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The map label for this gene is 15897913

Identifier: 15897913

GI number: 15897913

Start: 904866

End: 905645

Strand: Direct

Name: 15897913

Synonym: SSO1046

Alternate gene names: NA

Gene position: 904866-905645 (Clockwise)

Preceding gene: 15897909

Following gene: 15897914

Centisome position: 30.24

GC content: 35.0

Gene sequence:

>780_bases
GTGAAAAGAGATATGTACTATGTTTTTATACTTGGAACTGCGGGATCAGGAAAGACAACCTTGACAAAAAATTTACAAGA
TTATTTACTTGATCAAGAGATGGATACGGCAGTAATAAACTTGGATCCAGCGGTTGAACACTTACCTTATACCCCCGATT
TTGATGTTAGAGATTATGTTGACGCATATGAGGTGATGCAAAACTATCATTTAGGGCCTAATTCTAGTTTAATAGCATCT
ATTGATTTAATTTTGACTAAGGCGTCTGAGATCAAATCGGAAATCGATCAAATTGAAGCTAATTATGTACTAGTTGATAC
ACCTGGACAAATAGAGCTATTTGCGTATAGGGATACTGGTAGGCTAATTTCCCAGTTAATTAGAGGAAATAATAAGGCAT
TGGGACTATTTCTTCTAGACTCTTTTTTAGCTAAGGAAGCTAGAAGTTTTATATCCTTATTACTTCTTTCAAGTTCCATA
AAATTTAGGTTGGACTTACCGATTATCAATATACTTAATAAGATAGATCTTCTGACAGAAAAGGAGTTAGAGCAGATATT
GGCGTGGGGAGATAATGCTGAGAATTTGATTGACGAGTTGGGTAGGTTAGATGAGTATTCCCTTGAGCTAGTTAATTTAT
TAATAGAAAGCTTGTCTTATAACCTAATTCCCATGTCATCAGAAGAGGGCAAGGGATTTAACGAACTCTACGCTGAAATT
CAAAGAGTAATAGCTGGTGGTGAGGATTATTTAACTGAAGAGTCTAATCCTAAGTTATAA

Upstream 100 bases:

>100_bases
ATATTTTTGATAAGCTTTCGTCTATTCCATTAGTGGCTGATCCACCTATTATTATCATTATTATCATCTTTAAGGGGAAG
TTTTTAAGATTAAAAGCTGA

Downstream 100 bases:

>100_bases
GCTTTATTAGTCCTATAGACTAAATTAAATAGATGATGAAAGCTAAGGTAATTGACGCTGTCTCATTCTCTTATATATTA
AGAACTGTGGGTGACTTCTT

Product: GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKRDMYYVFILGTAGSGKTTLTKNLQDYLLDQEMDTAVINLDPAVEHLPYTPDFDVRDYVDAYEVMQNYHLGPNSSLIAS
IDLILTKASEIKSEIDQIEANYVLVDTPGQIELFAYRDTGRLISQLIRGNNKALGLFLLDSFLAKEARSFISLLLLSSSI
KFRLDLPIINILNKIDLLTEKELEQILAWGDNAENLIDELGRLDEYSLELVNLLIESLSYNLIPMSSEEGKGFNELYAEI
QRVIAGGEDYLTEESNPKL

Sequences:

