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The map label for this gene is 15897901

Identifier: 15897901

GI number: 15897901

Start: 892443

End: 894620

Strand: Direct

Name: 15897901

Synonym: SSO1033

Alternate gene names: NA

Gene position: 892443-894620 (Clockwise)

Preceding gene: 15897900

Following gene: 15897908

Centisome position: 29.83

GC content: 36.27

Gene sequence:

>2178_bases
ATGAAGTATGGTAATATGAAAAAATGGGCGCCATTAATATTATTTCTATTTTCTCTATTATTATTACAAGGAATATCTCT
TCATGCCTCTTCACCGTCATTTTCCGTGAATGCAAGTTATTTAGCATCATTGCCTTACGCAAATTCTCATGTCGCAGTAG
TATACTATCAAGGTAGCTTATATATCATAGGTGGGGATTCACATTCAAACCAAGTTTGGATATACTCCAATGGCACATGG
AATATCGGGCCTAGTTTGCCTTTTAGTTTAGTTTCACCTTCAGCAATCGTCTATAATAACACAATTTATGTTATGGGTGG
TTATAATAGCACTGGGATAAATCCTTACGTTCTTAAACTTAATGGTAATTCTTGGGTTGTCGTAAGTGAAATGCCACTCC
CAGCATACTCACCTTACATATTTGTTTATAATAATGCGATTTACGTTATTGGTGGAGAGAACACCACTAGCCCAGCTGGC
CTTTATTTTCCACCTTCTAATGCAATTAGATTATTCTACCCCAATAACGATAGTTGGAGGATAATAGGTTACATGCCAGT
TCCTACATATGGAGGTGGGTATGTATTTAATGGGACTTCCTTGATAATAGTTAGCGGTTACATTGGATATAGTGCCTATA
CCAATGACATATTGATTTATAGTCCACAAAACAATAATTGGACTATTCTTAATGGCGTTCTTCCCTACTGGATTCACGAT
AGTGCCTTAGCCTATTATAGGGGTGTTTTGTTTATTGTGGGTGGTTATATTTATACTGCAGGTTCTGGTGGGGTTAATAA
CGCAATCCTTGCCTACTATAATGGTAATTTGCAAAGAGTTGGATATCTTCCCGTCCCAGTATATTCTGCTGGTTATGTAC
AAGTAGGAAATATGTTGTATCTTGCTGGAGGCATTGGTAGTTCATTAAGTGATGTCTCTGCTTTACAGCTAATCACGTTT
AACTTCCCACCTCTTCCCCCTAAGATAACCTCTTATTCTGCAGGAAATGAATCCGTTACCTTAGGCTGGAATCCAGTTAG
ACTATCTAGTGGTTATGAGATAATATATTGGAATAACATGGGATTCAACAGCTCAATTAATGTAGGTAACGTTACTAGTT
ACACTGTAACTGGTTTGAAAGATGGTATAACATACTACTTTGAGGTTTTAGCTTATAATTCAATTGGCTATTCTTCTCCC
TCAAGTATAATCGCGTTAACTCCAGCTTCAGTTCCTAACCCTCCACAACTCGTTTCTGTGAAGTACGGTAATGATAATGT
TACATTGAATTGGTTGCCTCCAACTTTTTCTGGAGGCTATCTTTTACTAGGTTATTACGTTATTGTTAAGAACGAGAATT
CGATGGTTAGCTCACATTTCGTTAATAGTACTAGTTTGACAATAAGTAATCTGACACCAAACGTGACTTATAACGTTTTC
ATTTACGCTGTAAATAAGCTTGGTAATAGCTCTCCCCTAGTACTTACCGTTGTTCCAATTACCAAGGCTAGTGTTTTTGC
ATTTATAACTAAACTGGGAAATGGAATTTTAGTCAATTGGACTACTTCTTTCCCAGCTAATATAACTTTGGAACTGTATA
ATCCTAATGGTAACTTAATTTCTCAGATTGCAGCTATAAAGGGTAATAGTAGCTATTTGTTTAGAGTACCTCAAGGTAAT
TATACGCTAGTAATAATAGCTTCAAACTCAGCTGGGGTTTCTAAATACGTTTATCAAGTAGTTTACTATTTACCACCAGC
CTCTCCGCAAGTCTCGCTTATCGGATTTGGAAATAATCTGTACATTAGTTGGAATAATGAAGCGAATGTAATCACATATC
TCGTTTACGTTAATAATAGTCTGGTTTATGAGGGACCAAGTAATAGCATTGTGACTAATATTAGTAATGGTACTTATTTA
GTAAAGGTTATCGGTGTGAATCCAGCTGGCTCTTCATCTCCTGGCATTGCTGTAATTCACTATACCGGTGATTACGTCAC
TGTGGTTAAGATGAAGGTTGTTAATGTTACTATTGTCAGTAAGATCGCTTCGGCAGTATCAGGTAATGGCAATAATTTAA
GTTTAGGTCAAAGTATTGTTATCATATTACTGGCTGTAATGATTTTGTTGAGTATTGCTATTATTACGAGAAATAGGAGC
AATGGATTTGATTGGTAA

Upstream 100 bases:

>100_bases
CAGCTACGCTTCTCCTTTTCTCCCTCATACTAATAGTTACAAGTAGGATAGTTAACCATTTCTTGTATAAGACATGAAAA
TCCTTTTAAATTATTAAGTA

Downstream 100 bases:

>100_bases
ATAATAGGGTTAACAAGGTTTGAACCCGGGATCACCAGCGTTATAGAAGAATCTTTATAACATCGTAAATTAGTTGCCAT
CTTACGGCAATACCTTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 725; Mature: 725

Protein sequence:

>725_residues
MKYGNMKKWAPLILFLFSLLLLQGISLHASSPSFSVNASYLASLPYANSHVAVVYYQGSLYIIGGDSHSNQVWIYSNGTW
NIGPSLPFSLVSPSAIVYNNTIYVMGGYNSTGINPYVLKLNGNSWVVVSEMPLPAYSPYIFVYNNAIYVIGGENTTSPAG
LYFPPSNAIRLFYPNNDSWRIIGYMPVPTYGGGYVFNGTSLIIVSGYIGYSAYTNDILIYSPQNNNWTILNGVLPYWIHD
SALAYYRGVLFIVGGYIYTAGSGGVNNAILAYYNGNLQRVGYLPVPVYSAGYVQVGNMLYLAGGIGSSLSDVSALQLITF
NFPPLPPKITSYSAGNESVTLGWNPVRLSSGYEIIYWNNMGFNSSINVGNVTSYTVTGLKDGITYYFEVLAYNSIGYSSP
SSIIALTPASVPNPPQLVSVKYGNDNVTLNWLPPTFSGGYLLLGYYVIVKNENSMVSSHFVNSTSLTISNLTPNVTYNVF
IYAVNKLGNSSPLVLTVVPITKASVFAFITKLGNGILVNWTTSFPANITLELYNPNGNLISQIAAIKGNSSYLFRVPQGN
YTLVIIASNSAGVSKYVYQVVYYLPPASPQVSLIGFGNNLYISWNNEANVITYLVYVNNSLVYEGPSNSIVTNISNGTYL
VKVIGVNPAGSSSPGIAVIHYTGDYVTVVKMKVVNVTIVSKIASAVSGNGNNLSLGQSIVIILLAVMILLSIAIITRNRS
NGFDW

Sequences:

>Translated_725_residues
MKYGNMKKWAPLILFLFSLLLLQGISLHASSPSFSVNASYLASLPYANSHVAVVYYQGSLYIIGGDSHSNQVWIYSNGTW
NIGPSLPFSLVSPSAIVYNNTIYVMGGYNSTGINPYVLKLNGNSWVVVSEMPLPAYSPYIFVYNNAIYVIGGENTTSPAG
LYFPPSNAIRLFYPNNDSWRIIGYMPVPTYGGGYVFNGTSLIIVSGYIGYSAYTNDILIYSPQNNNWTILNGVLPYWIHD
SALAYYRGVLFIVGGYIYTAGSGGVNNAILAYYNGNLQRVGYLPVPVYSAGYVQVGNMLYLAGGIGSSLSDVSALQLITF
NFPPLPPKITSYSAGNESVTLGWNPVRLSSGYEIIYWNNMGFNSSINVGNVTSYTVTGLKDGITYYFEVLAYNSIGYSSP
SSIIALTPASVPNPPQLVSVKYGNDNVTLNWLPPTFSGGYLLLGYYVIVKNENSMVSSHFVNSTSLTISNLTPNVTYNVF
IYAVNKLGNSSPLVLTVVPITKASVFAFITKLGNGILVNWTTSFPANITLELYNPNGNLISQIAAIKGNSSYLFRVPQGN
YTLVIIASNSAGVSKYVYQVVYYLPPASPQVSLIGFGNNLYISWNNEANVITYLVYVNNSLVYEGPSNSIVTNISNGTYL
VKVIGVNPAGSSSPGIAVIHYTGDYVTVVKMKVVNVTIVSKIASAVSGNGNNLSLGQSIVIILLAVMILLSIAIITRNRS
NGFDW
>Mature_725_residues
MKYGNMKKWAPLILFLFSLLLLQGISLHASSPSFSVNASYLASLPYANSHVAVVYYQGSLYIIGGDSHSNQVWIYSNGTW
NIGPSLPFSLVSPSAIVYNNTIYVMGGYNSTGINPYVLKLNGNSWVVVSEMPLPAYSPYIFVYNNAIYVIGGENTTSPAG
LYFPPSNAIRLFYPNNDSWRIIGYMPVPTYGGGYVFNGTSLIIVSGYIGYSAYTNDILIYSPQNNNWTILNGVLPYWIHD
SALAYYRGVLFIVGGYIYTAGSGGVNNAILAYYNGNLQRVGYLPVPVYSAGYVQVGNMLYLAGGIGSSLSDVSALQLITF
NFPPLPPKITSYSAGNESVTLGWNPVRLSSGYEIIYWNNMGFNSSINVGNVTSYTVTGLKDGITYYFEVLAYNSIGYSSP
SSIIALTPASVPNPPQLVSVKYGNDNVTLNWLPPTFSGGYLLLGYYVIVKNENSMVSSHFVNSTSLTISNLTPNVTYNVF
IYAVNKLGNSSPLVLTVVPITKASVFAFITKLGNGILVNWTTSFPANITLELYNPNGNLISQIAAIKGNSSYLFRVPQGN
YTLVIIASNSAGVSKYVYQVVYYLPPASPQVSLIGFGNNLYISWNNEANVITYLVYVNNSLVYEGPSNSIVTNISNGTYL
VKVIGVNPAGSSSPGIAVIHYTGDYVTVVKMKVVNVTIVSKIASAVSGNGNNLSLGQSIVIILLAVMILLSIAIITRNRS
NGFDW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 Kelch repeats

Homologues:

Organism=Homo sapiens, GI291045225, Length=206, Percent_Identity=31.5533980582524, Blast_Score=80, Evalue=8e-15,
Organism=Homo sapiens, GI291045230, Length=206, Percent_Identity=31.5533980582524, Blast_Score=80, Evalue=9e-15,
Organism=Homo sapiens, GI291045228, Length=206, Percent_Identity=31.5533980582524, Blast_Score=80, Evalue=9e-15,
Organism=Homo sapiens, GI291045223, Length=206, Percent_Identity=31.5533980582524, Blast_Score=80, Evalue=9e-15,
Organism=Homo sapiens, GI140560917, Length=218, Percent_Identity=27.0642201834862, Blast_Score=70, Evalue=1e-11,
Organism=Homo sapiens, GI140560919, Length=218, Percent_Identity=28.4403669724771, Blast_Score=69, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193207037, Length=197, Percent_Identity=26.9035532994924, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32565889, Length=197, Percent_Identity=26.9035532994924, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32565886, Length=197, Percent_Identity=26.9035532994924, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281359561, Length=407, Percent_Identity=24.3243243243243, Blast_Score=67, Evalue=6e-11,
Organism=Drosophila melanogaster, GI281359563, Length=407, Percent_Identity=24.3243243243243, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI45552151, Length=407, Percent_Identity=24.3243243243243, Blast_Score=66, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1033_SULSO (Q97Z97)

Other databases:

- EMBL:   AE006641
- PIR:   A90255
- RefSeq:   NP_342506.1
- ProteinModelPortal:   Q97Z97
- GeneID:   1454075
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO1033
- NMPDR:   fig|273057.1.peg.929
- HOGENOM:   HBG705388
- OMA:   TINVGNV
- ProtClustDB:   CLSK268089
- BioCyc:   SSOL273057:SSO1033-MONOMER
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR011043
- InterPro:   IPR015916
- InterPro:   IPR013783
- InterPro:   IPR013089
- InterPro:   IPR006652
- Gene3D:   G3DSA:2.130.10.80
- Gene3D:   G3DSA:2.60.40.10
- PANTHER:   PTHR23230
- SMART:   SM00060
- SMART:   SM00612

Pfam domain/function: PF00041 fn3; SSF49265 FN_III-like; SSF50965 Gal_oxid_central

