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The map label for this gene is ycjP [H]

Identifier: 15897877

GI number: 15897877

Start: 859006

End: 859809

Strand: Direct

Name: ycjP [H]

Synonym: SSO1001

Alternate gene names: 15897877

Gene position: 859006-859809 (Clockwise)

Preceding gene: 15897876

Following gene: 15897878

Centisome position: 28.71

GC content: 36.44

Gene sequence:

>804_bases
ATGAGGTTGTGGGTATATTTAGGTGCAATAGTAGTAGGAATTTACTTTCTATTTCCACTTTACATTTTAGTATTACTAGC
ATTTAATTCCCCAAAATATACCGTCTTAGCGAAATTCCCCTCACTATTACCGGTGTCACTAACACTAAATAATCTACTAA
CAGCATTACAAGGCACGGCATTTATTGATCCATTCATAAAAAGTCTGGAGACAGCAACATTAGTGGGGATCATTACCATA
GCATTGGCTATTCCAGCGGGATATGGTTTAAGTAGATTACCAAGAGCCATAGCATATTCCATAATTATCCTTCTATTAGT
TACTAATATGATGCCAGCAATAGTAATAGGTATTCCAATAGCAGTAGATTTTCTTAAACTTCATCTTTTTGAATCCGTAG
TAGGTCTAGCCTTAGCCCAAACACTAATAACACTACCATTAGCTACGTTCATCTTACAAGGCACGTTCTCGTCAATACCC
ATTGACCTCGAACATCAAGCTAGAGTTGATGGTGCAAATTTATTTAATAGGTTATTTTCAGTACTCTTACCACTAGCAGC
ACCTGGTATAGCAGCAGCATTCCTAATATCATGGATGTTCTCATGGGATGAGTTTACTTATGCAATCCTATTAATTCCCT
ATCACTCCACACTTCCAGTAACAATATACCAAGACGTTACCAGAGGAAACTTATTGGCAGGAATAGCATTTTCACTAATA
TTCACACTTCCCGTAATAATTTTAACTTTTGCATTACAAAAATATCTAAGAGGAGAATATCTAGCAGGGGGGATAAAAGG
ATGA

Upstream 100 bases:

>100_bases
TTTCCAGAAGTTGGATTAGCATTAGCTTCTGCAACGATACTTCTTGGATTTATCCTCGTATTTTCTGGCATAGTAATCAA
ACTCTCTGGAGGGAGATAAC

Downstream 100 bases:

>100_bases
CGGTAGAACTAATAGATATTGTAAAGAAATATGGCAAAAACATTGTAATTAATGGCATAACAGAGAAGATAGAGACTGGA
GAGTTCTTTGTAATACTAGG

Product: sugar ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MRLWVYLGAIVVGIYFLFPLYILVLLAFNSPKYTVLAKFPSLLPVSLTLNNLLTALQGTAFIDPFIKSLETATLVGIITI
ALAIPAGYGLSRLPRAIAYSIIILLLVTNMMPAIVIGIPIAVDFLKLHLFESVVGLALAQTLITLPLATFILQGTFSSIP
IDLEHQARVDGANLFNRLFSVLLPLAAPGIAAAFLISWMFSWDEFTYAILLIPYHSTLPVTIYQDVTRGNLLAGIAFSLI
FTLPVIILTFALQKYLRGEYLAGGIKG

Sequences:

>Translated_267_residues
MRLWVYLGAIVVGIYFLFPLYILVLLAFNSPKYTVLAKFPSLLPVSLTLNNLLTALQGTAFIDPFIKSLETATLVGIITI
ALAIPAGYGLSRLPRAIAYSIIILLLVTNMMPAIVIGIPIAVDFLKLHLFESVVGLALAQTLITLPLATFILQGTFSSIP
IDLEHQARVDGANLFNRLFSVLLPLAAPGIAAAFLISWMFSWDEFTYAILLIPYHSTLPVTIYQDVTRGNLLAGIAFSLI
FTLPVIILTFALQKYLRGEYLAGGIKG
>Mature_267_residues
MRLWVYLGAIVVGIYFLFPLYILVLLAFNSPKYTVLAKFPSLLPVSLTLNNLLTALQGTAFIDPFIKSLETATLVGIITI
ALAIPAGYGLSRLPRAIAYSIIILLLVTNMMPAIVIGIPIAVDFLKLHLFESVVGLALAQTLITLPLATFILQGTFSSIP
IDLEHQARVDGANLFNRLFSVLLPLAAPGIAAAFLISWMFSWDEFTYAILLIPYHSTLPVTIYQDVTRGNLLAGIAFSLI
FTLPVIILTFALQKYLRGEYLAGGIKG

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=275, Percent_Identity=27.2727272727273, Blast_Score=95, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29127; Mature: 29127

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLWVYLGAIVVGIYFLFPLYILVLLAFNSPKYTVLAKFPSLLPVSLTLNNLLTALQGTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCHH
FIDPFIKSLETATLVGIITIALAIPAGYGLSRLPRAIAYSIIILLLVTNMMPAIVIGIPI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVDFLKLHLFESVVGLALAQTLITLPLATFILQGTFSSIPIDLEHQARVDGANLFNRLFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHH
VLLPLAAPGIAAAFLISWMFSWDEFTYAILLIPYHSTLPVTIYQDVTRGNLLAGIAFSLI
HHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEHHCCCCHHHHHHHHHHH
FTLPVIILTFALQKYLRGEYLAGGIKG
HHHHHHHHHHHHHHHHCCHHHCCCCCC
>Mature Secondary Structure
MRLWVYLGAIVVGIYFLFPLYILVLLAFNSPKYTVLAKFPSLLPVSLTLNNLLTALQGTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCHH
FIDPFIKSLETATLVGIITIALAIPAGYGLSRLPRAIAYSIIILLLVTNMMPAIVIGIPI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVDFLKLHLFESVVGLALAQTLITLPLATFILQGTFSSIPIDLEHQARVDGANLFNRLFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHH
VLLPLAAPGIAAAFLISWMFSWDEFTYAILLIPYHSTLPVTIYQDVTRGNLLAGIAFSLI
HHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEHHCCCCHHHHHHHHHHH
FTLPVIILTFALQKYLRGEYLAGGIKG
HHHHHHHHHHHHHHHHCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]