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The map label for this gene is sufB [H]

Identifier: 15897812

GI number: 15897812

Start: 786874

End: 788313

Strand: Direct

Name: sufB [H]

Synonym: SSO0927

Alternate gene names: 15897812

Gene position: 786874-788313 (Clockwise)

Preceding gene: 15897811

Following gene: 15897813

Centisome position: 26.3

GC content: 37.29

Gene sequence:

>1440_bases
ATGCAAGAAGATAAAATATCATTAGATCTACATGAGATAATAAACGCTACCATAGATGCCAAGTACAATAAGCTTAATCA
GCTAGAATTTCACAGAAGAATAGTAGAATCCGGACTAAGTAGATCTACAATTGAGGAAATTTCTAGAATAAAAAAAGAAC
CAGAATGGATGTTAAAATTAAGATTAAAGGGCTTAGAATTATTTGAAAAATTACCCACACCAAATTGGTTACCAGATGTT
TTATCGAGTTTAGACATTTCAGCGTTAGAACTTTACGTTAAACCTGGTGTTGATAAAGCCCAAAGCTGGGAAGAACTACC
ACCAGAAATAAGAAAATATTACGATGAGTTAGGTATACCTGAAAGTGAGAAAAAGTTCCTAGGAGGTCTCGTGGCAGTAT
TAGAGTCAGAACCAATCTATTCTAATGTTAAAATTGAGCTAATGAAAAAAGGAGTAGTAATGCTTCCAATAGATGAGGCT
GTGAGCAAATATCCAGATCTTATGAAGGAGTACTTTATGAAAATATTTCCAGCCTCTGATCACAAATTTGCGGCTTTACA
TGGTGCATTATGGAGTGGAGGCGTATTTGTCTACGTTCCGAAGAATGTAAAGATAACAACACCAGTTGAAGGATTCTTCG
TAATAGGATCAGAGCTTGAAGGACAATTTGAGCACACTCTATTAATAGCCGATGAGGGATCATATATTCACTTTATTGAG
GGCTGTACAGCGCCACAACTCAAAAAGTACTCATTCCATGATGGTATGGTAGAATTATACGCCAAAAAGAACGCTTACAT
AAAGTTCACTACAATACAGAACTGGAGCAAAAACGTGATTAATTTCAATAATAAGAGAGCATGGGCTGATGAAAATTCAA
CCGTGGAATGGGTTGAAGGATCATTAGGTTCTAAGTACAGCTTTGTGTACCCATCAACTATCCTTAGAGGAAAGAACGCT
TCATCAACAAGCTTAGTGGTCACAATGACTAGTGGAGAAGGGGAGTGGAAAGATAGTGGTTCAAAAATGATTCACGCAGC
ACCTTATACTAAGAGCAAAGTAGTAAACAAAAACATAGGTTTTAACGGCGGTGTGAATGTTTATAGAGGATTAGTTAAAG
TGAATAAAGGAGCAGTAGGTTCTAAGGCATTTGTGAAATGTGATTCCCTAATGCTCGATGACAAAACTAAGGCCTATACA
TATCCACACAATCAAGTATTGGAAGAAGATGCAGATGTAGGGCATGAAGCCCACACATTCAGAATGAACGAGGATCAGCT
CTTCTATCTAATGACAAGGGGTATAGACGAGAAAGAGGCCACCTCAATGCTAGTATTAGGGTTCATAGACGAAATCATGA
AAGAGCTACCATTTGAGTACGCTACCATGCTAAATAAGGTTATAAAGTTGGAATTAGATAAGCTAGGTGCAGTGGCTTAA

Upstream 100 bases:

>100_bases
AAGGATATGAAGCGGTTCTAGAGAGGAATTCATAAGTTAATTTTTTATTAAAGATAGACTTATATTCATCTTTAACAGAG
TTAAAGAATAGGTTATAAGT

Downstream 100 bases:

>100_bases
GTTGGGAGTAGTCGATATACAGTTAGCAAAAAAAGTAATTAATGAAAATTTTACACAAGATAAAGGAGAGAGGGAAAAAG
CATTTTCCTTGTACCTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MQEDKISLDLHEIINATIDAKYNKLNQLEFHRRIVESGLSRSTIEEISRIKKEPEWMLKLRLKGLELFEKLPTPNWLPDV
LSSLDISALELYVKPGVDKAQSWEELPPEIRKYYDELGIPESEKKFLGGLVAVLESEPIYSNVKIELMKKGVVMLPIDEA
VSKYPDLMKEYFMKIFPASDHKFAALHGALWSGGVFVYVPKNVKITTPVEGFFVIGSELEGQFEHTLLIADEGSYIHFIE
GCTAPQLKKYSFHDGMVELYAKKNAYIKFTTIQNWSKNVINFNNKRAWADENSTVEWVEGSLGSKYSFVYPSTILRGKNA
SSTSLVVTMTSGEGEWKDSGSKMIHAAPYTKSKVVNKNIGFNGGVNVYRGLVKVNKGAVGSKAFVKCDSLMLDDKTKAYT
YPHNQVLEEDADVGHEAHTFRMNEDQLFYLMTRGIDEKEATSMLVLGFIDEIMKELPFEYATMLNKVIKLELDKLGAVA

Sequences:

>Translated_479_residues
MQEDKISLDLHEIINATIDAKYNKLNQLEFHRRIVESGLSRSTIEEISRIKKEPEWMLKLRLKGLELFEKLPTPNWLPDV
LSSLDISALELYVKPGVDKAQSWEELPPEIRKYYDELGIPESEKKFLGGLVAVLESEPIYSNVKIELMKKGVVMLPIDEA
VSKYPDLMKEYFMKIFPASDHKFAALHGALWSGGVFVYVPKNVKITTPVEGFFVIGSELEGQFEHTLLIADEGSYIHFIE
GCTAPQLKKYSFHDGMVELYAKKNAYIKFTTIQNWSKNVINFNNKRAWADENSTVEWVEGSLGSKYSFVYPSTILRGKNA
SSTSLVVTMTSGEGEWKDSGSKMIHAAPYTKSKVVNKNIGFNGGVNVYRGLVKVNKGAVGSKAFVKCDSLMLDDKTKAYT
YPHNQVLEEDADVGHEAHTFRMNEDQLFYLMTRGIDEKEATSMLVLGFIDEIMKELPFEYATMLNKVIKLELDKLGAVA
>Mature_479_residues
MQEDKISLDLHEIINATIDAKYNKLNQLEFHRRIVESGLSRSTIEEISRIKKEPEWMLKLRLKGLELFEKLPTPNWLPDV
LSSLDISALELYVKPGVDKAQSWEELPPEIRKYYDELGIPESEKKFLGGLVAVLESEPIYSNVKIELMKKGVVMLPIDEA
VSKYPDLMKEYFMKIFPASDHKFAALHGALWSGGVFVYVPKNVKITTPVEGFFVIGSELEGQFEHTLLIADEGSYIHFIE
GCTAPQLKKYSFHDGMVELYAKKNAYIKFTTIQNWSKNVINFNNKRAWADENSTVEWVEGSLGSKYSFVYPSTILRGKNA
SSTSLVVTMTSGEGEWKDSGSKMIHAAPYTKSKVVNKNIGFNGGVNVYRGLVKVNKGAVGSKAFVKCDSLMLDDKTKAYT
YPHNQVLEEDADVGHEAHTFRMNEDQLFYLMTRGIDEKEATSMLVLGFIDEIMKELPFEYATMLNKVIKLELDKLGAVA

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=457, Percent_Identity=34.7921225382932, Blast_Score=311, Evalue=8e-86,
Organism=Escherichia coli, GI1787971, Length=145, Percent_Identity=25.5172413793103, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 54178; Mature: 54178

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEDKISLDLHEIINATIDAKYNKLNQLEFHRRIVESGLSRSTIEEISRIKKEPEWMLKL
CCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHH
RLKGLELFEKLPTPNWLPDVLSSLDISALELYVKPGVDKAQSWEELPPEIRKYYDELGIP
HHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHCCC
ESEKKFLGGLVAVLESEPIYSNVKIELMKKGVVMLPIDEAVSKYPDLMKEYFMKIFPASD
CHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCC
HKFAALHGALWSGGVFVYVPKNVKITTPVEGFFVIGSELEGQFEHTLLIADEGSYIHFIE
CCEEEEHHHHHCCCEEEEECCCEEEECCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEE
GCTAPQLKKYSFHDGMVELYAKKNAYIKFTTIQNWSKNVINFNNKRAWADENSTVEWVEG
CCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCEECCCCEECCCCCCEEEEEEC
SLGSKYSFVYPSTILRGKNASSTSLVVTMTSGEGEWKDSGSKMIHAAPYTKSKVVNKNIG
CCCCEEEEECCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCHHHHCCCCCC
FNGGVNVYRGLVKVNKGAVGSKAFVKCDSLMLDDKTKAYTYPHNQVLEEDADVGHEAHTF
CCCCHHHHHHHHHCCCCCCCCCHHEEECCEEECCCCCEEECCCHHHHHHHHCCCCCCEEE
RMNEDQLFYLMTRGIDEKEATSMLVLGFIDEIMKELPFEYATMLNKVIKLELDKLGAVA
EECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQEDKISLDLHEIINATIDAKYNKLNQLEFHRRIVESGLSRSTIEEISRIKKEPEWMLKL
CCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHH
RLKGLELFEKLPTPNWLPDVLSSLDISALELYVKPGVDKAQSWEELPPEIRKYYDELGIP
HHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHCCC
ESEKKFLGGLVAVLESEPIYSNVKIELMKKGVVMLPIDEAVSKYPDLMKEYFMKIFPASD
CHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCC
HKFAALHGALWSGGVFVYVPKNVKITTPVEGFFVIGSELEGQFEHTLLIADEGSYIHFIE
CCEEEEHHHHHCCCEEEEECCCEEEECCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEE
GCTAPQLKKYSFHDGMVELYAKKNAYIKFTTIQNWSKNVINFNNKRAWADENSTVEWVEG
CCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCEECCCCEECCCCCCEEEEEEC
SLGSKYSFVYPSTILRGKNASSTSLVVTMTSGEGEWKDSGSKMIHAAPYTKSKVVNKNIG
CCCCEEEEECCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCHHHHCCCCCC
FNGGVNVYRGLVKVNKGAVGSKAFVKCDSLMLDDKTKAYTYPHNQVLEEDADVGHEAHTF
CCCCHHHHHHHHHCCCCCCCCCHHEEECCEEECCCCCEEECCCHHHHHHHHCCCCCCEEE
RMNEDQLFYLMTRGIDEKEATSMLVLGFIDEIMKELPFEYATMLNKVIKLELDKLGAVA
EECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]