EC number: NA

Molecular weight: Translated: 78466; Mature: 78466

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYGNMKKWAPLILFLFSLLLLQGISLHASSPSFSVNASYLASLPYANSHVAVVYYQGSL
CCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCEEECHHHEEECCCCCCCEEEEEECCEE
YIIGGDSHSNQVWIYSNGTWNIGPSLPFSLVSPSAIVYNNTIYVMGGYNSTGINPYVLKL
EEEECCCCCCEEEEEECCEEECCCCCCHHHCCCCEEEEECEEEEEECCCCCCCCEEEEEE
NGNSWVVVSEMPLPAYSPYIFVYNNAIYVIGGENTTSPAGLYFPPSNAIRLFYPNNDSWR
CCCCEEEEECCCCCCCCCEEEEECCEEEEEECCCCCCCCEEEECCCCCEEEEECCCCCEE
IIGYMPVPTYGGGYVFNGTSLIIVSGYIGYSAYTNDILIYSPQNNNWTILNGVLPYWIHD
EEEEEECCCCCCCEEECCEEEEEEEEECCCEEEECCEEEECCCCCCEEEEECCCCEEEEC
SALAYYRGVLFIVGGYIYTAGSGGVNNAILAYYNGNLQRVGYLPVPVYSAGYVQVGNMLY
CHHHHHCEEEEEEEEEEEECCCCCCCCCEEEEECCCEEEEEEECCCCCCCCEEEECCEEE
LAGGIGSSLSDVSALQLITFNFPPLPPKITSYSAGNESVTLGWNPVRLSSGYEIIYWNNM
EECCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCCEEEECCCEEEECCCEEEEEECCC
GFNSSINVGNVTSYTVTGLKDGITYYFEVLAYNSIGYSSPSSIIALTPASVPNPPQLVSV
CCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEE
KYGNDNVTLNWLPPTFSGGYLLLGYYVIVKNENSMVSSHFVNSTSLTISNLTPNVTYNVF
EECCCEEEEEEECCCCCCCEEEEEEEEEEECCCCEEEHEEECCCEEEEECCCCCCEEEEE
IYAVNKLGNSSPLVLTVVPITKASVFAFITKLGNGILVNWTTSFPANITLELYNPNGNLI
EEEEECCCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCE
SQIAAIKGNSSYLFRVPQGNYTLVIIASNSAGVSKYVYQVVYYLPPASPQVSLIGFGNNL
EEEEEEECCCEEEEEECCCCEEEEEEECCCCCHHHHEEEEEEECCCCCCCEEEEEECCEE
YISWNNEANVITYLVYVNNSLVYEGPSNSIVTNISNGTYLVKVIGVNPAGSSSPGIAVIH
EEEECCCCCEEEEEEEECCEEEEECCCCCEEEEECCCEEEEEEEEECCCCCCCCCEEEEE
YTGDYVTVVKMKVVNVTIVSKIASAVSGNGNNLSLGQSIVIILLAVMILLSIAIITRNRS
EECCEEEEEEEEEEEEEEHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHEEEEEEECCC
NGFDW
CCCCC
>Mature Secondary Structure
MKYGNMKKWAPLILFLFSLLLLQGISLHASSPSFSVNASYLASLPYANSHVAVVYYQGSL
CCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCEEECHHHEEECCCCCCCEEEEEECCEE
YIIGGDSHSNQVWIYSNGTWNIGPSLPFSLVSPSAIVYNNTIYVMGGYNSTGINPYVLKL
EEEECCCCCCEEEEEECCEEECCCCCCHHHCCCCEEEEECEEEEEECCCCCCCCEEEEEE
NGNSWVVVSEMPLPAYSPYIFVYNNAIYVIGGENTTSPAGLYFPPSNAIRLFYPNNDSWR
CCCCEEEEECCCCCCCCCEEEEECCEEEEEECCCCCCCCEEEECCCCCEEEEECCCCCEE
IIGYMPVPTYGGGYVFNGTSLIIVSGYIGYSAYTNDILIYSPQNNNWTILNGVLPYWIHD
EEEEEECCCCCCCEEECCEEEEEEEEECCCEEEECCEEEECCCCCCEEEEECCCCEEEEC
SALAYYRGVLFIVGGYIYTAGSGGVNNAILAYYNGNLQRVGYLPVPVYSAGYVQVGNMLY
CHHHHHCEEEEEEEEEEEECCCCCCCCCEEEEECCCEEEEEEECCCCCCCCEEEECCEEE
LAGGIGSSLSDVSALQLITFNFPPLPPKITSYSAGNESVTLGWNPVRLSSGYEIIYWNNM
EECCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCCEEEECCCEEEECCCEEEEEECCC
GFNSSINVGNVTSYTVTGLKDGITYYFEVLAYNSIGYSSPSSIIALTPASVPNPPQLVSV
CCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEE
KYGNDNVTLNWLPPTFSGGYLLLGYYVIVKNENSMVSSHFVNSTSLTISNLTPNVTYNVF
EECCCEEEEEEECCCCCCCEEEEEEEEEEECCCCEEEHEEECCCEEEEECCCCCCEEEEE
IYAVNKLGNSSPLVLTVVPITKASVFAFITKLGNGILVNWTTSFPANITLELYNPNGNLI
EEEEECCCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCE
SQIAAIKGNSSYLFRVPQGNYTLVIIASNSAGVSKYVYQVVYYLPPASPQVSLIGFGNNL
EEEEEEECCCEEEEEECCCCEEEEEEECCCCCHHHHEEEEEEECCCCCCCEEEEEECCEE
YISWNNEANVITYLVYVNNSLVYEGPSNSIVTNISNGTYLVKVIGVNPAGSSSPGIAVIH
EEEECCCCCEEEEEEEECCEEEEECCCCCEEEEECCCEEEEEEEEECCCCCCCCCEEEEE
YTGDYVTVVKMKVVNVTIVSKIASAVSGNGNNLSLGQSIVIILLAVMILLSIAIITRNRS
EECCEEEEEEEEEEEEEEHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHEEEEEEECCC
NGFDW
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11427726