>Translated_259_residues
MKRDMYYVFILGTAGSGKTTLTKNLQDYLLDQEMDTAVINLDPAVEHLPYTPDFDVRDYVDAYEVMQNYHLGPNSSLIAS
IDLILTKASEIKSEIDQIEANYVLVDTPGQIELFAYRDTGRLISQLIRGNNKALGLFLLDSFLAKEARSFISLLLLSSSI
KFRLDLPIINILNKIDLLTEKELEQILAWGDNAENLIDELGRLDEYSLELVNLLIESLSYNLIPMSSEEGKGFNELYAEI
QRVIAGGEDYLTEESNPKL
>Mature_259_residues
MKRDMYYVFILGTAGSGKTTLTKNLQDYLLDQEMDTAVINLDPAVEHLPYTPDFDVRDYVDAYEVMQNYHLGPNSSLIAS
IDLILTKASEIKSEIDQIEANYVLVDTPGQIELFAYRDTGRLISQLIRGNNKALGLFLLDSFLAKEARSFISLLLLSSSI
KFRLDLPIINILNKIDLLTEKELEQILAWGDNAENLIDELGRLDEYSLELVNLLIESLSYNLIPMSSEEGKGFNELYAEI
QRVIAGGEDYLTEESNPKL

Specific function: Unknown

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI223005897, Length=245, Percent_Identity=31.0204081632653, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI223005899, Length=230, Percent_Identity=29.1304347826087, Blast_Score=118, Evalue=5e-27,
Organism=Homo sapiens, GI256818742, Length=184, Percent_Identity=32.0652173913043, Blast_Score=109, Evalue=2e-24,
Organism=Homo sapiens, GI88759337, Length=170, Percent_Identity=33.5294117647059, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI283046688, Length=194, Percent_Identity=30.4123711340206, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI256818744, Length=152, Percent_Identity=33.5526315789474, Blast_Score=95, Evalue=5e-20,
Organism=Homo sapiens, GI223005901, Length=182, Percent_Identity=26.3736263736264, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI223005903, Length=146, Percent_Identity=26.027397260274, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17552462, Length=248, Percent_Identity=31.4516129032258, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17556506, Length=273, Percent_Identity=26.007326007326, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI25141394, Length=179, Percent_Identity=30.1675977653631, Blast_Score=98, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6322532, Length=266, Percent_Identity=28.9473684210526, Blast_Score=125, Evalue=8e-30,
Organism=Saccharomyces cerevisiae, GI6324836, Length=181, Percent_Identity=33.1491712707182, Blast_Score=98, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6323272, Length=188, Percent_Identity=30.8510638297872, Blast_Score=91, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21358191, Length=262, Percent_Identity=31.6793893129771, Blast_Score=124, Evalue=7e-29,
Organism=Drosophila melanogaster, GI18543199, Length=241, Percent_Identity=29.4605809128631, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI45550609, Length=181, Percent_Identity=30.939226519337, Blast_Score=96, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29254; Mature: 29254

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDMYYVFILGTAGSGKTTLTKNLQDYLLDQEMDTAVINLDPAVEHLPYTPDFDVRDYV
CCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHCCCCCCCCHHHHH
DAYEVMQNYHLGPNSSLIASIDLILTKASEIKSEIDQIEANYVLVDTPGQIELFAYRDTG
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCHH
RLISQLIRGNNKALGLFLLDSFLAKEARSFISLLLLSSSIKFRLDLPIINILNKIDLLTE
HHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH
KELEQILAWGDNAENLIDELGRLDEYSLELVNLLIESLSYNLIPMSSEEGKGFNELYAEI
HHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHH
QRVIAGGEDYLTEESNPKL
HHHHHCCHHHCCCCCCCCC
>Mature Secondary Structure
MKRDMYYVFILGTAGSGKTTLTKNLQDYLLDQEMDTAVINLDPAVEHLPYTPDFDVRDYV
CCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHCCCCCCCCHHHHH
DAYEVMQNYHLGPNSSLIASIDLILTKASEIKSEIDQIEANYVLVDTPGQIELFAYRDTG
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCHH
RLISQLIRGNNKALGLFLLDSFLAKEARSFISLLLLSSSIKFRLDLPIINILNKIDLLTE
HHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH
KELEQILAWGDNAENLIDELGRLDEYSLELVNLLIESLSYNLIPMSSEEGKGFNELYAEI
HHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHH
QRVIAGGEDYLTEESNPKL
HHHHHCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA