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The map label for this gene is 15897674

Identifier: 15897674

GI number: 15897674

Start: 657259

End: 657777

Strand: Reverse

Name: 15897674

Synonym: SSO0773

Alternate gene names: NA

Gene position: 657777-657259 (Counterclockwise)

Preceding gene: 15897677

Following gene: 15897673

Centisome position: 21.98

GC content: 31.79

Gene sequence:

>519_bases
TTGATGTGGCAGAACCCAAAGGCTCTTGTAACTACAAAGCCTGGTAAAGGTCGAAAGTGTATAAATGAGATTTTGAATAG
GATACTTATAAAGGATATTGATGCTAGAGTTATAGAATATGTGCAAAACGTAGCTATTGTTTACTCAAATTTAGATTCAT
TAGTGGTTTATGGTTTACTTTTTGCTTCTCCTCCGTCTTGTGCTGAAAAAGTATATCCATTTCAGTTGATTATAAATTCC
ACCAATGAAAAGGAAATTGTTGTTAATGTAATAAATTTTATAAAAAATAAGACAAAAGATCTCAAAACATTTTACGTTCG
CTGTTATAATAGGGGAATTGACGTAAATTGTAGAGAAATTGAAATGGGAGTAGGAATAGGGCTGAAGGGTTTAATTAATG
TTGATTTTAAAGATCCTGAGGTTGTACTTCACGTTAATGTACTAAAGGAATTTGCTGGGATATCGCTTTTGAGAAAGAAT
CAAGAAAAGTTTCGGGCTACTCTCTTAGATAAAATATAA

Upstream 100 bases:

>100_bases
ATTATCATAACTCGGCGAGTGTAAACATTTGACAATCTTTTAATAGCTCTGAGTTTTACTTCGATCATAATATATTTTTT
CTTAATACAAAACCTTATAT

Downstream 100 bases:

>100_bases
GGTAATACCACTTAATTTAGATTGGGGTAAAAGTTTTGGTTTCAGCTAAGGACATACTTTCAGATAGTTTAAGATCATCT
GTATTGATAATTAAACATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MMWQNPKALVTTKPGKGRKCINEILNRILIKDIDARVIEYVQNVAIVYSNLDSLVVYGLLFASPPSCAEKVYPFQLIINS
TNEKEIVVNVINFIKNKTKDLKTFYVRCYNRGIDVNCREIEMGVGIGLKGLINVDFKDPEVVLHVNVLKEFAGISLLRKN
QEKFRATLLDKI

Sequences:

>Translated_172_residues
MMWQNPKALVTTKPGKGRKCINEILNRILIKDIDARVIEYVQNVAIVYSNLDSLVVYGLLFASPPSCAEKVYPFQLIINS
TNEKEIVVNVINFIKNKTKDLKTFYVRCYNRGIDVNCREIEMGVGIGLKGLINVDFKDPEVVLHVNVLKEFAGISLLRKN
QEKFRATLLDKI
>Mature_172_residues
MMWQNPKALVTTKPGKGRKCINEILNRILIKDIDARVIEYVQNVAIVYSNLDSLVVYGLLFASPPSCAEKVYPFQLIINS
TNEKEIVVNVINFIKNKTKDLKTFYVRCYNRGIDVNCREIEMGVGIGLKGLINVDFKDPEVVLHVNVLKEFAGISLLRKN
QEKFRATLLDKI

Specific function: Unknown

COG id: COG1818

COG function: function code R; Predicted RNA-binding protein, contains THUMP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19588; Mature: 19588

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS51165 THUMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMWQNPKALVTTKPGKGRKCINEILNRILIKDIDARVIEYVQNVAIVYSNLDSLVVYGLL
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
FASPPSCAEKVYPFQLIINSTNEKEIVVNVINFIKNKTKDLKTFYVRCYNRGIDVNCREI
HCCCCHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEE
EMGVGIGLKGLINVDFKDPEVVLHVNVLKEFAGISLLRKNQEKFRATLLDKI
EECCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMWQNPKALVTTKPGKGRKCINEILNRILIKDIDARVIEYVQNVAIVYSNLDSLVVYGLL
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
FASPPSCAEKVYPFQLIINSTNEKEIVVNVINFIKNKTKDLKTFYVRCYNRGIDVNCREI
HCCCCHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEE
EMGVGIGLKGLINVDFKDPEVVLHVNVLKEFAGISLLRKNQEKFRATLLDKI
EECCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA