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The map label for this gene is glcD [H]

Identifier: 15897691

GI number: 15897691

Start: 671864

End: 672922

Strand: Direct

Name: glcD [H]

Synonym: SSO0788

Alternate gene names: 15897691

Gene position: 671864-672922 (Clockwise)

Preceding gene: 15897689

Following gene: 15897692

Centisome position: 22.45

GC content: 36.45

Gene sequence:

>1059_bases
TTGAAATTATGTGATGAGTATAGAATTCCATTAGTGCCAAGAGGTGCGGGGACTTCTACTATAGGGCAAGTCCTTCCTAT
TTACTCCTCAATTATATTAGACATGAATGATATGAAGGAGGTTATAGAGATTGATGACAAATGGGTTAAGGTCACTCCCA
GCGTGAAGATTTTAAGGACTTTAGATTACTTAAGGAGAAGGGGGAAGGAGTTAAGGGTTTACCCTAGTAGTTTTTACATC
GCGACATTAGGGGGATACATAGCCGGAGGAGATGTTGGTATTGGATCCTTCCAGTACGGTTATCATTTCGATAATAACGG
TATTAATTCCGTGAGAGTTTTAGGAGTCACCGGTAAGTATACTTTAAATGGAAAGGACACTTTAGCAGTGGCTCAAGCAG
CAGGTACTACTGGAGTTATAACTGAGGCGGAATTGGCGATAATAGACTATGAAGACTGGAAAGATCAATTAATAAGGTTA
AATGATTTAGAAGAGGTAGTGAAGATTTTAAAGAAGTTAGGAGAGTTTAGGAGTAAAATTAGGAGAATCACAGTAGAGGA
TTATGAGGCATTATCCTTAGTTGGGAAGGATAGGTTAGATAAAGTAGGGAAGTGGAACGTTATAGTAGCGAGTACTTTAA
GCTTCGGAGAGGAGGTTAATTTGAGGTTTTTAGATGAGTTAGCTTTCGCTGCTATTTACGTTACGATGAGTAAGCTGACT
AAATTTAAGGATTACTTTTACGAGGTTAGGTTGCTTTCTTTGGATAGCTTTCTGAGGGTTGTTAAACAAGTTAAAGAAGC
TCTAAACTCTAACGTTTTAATACACGGTGATGTAATGACTTTAAGAGGTGAAATAATAATTTATACTGTATTTATTTCTG
ATAAATCAAATTTTGAAATAATAGACTCGATAATGCTAAAGGAAGGGATACCGTTTGAAATACACTCAATAGAGGTAAAC
GATAGGGTTGATGAGGAATATAGACTTGAATTAATGAAGAAATACAAGCGAATTATGGATCCACATAATATTCTGAATCC
AGGGAAGTTGAGACTATGA

Upstream 100 bases:

>100_bases
TCTTGTGTTGAAATAAGCCGATTTTTCTAACTCCGCTCTGATATTTTTCTCTTCCATAGAAATTGTATCATTTTGAGTAA
AATTGGTGAAACACCACTGA

Downstream 100 bases:

>100_bases
TGCTTAAATCATTAATTGATGCTATAGAAATACTCGAATCTAAGGACCCTTTAAATCTACTGAGAAGTAAATTAAAGGGT
GTGGAGTACGAAGAAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKLCDEYRIPLVPRGAGTSTIGQVLPIYSSIILDMNDMKEVIEIDDKWVKVTPSVKILRTLDYLRRRGKELRVYPSSFYI
ATLGGYIAGGDVGIGSFQYGYHFDNNGINSVRVLGVTGKYTLNGKDTLAVAQAAGTTGVITEAELAIIDYEDWKDQLIRL
NDLEEVVKILKKLGEFRSKIRRITVEDYEALSLVGKDRLDKVGKWNVIVASTLSFGEEVNLRFLDELAFAAIYVTMSKLT
KFKDYFYEVRLLSLDSFLRVVKQVKEALNSNVLIHGDVMTLRGEIIIYTVFISDKSNFEIIDSIMLKEGIPFEIHSIEVN
DRVDEEYRLELMKKYKRIMDPHNILNPGKLRL

Sequences:

>Translated_352_residues
MKLCDEYRIPLVPRGAGTSTIGQVLPIYSSIILDMNDMKEVIEIDDKWVKVTPSVKILRTLDYLRRRGKELRVYPSSFYI
ATLGGYIAGGDVGIGSFQYGYHFDNNGINSVRVLGVTGKYTLNGKDTLAVAQAAGTTGVITEAELAIIDYEDWKDQLIRL
NDLEEVVKILKKLGEFRSKIRRITVEDYEALSLVGKDRLDKVGKWNVIVASTLSFGEEVNLRFLDELAFAAIYVTMSKLT
KFKDYFYEVRLLSLDSFLRVVKQVKEALNSNVLIHGDVMTLRGEIIIYTVFISDKSNFEIIDSIMLKEGIPFEIHSIEVN
DRVDEEYRLELMKKYKRIMDPHNILNPGKLRL
>Mature_352_residues
MKLCDEYRIPLVPRGAGTSTIGQVLPIYSSIILDMNDMKEVIEIDDKWVKVTPSVKILRTLDYLRRRGKELRVYPSSFYI
ATLGGYIAGGDVGIGSFQYGYHFDNNGINSVRVLGVTGKYTLNGKDTLAVAQAAGTTGVITEAELAIIDYEDWKDQLIRL
NDLEEVVKILKKLGEFRSKIRRITVEDYEALSLVGKDRLDKVGKWNVIVASTLSFGEEVNLRFLDELAFAAIYVTMSKLT
KFKDYFYEVRLLSLDSFLRVVKQVKEALNSNVLIHGDVMTLRGEIIIYTVFISDKSNFEIIDSIMLKEGIPFEIHSIEVN
DRVDEEYRLELMKKYKRIMDPHNILNPGKLRL

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 40113; Mature: 40113

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLCDEYRIPLVPRGAGTSTIGQVLPIYSSIILDMNDMKEVIEIDDKWVKVTPSVKILRT
CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECCCHHHHHH
LDYLRRRGKELRVYPSSFYIATLGGYIAGGDVGIGSFQYGYHFDNNGINSVRVLGVTGKY
HHHHHHCCCEEEEECCCEEEEECCCEEECCCCCCCCEEECEEECCCCCCEEEEEEEEEEE
TLNGKDTLAVAQAAGTTGVITEAELAIIDYEDWKDQLIRLNDLEEVVKILKKLGEFRSKI
EECCCCCEEEEECCCCCCCEEECEEEEEECCCHHHHHEECCCHHHHHHHHHHHHHHHHHH
RRITVEDYEALSLVGKDRLDKVGKWNVIVASTLSFGEEVNLRFLDELAFAAIYVTMSKLT
HEECCCHHHHHHHHCHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
KFKDYFYEVRLLSLDSFLRVVKQVKEALNSNVLIHGDVMTLRGEIIIYTVFISDKSNFEI
HHHHHHHHHHEECHHHHHHHHHHHHHHHCCCEEEEECEEEEECCEEEEEEEEECCCCHHH
IDSIMLKEGIPFEIHSIEVNDRVDEEYRLELMKKYKRIMDPHNILNPGKLRL
HHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLCDEYRIPLVPRGAGTSTIGQVLPIYSSIILDMNDMKEVIEIDDKWVKVTPSVKILRT
CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECCCHHHHHH
LDYLRRRGKELRVYPSSFYIATLGGYIAGGDVGIGSFQYGYHFDNNGINSVRVLGVTGKY
HHHHHHCCCEEEEECCCEEEEECCCEEECCCCCCCCEEECEEECCCCCCEEEEEEEEEEE
TLNGKDTLAVAQAAGTTGVITEAELAIIDYEDWKDQLIRLNDLEEVVKILKKLGEFRSKI
EECCCCCEEEEECCCCCCCEEECEEEEEECCCHHHHHEECCCHHHHHHHHHHHHHHHHHH
RRITVEDYEALSLVGKDRLDKVGKWNVIVASTLSFGEEVNLRFLDELAFAAIYVTMSKLT
HEECCCHHHHHHHHCHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
KFKDYFYEVRLLSLDSFLRVVKQVKEALNSNVLIHGDVMTLRGEIIIYTVFISDKSNFEI
HHHHHHHHHHEECHHHHHHHHHHHHHHHCCCEEEEECEEEEECCEEEEEEEEECCCCHHH
IDSIMLKEGIPFEIHSIEVNDRVDEEYRLELMKKYKRIMDPHNILNPGKLRL
HHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]