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The map label for this gene is 15897681

Identifier: 15897681

GI number: 15897681

Start: 662543

End: 663625

Strand: Direct

Name: 15897681

Synonym: SSO0779

Alternate gene names: NA

Gene position: 662543-663625 (Clockwise)

Preceding gene: 15897680

Following gene: 15897682

Centisome position: 22.14

GC content: 31.02

Gene sequence:

>1083_bases
ATGAAAAAAGAACAGATAATACAAGGGCCTTGTACAATAAAAGTTTTAGAGGGAGAGGCTAGAATACTCGGAATAGAGAT
ACAGAAAAACGATTTGTTAACAATACCATCAGATAAGACGTATACTCTTGTTTATGATGAAAATACAAGGTTAGAGACGG
ATTGTAAAAAGCTGTTAGACAATTTAAATTTAAGATGGGATGAAATAGTTGAAGAGATTATAAACACAGTAGGAGTAGTA
TTGCTTCTAGGAAATGTAGATTCCGGAAAGACTTACTTGACCAATCTATTCACCAATCTTGCCACTTCTTACTTGAAGAT
TATAGATGCAGATGTTGGGCAATCCACTTTATTTCTACCAACCTTCATAGCAGAATTAAAACCGATGAGAAAAACCCTTA
ATCTAGAGGAGCTTGGATATGATACTCTAGAATTCTTTGGAGATATAACACCTTCAACGAATCCTAGACTACATGTTCAA
AAAATATTGAGACTCTATGAAACAACACCAAAGGAAAGACTAACAGTAATAGATACTGATGGGTGGACTGTTGGACTAAA
TTCAATGTTACACAAATTCGAATTAATATACACAATTGATCCTGATTATATAATAGTATTTGATCAGAAAATAAAAGATT
CATTACCTGAAAATTATAGAAACAAAGCAATTCTTTTAAAAAGTGTAAATCTGCATAAGTCTAGATCTGAAAGAAAAGCA
AATAGAATAGCAAAATATGAGAGATATTTTAAGGAAGCAAAAAACATAAAAACCCTATCTGAAAATTTATTAGGAAAACA
AATATCAAACATTCTATACTGTGCATGGGGAGAGTATATACAATTATCAGACGAAGAACCATGTACAGACTATTATATAC
CACTTAATTTACTAAAAGGAGCATTACTAGGCATAATAGAAAATAAGAAAGTCATAGGAGCCGCCCTATTAGATGACCTA
AAAGAAAACGAAATAACAATACTAAGTAGAGTAAACAAGTTTACAGGGTTAGTTTTAGGGTATATTAGCTTAAATGATAA
ATTTGAGGAAAGAAGAATTAGATTTAGAAAATGCAAAAGCTAA

Upstream 100 bases:

>100_bases
AGAGTATAGACGAGAAGTACACAAATGCGAAATCACCCTTTAATCAGATAAAGGATAAAGACATAAGAGCAGCGTATAGT
ATAGCCTTAAGGGCATCTTC

Downstream 100 bases:

>100_bases
TTGCAATTGAAGGAATAGATGGGTCAGGCAAAACAACACTTGCGAATCTATTAAAGGAGCATCTAGAATCTAAAATGAAA
CTGAACGTGATTGTTACGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Polynucleotide kinase PF0112 [H]

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKKEQIIQGPCTIKVLEGEARILGIEIQKNDLLTIPSDKTYTLVYDENTRLETDCKKLLDNLNLRWDEIVEEIINTVGVV
LLLGNVDSGKTYLTNLFTNLATSYLKIIDADVGQSTLFLPTFIAELKPMRKTLNLEELGYDTLEFFGDITPSTNPRLHVQ
KILRLYETTPKERLTVIDTDGWTVGLNSMLHKFELIYTIDPDYIIVFDQKIKDSLPENYRNKAILLKSVNLHKSRSERKA
NRIAKYERYFKEAKNIKTLSENLLGKQISNILYCAWGEYIQLSDEEPCTDYYIPLNLLKGALLGIIENKKVIGAALLDDL
KENEITILSRVNKFTGLVLGYISLNDKFEERRIRFRKCKS

Sequences:

>Translated_360_residues
MKKEQIIQGPCTIKVLEGEARILGIEIQKNDLLTIPSDKTYTLVYDENTRLETDCKKLLDNLNLRWDEIVEEIINTVGVV
LLLGNVDSGKTYLTNLFTNLATSYLKIIDADVGQSTLFLPTFIAELKPMRKTLNLEELGYDTLEFFGDITPSTNPRLHVQ
KILRLYETTPKERLTVIDTDGWTVGLNSMLHKFELIYTIDPDYIIVFDQKIKDSLPENYRNKAILLKSVNLHKSRSERKA
NRIAKYERYFKEAKNIKTLSENLLGKQISNILYCAWGEYIQLSDEEPCTDYYIPLNLLKGALLGIIENKKVIGAALLDDL
KENEITILSRVNKFTGLVLGYISLNDKFEERRIRFRKCKS
>Mature_360_residues
MKKEQIIQGPCTIKVLEGEARILGIEIQKNDLLTIPSDKTYTLVYDENTRLETDCKKLLDNLNLRWDEIVEEIINTVGVV
LLLGNVDSGKTYLTNLFTNLATSYLKIIDADVGQSTLFLPTFIAELKPMRKTLNLEELGYDTLEFFGDITPSTNPRLHVQ
KILRLYETTPKERLTVIDTDGWTVGLNSMLHKFELIYTIDPDYIIVFDQKIKDSLPENYRNKAILLKSVNLHKSRSERKA
NRIAKYERYFKEAKNIKTLSENLLGKQISNILYCAWGEYIQLSDEEPCTDYYIPLNLLKGALLGIIENKKVIGAALLDDL
KENEITILSRVNKFTGLVLGYISLNDKFEERRIRFRKCKS

Specific function: Polynucleotide kinase that can phosphorylate the 5'- hydroxyl groups of both single-stranded RNA (ssRNA) and single- stranded DNA (ssDNA). Exhibits a strong preference for ssRNA [H]

COG id: COG1341

COG function: function code R; Predicted GTPase or GTP-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010655 [H]

Pfam domain/function: PF06807 Clp1 [H]

EC number: =2.7.1.78 [H]

Molecular weight: Translated: 41441; Mature: 41441

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEQIIQGPCTIKVLEGEARILGIEIQKNDLLTIPSDKTYTLVYDENTRLETDCKKLLD
CCCCCEECCCCEEEEEECCEEEEEEEEECCCEEECCCCCEEEEEECCCCCCHHHHHHHHH
NLNLRWDEIVEEIINTVGVVLLLGNVDSGKTYLTNLFTNLATSYLKIIDADVGQSTLFLP
CCCCCHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHH
TFIAELKPMRKTLNLEELGYDTLEFFGDITPSTNPRLHVQKILRLYETTPKERLTVIDTD
HHHHHHHHHHHHCCHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC
GWTVGLNSMLHKFELIYTIDPDYIIVFDQKIKDSLPENYRNKAILLKSVNLHKSRSERKA
CCEECHHHHHHHEEEEEEECCCEEEEECCHHHHCCCHHHCCCEEEEEECCCHHHHHHHHH
NRIAKYERYFKEAKNIKTLSENLLGKQISNILYCAWGEYIQLSDEEPCTDYYIPLNLLKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCCCCEEEEEHHHHHH
ALLGIIENKKVIGAALLDDLKENEITILSRVNKFTGLVLGYISLNDKFEERRIRFRKCKS
HHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKKEQIIQGPCTIKVLEGEARILGIEIQKNDLLTIPSDKTYTLVYDENTRLETDCKKLLD
CCCCCEECCCCEEEEEECCEEEEEEEEECCCEEECCCCCEEEEEECCCCCCHHHHHHHHH
NLNLRWDEIVEEIINTVGVVLLLGNVDSGKTYLTNLFTNLATSYLKIIDADVGQSTLFLP
CCCCCHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHH
TFIAELKPMRKTLNLEELGYDTLEFFGDITPSTNPRLHVQKILRLYETTPKERLTVIDTD
HHHHHHHHHHHHCCHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC
GWTVGLNSMLHKFELIYTIDPDYIIVFDQKIKDSLPENYRNKAILLKSVNLHKSRSERKA
CCEECHHHHHHHEEEEEEECCCEEEEECCHHHHCCCHHHCCCEEEEEECCCHHHHHHHHH
NRIAKYERYFKEAKNIKTLSENLLGKQISNILYCAWGEYIQLSDEEPCTDYYIPLNLLKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCCCCEEEEEHHHHHH
ALLGIIENKKVIGAALLDDLKENEITILSRVNKFTGLVLGYISLNDKFEERRIRFRKCKS
HHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA