIVENNLGQTIIVLFRNTTLSNEFGFKFFSQSPQLTAQELIQQLAEIYMNNP CCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCC GGVVTVALDGENPLIFNPNTGPADLYAIYQALSEYQGQWLITQTASEAIATHKPYSVITN CCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCHHHHHH LLVNSWDLNLNYWNNGYLGKTEIWQNVSLAREYLVAYTAAVGANISPLVYLPLNETPNST HHHCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC NLFDTLWNYLYVAEGSDWTWQTGPPAYGPLWFKEQALLYTSTIISEVKQQFDLIKLQSVK HHHHHHCCEEEEECCCCCEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCEEEEEEEE LDGNNLKLGIYNGINTTVHLLLVITNGKQEIQLPIILSQGQNNFKIKISNVSGQLQIALY ECCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEECCCEEEEEEE SPISASQVGLTLIPINSYGFLVAQYQVNLNKSTSSMGTYLLALVGILVVSAIIVIVMKRG CCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC HI CC >Mature Secondary Structure MIKIAILAMGNLPKTAKAFLTLFFLLSLISCSFLIPTSQSISVNFTVSSNGMVSIYIGGI CEEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEECCCCEEEEEECCC PWNNTVILHYGIENGPQQAWTNISNVVMKWNGQNFSATIGPFANGTWIGWVFYDNTTGQW CCCCEEEEEECCCCCHHHHHCCCCEEEEEECCCCEEEEECCCCCCCEEEEEEEECCCCCE INYDNHPFWNWNLEVNPPNVGQTYATVLQNGSILITAIGRAPDQLDIHYGLTTGPQTGLP EECCCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCCCC WGNITDELMTYNPLWGNYTIIIGPFKPGQWVQWVYHDLTLNQWYHNTSGQNFAIQDVYSF CCCCCHHHEEECCCCCCEEEEEECCCCCCHHEEEEEEEEEEHEEECCCCCCEEHHHHHHH IQYINASYNRYVYVEGQPVSVIIYLQNTISQAINSSISIQIAGKLYNISSTLKPGYNLLS HHHHCCCCCEEEEECCCCEEEEEEEEHHHHHHHCCCEEEEEEEEEEECCCCCCCCCEEEE LTLDTSQIPQGIYYPQLSIYVNNTLQRQATLPQLYVLNTTGKKPLSLVIVWNMHQPLYVA EEEEHHHCCCCEECCEEEEEECCCHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEC PNGSWEQPWVWLHTGQDFYWDGSLVGAYELQALLIRQFNVSVTIDFTPVLLYQWETILHE CCCCCCCCEEEEECCCCEEECCCEEEHHHHHEEEEEEECEEEEEEECEEEEEEHHHHHCC KNYSFTSNFGIIPNHDISAVNYTINLYRQLINEGKVDVLTVPFYHPLQPLLLQDGYWSDV CCCCEECCCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCHHEECCCCHHHH LAQIRMGENFTHEVFGVWANGTWTPEMAFDMDLVGLYNESNISYTILDQQAFLPYVTLVR HHHHHCCCCCCEEEEEEEECCEECCCEEECEEEEEEEECCCEEEEEECCCHHCCEEEEEE GSLNPDQPFIVENNLGQTIIVLFRNTTLSNEFGFKFFSQSPQLTAQELIQQLAEIYMNNP CCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCC GGVVTVALDGENPLIFNPNTGPADLYAIYQALSEYQGQWLITQTASEAIATHKPYSVITN CCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCHHHHHH LLVNSWDLNLNYWNNGYLGKTEIWQNVSLAREYLVAYTAAVGANISPLVYLPLNETPNST HHHCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC NLFDTLWNYLYVAEGSDWTWQTGPPAYGPLWFKEQALLYTSTIISEVKQQFDLIKLQSVK HHHHHHCCEEEEECCCCCEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCEEEEEEEE LDGNNLKLGIYNGINTTVHLLLVITNGKQEIQLPIILSQGQNNFKIKISNVSGQLQIALY ECCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEECCCEEEEEEE SPISASQVGLTLIPINSYGFLVAQYQVNLNKSTSSMGTYLLALVGILVVSAIIVIVMKRG CCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC HI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA