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The map label for this gene is garP [C]

Identifier: 15897965

GI number: 15897965

Start: 955002

End: 956138

Strand: Direct

Name: garP [C]

Synonym: SSO1103

Alternate gene names: 15897965

Gene position: 955002-956138 (Clockwise)

Preceding gene: 15897964

Following gene: 15897968

Centisome position: 31.92

GC content: 33.77

Gene sequence:

>1137_bases
GTGAAAGCGAAGAGAGTAATTTTTCTCTCAGCATCCTCATTTTTTCTCTCCTATTTTTCCAGAGTGACTTGGAGTATTGT
AGCGCCTCTTTCTACGTTAAAAACTACTACTACTGAAGATAGTATAATATTTGCACTTTTCTTCTTGGGCTATATTCTAG
TCCAAATTCCTTCTGGGATGTTAGCAGATCGTATTTCTGCAAATCACCTACTTTTCCTCTCTTTATTAGGTGTGGCAATT
ACGTCGTTTATCTCATCGACTTTTCCTCTCATTATGCTTGAATATGTCGCCAGTTTTCTAATGGGTTTTTCAGCTGGATG
GATTTATCCTATTACAGTAAAACTCTTGAGTGCATCCTTTGATAGCAGAGACTTACCGATTGCCATGAGTATTTACAGTA
TATCTTGGCCTTTATCCATCGTAGCTTCGGGAGTTATAATACCCTTTTTAGCTTTAACATTTGGTTGGGAGTTCTCGTTC
TATTTTATAACTGCACTTTCTATAATTTTAGGTATTTTAGCTCTCCTCTATCTTCCTTCCTTGAAGTTATCTAAAAGTAT
AATTAAATTTAAGGATGTGGTTAAGGATAAAAACTCCATATATATCTCAGTTGGAGGTTTTTTATTCTATTTAACATATT
GGATCCTTGTTCTATATCTTTACAAGTATTTACTTAGTGTAGTCGGAAACGAATACACGGCGGGTATCATTTACTCATTC
ACTGCATTAACTGGAATTTTCTCTACTATTCTAGCTGGTTATATAATAAAATCTTTAGGTGTTAAAAGGACTTTTCTATC
GTTTATTACTCTCTATAGTTTTTCGTTACTCCTTTTTTCGTTTTCAAAAAATGTGATAGTTATTGGTATTGACGCATTAG
CCTTAGGTTTCTTTAGGTTCGTTATAACGCCAACAAGCTCTACAGCAGTTGCTGTAATCGGAGGAAAAGAAAGGAGTGGT
AGTGTAACTGGCCTTGCTAACTTCTTTTGGCAATTTAGCGGTATAGTTGGGTCCATAATTGCTCCTCTTCTAATAAACTT
ATTTACTTATACATATTTGTGGACTTTTGTTAGCGTGTTTTCTTTTCTTTCTTTAATTTTTTACTATAAACTTAAATTTA
TGAGAGATTATCTTTAA

Upstream 100 bases:

>100_bases
TCGAGAATAATTAATAAGGAGAAAATAGATCCAATGCTGTTCTGTCTAGTTTGTAGTAAGTCACGAAGGTTATTTAACTT
ACCAGTATGTTTTTAAAACT

Downstream 100 bases:

>100_bases
GATCTAAGCTCATTCGTTCCACTTCTGCGGAGGAAAGCGTATCAAGTATCTTTCTCATATAAGCTTTCACAAAATAGTAT
ATCTTATATTTTCGAAATAT

Product: transport membrane protein (permease)

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Transport Membrane Protein Related Protein; Transport Membrane Protein; Facilitator Superfamily Permease

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MKAKRVIFLSASSFFLSYFSRVTWSIVAPLSTLKTTTTEDSIIFALFFLGYILVQIPSGMLADRISANHLLFLSLLGVAI
TSFISSTFPLIMLEYVASFLMGFSAGWIYPITVKLLSASFDSRDLPIAMSIYSISWPLSIVASGVIIPFLALTFGWEFSF
YFITALSIILGILALLYLPSLKLSKSIIKFKDVVKDKNSIYISVGGFLFYLTYWILVLYLYKYLLSVVGNEYTAGIIYSF
TALTGIFSTILAGYIIKSLGVKRTFLSFITLYSFSLLLFSFSKNVIVIGIDALALGFFRFVITPTSSTAVAVIGGKERSG
SVTGLANFFWQFSGIVGSIIAPLLINLFTYTYLWTFVSVFSFLSLIFYYKLKFMRDYL

Sequences:

>Translated_378_residues
MKAKRVIFLSASSFFLSYFSRVTWSIVAPLSTLKTTTTEDSIIFALFFLGYILVQIPSGMLADRISANHLLFLSLLGVAI
TSFISSTFPLIMLEYVASFLMGFSAGWIYPITVKLLSASFDSRDLPIAMSIYSISWPLSIVASGVIIPFLALTFGWEFSF
YFITALSIILGILALLYLPSLKLSKSIIKFKDVVKDKNSIYISVGGFLFYLTYWILVLYLYKYLLSVVGNEYTAGIIYSF
TALTGIFSTILAGYIIKSLGVKRTFLSFITLYSFSLLLFSFSKNVIVIGIDALALGFFRFVITPTSSTAVAVIGGKERSG
SVTGLANFFWQFSGIVGSIIAPLLINLFTYTYLWTFVSVFSFLSLIFYYKLKFMRDYL
>Mature_378_residues
MKAKRVIFLSASSFFLSYFSRVTWSIVAPLSTLKTTTTEDSIIFALFFLGYILVQIPSGMLADRISANHLLFLSLLGVAI
TSFISSTFPLIMLEYVASFLMGFSAGWIYPITVKLLSASFDSRDLPIAMSIYSISWPLSIVASGVIIPFLALTFGWEFSF
YFITALSIILGILALLYLPSLKLSKSIIKFKDVVKDKNSIYISVGGFLFYLTYWILVLYLYKYLLSVVGNEYTAGIIYSF
TALTGIFSTILAGYIIKSLGVKRTFLSFITLYSFSLLLFSFSKNVIVIGIDALALGFFRFVITPTSSTAVAVIGGKERSG
SVTGLANFFWQFSGIVGSIIAPLLINLFTYTYLWTFVSVFSFLSLIFYYKLKFMRDYL

Specific function: Uptake Of D-Galactarate. [C]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42237; Mature: 42237

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKRVIFLSASSFFLSYFSRVTWSIVAPLSTLKTTTTEDSIIFALFFLGYILVQIPSGM
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCH
LADRISANHLLFLSLLGVAITSFISSTFPLIMLEYVASFLMGFSAGWIYPITVKLLSASF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
DSRDLPIAMSIYSISWPLSIVASGVIIPFLALTFGWEFSFYFITALSIILGILALLYLPS
CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
LKLSKSIIKFKDVVKDKNSIYISVGGFLFYLTYWILVLYLYKYLLSVVGNEYTAGIIYSF
HHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TALTGIFSTILAGYIIKSLGVKRTFLSFITLYSFSLLLFSFSKNVIVIGIDALALGFFRF
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
VITPTSSTAVAVIGGKERSGSVTGLANFFWQFSGIVGSIIAPLLINLFTYTYLWTFVSVF
HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFLSLIFYYKLKFMRDYL
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKAKRVIFLSASSFFLSYFSRVTWSIVAPLSTLKTTTTEDSIIFALFFLGYILVQIPSGM
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCH
LADRISANHLLFLSLLGVAITSFISSTFPLIMLEYVASFLMGFSAGWIYPITVKLLSASF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
DSRDLPIAMSIYSISWPLSIVASGVIIPFLALTFGWEFSFYFITALSIILGILALLYLPS
CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
LKLSKSIIKFKDVVKDKNSIYISVGGFLFYLTYWILVLYLYKYLLSVVGNEYTAGIIYSF
HHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TALTGIFSTILAGYIIKSLGVKRTFLSFITLYSFSLLLFSFSKNVIVIGIDALALGFFRF
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
VITPTSSTAVAVIGGKERSGSVTGLANFFWQFSGIVGSIIAPLLINLFTYTYLWTFVSVF
HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFLSLIFYYKLKFMRDYL
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA