| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is 15897678
Identifier: 15897678
GI number: 15897678
Start: 660962
End: 661462
Strand: Reverse
Name: 15897678
Synonym: SSO0776
Alternate gene names: NA
Gene position: 661462-660962 (Counterclockwise)
Preceding gene: 15897679
Following gene: 15897677
Centisome position: 22.11
GC content: 35.93
Gene sequence:
>501_bases TTGTCTATAGCATACGATCTTTTATTATCAATTCTCATATATCTACCTGCATTTGTCGCTAATGGAAGTGGTCCATTCAT TAAAAGGGGGACTCCAATAGATTTTGGTAAGAATTTCGTAGATGGGAGGAGACTATTTGGAGATGGGAAGACCTTTGAGG GCCTAATTGTTGCATTAACTTTCGGTACTACAGTAGGTGTTATTATATCTAAATTTTTTACAGCTGAGTGGACTCTTATA TCGTTTTTAGAGTCCTTATTCGCAATGATAGGGGATATGATTGGTGCCTTTATAAAGAGGAGACTTGGTATACCTAGGGG TGGAAGAGTTTTAGGTTTAGATCAATTAGATTTTGTCTTAGGAGCTTCTCTAATACTTGTGTTGATGCGTGTAAATATTA CGTGGTATCAGTTTTTGTTCATATGTGGATTAGCTTTCTTTTTGCATCAAGGGACAAACTACGTTGCTTATTTGCTAAAA ATTAAAAATGTCCCATGGTGA
Upstream 100 bases:
>100_bases TGCGAAAGTTCTCCGATGATGTTTTGAGGATTACTAAATCTTATATTATAGGTAACCTTAGGAGATGTAAATTTAAGATA ACTGAAAGGGGTGTAATTGG
Downstream 100 bases:
>100_bases AGTAATATCATGCCAAAAAAGTATAACAGACTTTACAACGAGGTTATAAATAGCTATGTAATTTTGATTCTAATATTTAT TTTAATTATTGGTATATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSIAYDLLLSILIYLPAFVANGSGPFIKRGTPIDFGKNFVDGRRLFGDGKTFEGLIVALTFGTTVGVIISKFFTAEWTLI SFLESLFAMIGDMIGAFIKRRLGIPRGGRVLGLDQLDFVLGASLILVLMRVNITWYQFLFICGLAFFLHQGTNYVAYLLK IKNVPW
Sequences:
>Translated_166_residues MSIAYDLLLSILIYLPAFVANGSGPFIKRGTPIDFGKNFVDGRRLFGDGKTFEGLIVALTFGTTVGVIISKFFTAEWTLI SFLESLFAMIGDMIGAFIKRRLGIPRGGRVLGLDQLDFVLGASLILVLMRVNITWYQFLFICGLAFFLHQGTNYVAYLLK IKNVPW >Mature_165_residues SIAYDLLLSILIYLPAFVANGSGPFIKRGTPIDFGKNFVDGRRLFGDGKTFEGLIVALTFGTTVGVIISKFFTAEWTLIS FLESLFAMIGDMIGAFIKRRLGIPRGGRVLGLDQLDFVLGASLILVLMRVNITWYQFLFICGLAFFLHQGTNYVAYLLKI KNVPW
Specific function: Unknown
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0290 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1356_SULIK (C4KH98)
Other databases:
- EMBL: CP001402 - RefSeq: YP_002914630.1 - GeneID: 7939867 - GenomeReviews: CP001402_GR - KEGG: sid:M164_1356 - OMA: GKTWRGT - ProtClustDB: PRK04032 - HAMAP: MF_01117 - InterPro: IPR002726
Pfam domain/function: PF01864 DUF46
EC number: NA
Molecular weight: Translated: 18484; Mature: 18353
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xb715620)-; HASH(0xd345214)-; HASH(0xd86b2b0)-; HASH(0xb43cdfc)-; HASH(0xd86b0f4)-;
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAYDLLLSILIYLPAFVANGSGPFIKRGTPIDFGKNFVDGRRLFGDGKTFEGLIVALT CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCHHHCCCCCCCCCEEEEHH FGTTVGVIISKFFTAEWTLISFLESLFAMIGDMIGAFIKRRLGIPRGGRVLGLDQLDFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHH GASLILVLMRVNITWYQFLFICGLAFFLHQGTNYVAYLLKIKNVPW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCH >Mature Secondary Structure SIAYDLLLSILIYLPAFVANGSGPFIKRGTPIDFGKNFVDGRRLFGDGKTFEGLIVALT CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCHHHCCCCCCCCCEEEEHH FGTTVGVIISKFFTAEWTLISFLESLFAMIGDMIGAFIKRRLGIPRGGRVLGLDQLDFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHH GASLILVLMRVNITWYQFLFICGLAFFLHQGTNYVAYLLKIKNVPW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA