Click here to switch to the map view.

The map label for this gene is ybeC [H]

Identifier: 15897937

GI number: 15897937

Start: 925904

End: 927847

Strand: Direct

Name: ybeC [H]

Synonym: SSO1069

Alternate gene names: 15897937

Gene position: 925904-927847 (Clockwise)

Preceding gene: 15897936

Following gene: 15897941

Centisome position: 30.94

GC content: 36.11

Gene sequence:

>1944_bases
ATGGGTGAAAGAGAAGCCAAAGGAGCAAGAGATTTAGGTATTTCTTCAGATAAACAATTAAGGAGAAGCTTAGGAAAATT
TGAGCTATTATACCTCTCATTAGGAGGAATTATAGGATCTGGATGGTTATTTGCATCTTTAAGTACAGCAGCTTATGCTG
GCGGTGCAGCTATATTGAGCTGGATAATTGCTGGAATTTTAGTAATGTTTGTGGGTTTAGCTTATGCTGAAATAGGTGCA
GCAATTCCAAAAAGTGGTGGAATAACAAGATATCCGCATTATACTCACGGAGGGCTAGTAGGGTATATAATTACTTGGGC
TTATTTCCTTTCCGCTGCATCAGTGCCAGCTATTGAGGCAGCAGCAGCAATAGAATATATAGGATCTTATTACCCTCAGC
TAATAACTTCTGGAACTTTTGATGGAACTACCGTAACAATTTTGACACCATTAGGCATAGGATTAGCTGGTCTATTGTTA
ATTTTCTTCTTCTTTTTAAATTACTTCGGAGTTAACATTTTAGGAAAAGTGACTCATGGTGCAGGTTGGTGGAAATTATT
GGTGCCAACAATAACTTTTTTAGCATTATTAGCGTTGGACCTGCACTCAGCTAACTTTACATTAGGTGGAGGTTTCTTCC
CATCTGCACAATATGTAAAAGGAGGTTCCTCTGGAATTTATGGTTTTAGTGCAGTTCTCTTTGCTATTCCTTCTACCGGA
GTAATTTTCGCTTATCTAGGATTTAGACAAGCAGTAGAATATGGGGGTGAAGGTAAAAATCCCAGTAAAGATATACCATT
TGCGGTGTTAGGTTCATTACTTATAGCTATTGCGTTATATACGTTACTTCAAGTTAGCTTTATAGGAGGAATAGATTGGA
GCAAATTATATCTTGTTAATAAGACTACTGGTATATTAATCCCCGTTGTACCAGGGAATTGGTCAGCATTAAGTACAGCA
GTCACAGCATCTAACGTCTCAATATCTTCTGGCCCATTCTTAGTTCTAACTCAGATTGCCCCAGTCTCTGGTCTAGCTGC
AGCGTTTTTCACGGCTTTAGCGGTTTTATTAACTATTGATGCTGTAGTTTCACCATCCGGAACTGGATGGATTTATACTG
GAACTTCAACTAGAACACTATACGCATTTGCTAGTAATGGTTATTTACCAGAAATTTTCTTAAAGATTGGAAAGACTAAA
ATACCAACTTATTCACTAATTGCAGCATTAATAGTAGGTTTCATATTCTTACTACCATTTCCATCGTGGTATGCTTTAGT
AGGTTTCATATCTTCAGCGACAGTATTAACTTACATTATGGGCGGAATTGGATTAGCAGTCTTAAGAAAACACGCTAAGG
AATTAAATAGACCATTTAGAGTACCCGCATCAGTAATAATTGCACCAATAGCAACACTAGCAGCTGGTTTAATAGTTTAC
TGGTCAAGTTTTGCTATTCTCTTTTACGTATTTACTGGAATATTCTTAGGTCTTCCATTATTCTTTATATTCTATTCCAA
TAGAATATTAGGGATAAATAAGGCATATTCAATAGTTGTTGGCGTTATTAACTTAGTAATAGATCTAGTAATGGCATTCT
TGTTATTTGATGAGACTAGCGGACTTGGTGCTGCTAACAATCTCTTCTTCGGAATTTATATAGTAGTTATTGCAGCTATG
CTAATTGGCGATATGTTATTCTTGCTGAAAACTGTACCTCCAGATGTTAAGAGAGAAATTAATGCCGGATGGTGGTTAAT
TTACTTTATCTTAGCAATTTACATAATATCATATTTTGGAGGATTTGGGCTATATACTATAATACCATTTCCATATGATA
CTATAGTTGCTGCTATTGTAATACTCATTGGATACTTCTGGGCTATAAGAAGTGGTTTCAGAACTCAAGCAATTCAAGAT
ATAATTCAGGCAACTAGAGAATAA

Upstream 100 bases:

>100_bases
ACATTATATTTTACTTTGAGCTCTTTTTAAGTTTAAAACTAAATAGTCTGTTGTACTTGGTACATGAAAATTTATAAAGT
ATATAAGTGTATATACTTCT

Downstream 100 bases:

>100_bases
AGTAGTTAGATAATCAAGCAGTATAAAATATTTTTTAAGTTATAATTCTTTATTTATTTTTAAATTATAGGGGCGTTCAG
TAATAAATCTTTCGGTCGAA

Product: amino acid transporter

Products: Proton [Cytoplasm]; L-lysine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 647; Mature: 646

Protein sequence:

>647_residues
MGEREAKGARDLGISSDKQLRRSLGKFELLYLSLGGIIGSGWLFASLSTAAYAGGAAILSWIIAGILVMFVGLAYAEIGA
AIPKSGGITRYPHYTHGGLVGYIITWAYFLSAASVPAIEAAAAIEYIGSYYPQLITSGTFDGTTVTILTPLGIGLAGLLL
IFFFFLNYFGVNILGKVTHGAGWWKLLVPTITFLALLALDLHSANFTLGGGFFPSAQYVKGGSSGIYGFSAVLFAIPSTG
VIFAYLGFRQAVEYGGEGKNPSKDIPFAVLGSLLIAIALYTLLQVSFIGGIDWSKLYLVNKTTGILIPVVPGNWSALSTA
VTASNVSISSGPFLVLTQIAPVSGLAAAFFTALAVLLTIDAVVSPSGTGWIYTGTSTRTLYAFASNGYLPEIFLKIGKTK
IPTYSLIAALIVGFIFLLPFPSWYALVGFISSATVLTYIMGGIGLAVLRKHAKELNRPFRVPASVIIAPIATLAAGLIVY
WSSFAILFYVFTGIFLGLPLFFIFYSNRILGINKAYSIVVGVINLVIDLVMAFLLFDETSGLGAANNLFFGIYIVVIAAM
LIGDMLFLLKTVPPDVKREINAGWWLIYFILAIYIISYFGGFGLYTIIPFPYDTIVAAIVILIGYFWAIRSGFRTQAIQD
IIQATRE

Sequences:

>Translated_647_residues
MGEREAKGARDLGISSDKQLRRSLGKFELLYLSLGGIIGSGWLFASLSTAAYAGGAAILSWIIAGILVMFVGLAYAEIGA
AIPKSGGITRYPHYTHGGLVGYIITWAYFLSAASVPAIEAAAAIEYIGSYYPQLITSGTFDGTTVTILTPLGIGLAGLLL
IFFFFLNYFGVNILGKVTHGAGWWKLLVPTITFLALLALDLHSANFTLGGGFFPSAQYVKGGSSGIYGFSAVLFAIPSTG
VIFAYLGFRQAVEYGGEGKNPSKDIPFAVLGSLLIAIALYTLLQVSFIGGIDWSKLYLVNKTTGILIPVVPGNWSALSTA
VTASNVSISSGPFLVLTQIAPVSGLAAAFFTALAVLLTIDAVVSPSGTGWIYTGTSTRTLYAFASNGYLPEIFLKIGKTK
IPTYSLIAALIVGFIFLLPFPSWYALVGFISSATVLTYIMGGIGLAVLRKHAKELNRPFRVPASVIIAPIATLAAGLIVY
WSSFAILFYVFTGIFLGLPLFFIFYSNRILGINKAYSIVVGVINLVIDLVMAFLLFDETSGLGAANNLFFGIYIVVIAAM
LIGDMLFLLKTVPPDVKREINAGWWLIYFILAIYIISYFGGFGLYTIIPFPYDTIVAAIVILIGYFWAIRSGFRTQAIQD
IIQATRE
>Mature_646_residues
GEREAKGARDLGISSDKQLRRSLGKFELLYLSLGGIIGSGWLFASLSTAAYAGGAAILSWIIAGILVMFVGLAYAEIGAA
IPKSGGITRYPHYTHGGLVGYIITWAYFLSAASVPAIEAAAAIEYIGSYYPQLITSGTFDGTTVTILTPLGIGLAGLLLI
FFFFLNYFGVNILGKVTHGAGWWKLLVPTITFLALLALDLHSANFTLGGGFFPSAQYVKGGSSGIYGFSAVLFAIPSTGV
IFAYLGFRQAVEYGGEGKNPSKDIPFAVLGSLLIAIALYTLLQVSFIGGIDWSKLYLVNKTTGILIPVVPGNWSALSTAV
TASNVSISSGPFLVLTQIAPVSGLAAAFFTALAVLLTIDAVVSPSGTGWIYTGTSTRTLYAFASNGYLPEIFLKIGKTKI
PTYSLIAALIVGFIFLLPFPSWYALVGFISSATVLTYIMGGIGLAVLRKHAKELNRPFRVPASVIIAPIATLAAGLIVYW
SSFAILFYVFTGIFLGLPLFFIFYSNRILGINKAYSIVVGVINLVIDLVMAFLLFDETSGLGAANNLFFGIYIVVIAAML
IGDMLFLLKTVPPDVKREINAGWWLIYFILAIYIISYFGGFGLYTIIPFPYDTIVAAIVILIGYFWAIRSGFRTQAIQDI
IQATRE

Specific function: Uptake of an yet unknown amino-acid with the concomitant import of a proton [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family [H]

Homologues:

Organism=Homo sapiens, GI187423910, Length=487, Percent_Identity=24.0246406570842, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI7657591, Length=487, Percent_Identity=24.0246406570842, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI258614003, Length=313, Percent_Identity=25.5591054313099, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI258645169, Length=313, Percent_Identity=25.5591054313099, Blast_Score=67, Evalue=6e-11,
Organism=Homo sapiens, GI258614005, Length=313, Percent_Identity=25.5591054313099, Blast_Score=67, Evalue=7e-11,
Organism=Homo sapiens, GI181337167, Length=276, Percent_Identity=26.8115942028986, Blast_Score=66, Evalue=9e-11,
Organism=Escherichia coli, GI1788480, Length=401, Percent_Identity=28.6783042394015, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1786302, Length=468, Percent_Identity=20.9401709401709, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17533459, Length=472, Percent_Identity=24.1525423728814, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=271, Percent_Identity=27.3062730627306, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24666159, Length=284, Percent_Identity=29.5774647887324, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI221512776, Length=288, Percent_Identity=29.5138888888889, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24667468, Length=460, Percent_Identity=25.4347826086956, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI45550968, Length=447, Percent_Identity=24.8322147651007, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI19921172, Length=447, Percent_Identity=24.8322147651007, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 69311; Mature: 69179

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEREAKGARDLGISSDKQLRRSLGKFELLYLSLGGIIGSGWLFASLSTAAYAGGAAILS
CCCCCCCCCCCCCCCCHHHHHHHHCCCEEHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHH
WIIAGILVMFVGLAYAEIGAAIPKSGGITRYPHYTHGGLVGYIITWAYFLSAASVPAIEA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH
AAAIEYIGSYYPQLITSGTFDGTTVTILTPLGIGLAGLLLIFFFFLNYFGVNILGKVTHG
HHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCC
AGWWKLLVPTITFLALLALDLHSANFTLGGGFFPSAQYVKGGSSGIYGFSAVLFAIPSTG
CCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCC
VIFAYLGFRQAVEYGGEGKNPSKDIPFAVLGSLLIAIALYTLLQVSFIGGIDWSKLYLVN
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
KTTGILIPVVPGNWSALSTAVTASNVSISSGPFLVLTQIAPVSGLAAAFFTALAVLLTID
CCCCEEEEECCCCCHHHHHHHHHCCCEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
AVVSPSGTGWIYTGTSTRTLYAFASNGYLPEIFLKIGKTKIPTYSLIAALIVGFIFLLPF
HHCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
PSWYALVGFISSATVLTYIMGGIGLAVLRKHAKELNRPFRVPASVIIAPIATLAAGLIVY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
WSSFAILFYVFTGIFLGLPLFFIFYSNRILGINKAYSIVVGVINLVIDLVMAFLLFDETS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GLGAANNLFFGIYIVVIAAMLIGDMLFLLKTVPPDVKREINAGWWLIYFILAIYIISYFG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
GFGLYTIIPFPYDTIVAAIVILIGYFWAIRSGFRTQAIQDIIQATRE
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GEREAKGARDLGISSDKQLRRSLGKFELLYLSLGGIIGSGWLFASLSTAAYAGGAAILS
CCCCCCCCCCCCCCCHHHHHHHHCCCEEHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHH
WIIAGILVMFVGLAYAEIGAAIPKSGGITRYPHYTHGGLVGYIITWAYFLSAASVPAIEA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH
AAAIEYIGSYYPQLITSGTFDGTTVTILTPLGIGLAGLLLIFFFFLNYFGVNILGKVTHG
HHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCC
AGWWKLLVPTITFLALLALDLHSANFTLGGGFFPSAQYVKGGSSGIYGFSAVLFAIPSTG
CCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCC
VIFAYLGFRQAVEYGGEGKNPSKDIPFAVLGSLLIAIALYTLLQVSFIGGIDWSKLYLVN
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
KTTGILIPVVPGNWSALSTAVTASNVSISSGPFLVLTQIAPVSGLAAAFFTALAVLLTID
CCCCEEEEECCCCCHHHHHHHHHCCCEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
AVVSPSGTGWIYTGTSTRTLYAFASNGYLPEIFLKIGKTKIPTYSLIAALIVGFIFLLPF
HHCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
PSWYALVGFISSATVLTYIMGGIGLAVLRKHAKELNRPFRVPASVIIAPIATLAAGLIVY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
WSSFAILFYVFTGIFLGLPLFFIFYSNRILGINKAYSIVVGVINLVIDLVMAFLLFDETS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GLGAANNLFFGIYIVVIAAMLIGDMLFLLKTVPPDVKREINAGWWLIYFILAIYIISYFG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
GFGLYTIIPFPYDTIVAAIVILIGYFWAIRSGFRTQAIQDIIQATRE
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-lysine [Periplasm] [C]

Specific reaction: Proton [Periplasm] + L-lysine [Periplasm] = Proton [Cytoplasm] + L-lysine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12730183 [H]